Mlor019593.1
Basic Information
- Insect
- Mythimna loreyi
- Gene Symbol
- Zfy1
- Assembly
- GCA_029852875.1
- Location
- CM056796.1:20474297-20481113[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.044 3.9 9.0 1.4 3 23 255 275 254 275 0.98 2 26 0.38 34 6.0 0.1 6 23 287 305 287 305 0.95 3 26 0.041 3.6 9.1 0.0 2 23 314 336 313 336 0.94 4 26 1.5e-07 1.3e-05 26.2 1.2 2 23 358 379 358 379 0.97 5 26 1.5e-05 0.0013 19.9 2.4 1 23 385 408 385 408 0.97 6 26 0.0047 0.41 12.0 0.0 1 23 414 436 414 436 0.97 7 26 2.5e-06 0.00022 22.4 1.6 1 23 442 464 442 464 0.98 8 26 0.082 7.2 8.1 2.3 1 23 583 605 583 605 0.98 9 26 0.0015 0.14 13.6 3.8 2 23 612 634 611 634 0.92 10 26 6.4e-06 0.00056 21.1 1.2 1 23 640 662 640 662 0.98 11 26 2.4e-06 0.00021 22.4 4.4 1 23 668 690 668 690 0.98 12 26 0.00061 0.053 14.8 0.2 1 23 696 718 696 718 0.97 13 26 0.00073 0.064 14.6 1.0 1 23 724 746 724 746 0.91 14 26 0.0018 0.15 13.4 1.7 1 23 752 775 752 775 0.93 15 26 8.6 7.5e+02 1.8 0.1 2 23 837 857 837 857 0.83 16 26 0.00022 0.019 16.2 0.4 1 23 863 886 863 886 0.94 17 26 1e-06 9e-05 23.6 3.5 1 23 892 914 892 914 0.97 18 26 0.00016 0.014 16.6 0.1 1 23 920 942 920 942 0.98 19 26 0.0004 0.035 15.4 0.0 2 23 948 969 947 969 0.95 20 26 0.0017 0.15 13.5 0.6 6 23 979 996 979 996 0.99 21 26 0.011 0.99 10.8 0.7 2 23 1245 1267 1245 1267 0.96 22 26 1.2e-05 0.0011 20.2 2.5 1 23 1273 1295 1273 1295 0.97 23 26 0.00012 0.01 17.1 4.6 1 23 1301 1323 1301 1323 0.99 24 26 0.034 3 9.3 0.7 3 23 1331 1351 1329 1351 0.96 25 26 9.5e-05 0.0084 17.4 2.5 1 23 1357 1379 1357 1379 0.96 26 26 0.00016 0.014 16.7 0.9 1 23 1384 1407 1384 1407 0.96
Sequence Information
- Coding Sequence
- atgaataatgaaaCCGAACATATATTCTTACTAAATCCTGCCCCGAGTGAGCCTCCGGCCCCTACACAGGGAATGGTTGCCCTGGAACCGCCACCCATCTCACAAGTTAACCTTGACAaTGTCAAAGACTTTTCGCATGTGTGTCGGACATGTGCCACAATTACAGAGTTTGTCATGCCTATATTTGCTGATGAAGGACTGCAGAACAACTTGGCTgataaaatacacaaacactTACCAATAAAGGTATGCAAAGGTGATGAGCTGCCATTGGTGGTATGCTACCAGTGCGCCAGCACGCTGCTGGCCTGGCATGAGCTGGTGCAGTGCTGCATGCAGGCCGACGCCGCGTTGCGCGCCAAGCTGCGCTCCAACCAACGGaaaataaatCGGCCTAATAGTAAACCAAGTACAAGTATAGAAGAGGAAACAGAAAGCAAACACTGCCACGCGTGCTCCTCTTGCAGGTTGTTTTACACGAGCGTCCGGAACGCTCTCGTTGACTTCCATATCGATCTGGACGAGGAAGATGCCGACGTGGCCATTGTATGCCAGAAGTGCGCGCAGGTTCCCGCACTGACCGGTGTGCACAGCCTCGCCGACCATATCAGACAGGACCACTTTCCTGAGCTCCTCGACAATTCTGTCAAAACATTCATCAATGATTACGTAACTTTTGTACAAGCACTAGCTGACGATTCTGACAGAGAAACTGTGTCAGATATTAAAGAGACATCTCCGATAGTTCTGCCGGCCTTGCTCTGTCCGTTCTGTTCGAGCGTGTTCTCGTCAGCCACGCGGCTGGTGCACCATCTGAACAAGCACGTGGAAGTGAACACAGCGGACGGCGTCATGTGCTGCGACCTCGTCTACAGCGACAAGAAACTCTTCGTGCGACACTTGCAGGAGGAACACGTTGAGCAGAGAACCGACGACTCCGTGTGCGTCAACTGCGGCTTCACGGCTGAGACGTGGGAGGAGCTGAAGGAACATTACAGAGATGCGCATAACGATGTTAAAACGAAACAGCGGAAAGCAGAGAGTGCGAACAACCAGAAGTACATCCCAGCGGTGTGCCCCGAGTGCAACAAGACGTTCTCCAACAAGTACAACATGTTCGCGCACATGCGCCGCCACGCGCGCACCGCGCTCTACCCGTGCGACAAGTGCTCCAAGACCTACCGCAACCAGGGGAACCTCACCCATCACAAGAAGATTGCGCACCAGGGGAAGCTGGAGTTCATATGCGTCGAGTGCGGCGAAGCCTTCCCCCGCCGCTCCGAGCGCGACATCCACGCGCGCATACACTCCGGAGAGACGCCGTACAAGTGCCCGCACTGCGGCAAGGCGTTCCGCGCCAAGAACACGCTCACACAACACCTCGAGATGCACGCAGACACGCGCAAATACGAGAGCCCCTGCCACTTGCCCGAGGACACGCGCACTGCCTCCGACCTGTCCGAGCTGTCCGATGACGAACCGCTGGCCACGTTCGCCACCAGAAAGCCTTCGAGTCTCTACACGAACTTCTACCGAGCACTCGTTAACTTTAGAGATCATTTTGTTAATGATCAACACCATGAGGATTATCCGGACCTTACAGACTCGAGCGAGTCTGAGACGGAGGAGACGGACGTGGCCAGGTTCGACGACCTGTCGCAGTGCAACATGCGGCGCGACCGGCTGGACGAGCGCACGCGGCGCGAGCTCGGCGAGGTGCAGCACCGCGTCGGCAACAAGACCTACTACACGTGTCGCGTCTGCGGCAAGAACCTGAGCTCGGCGCACACGTACCTGTTCCACCAGCGCATCCACACGGGCGAGCGGCCGTGCGTGTGCCACGTGTGCGGCAAGCAGTTCCGCGCGCCGCACGGCCTGACGCGCCACCTCACCGAGACACACGAGCGCGTGCGCCGCTACAACTGCGATCTCTGCACCAAAAACTTCGCCAACTCGCAGAACCTCAAGCAGCACTTACGGATCCACACCGGAGAGAAGCCTTTCGTGTGTTCTCATTGTGGGAAGAGATTTACGCAGAGCGGTTCCTTGCACGTGCATCTCAAGACTCACAGTGAACAGTTCCCTTATGATTGCGCGGAGTGTGGCGCTAAGTTCAGACTGCGGTCGGGGCTGGTGCGGCACCGTCTGAAGCACACGGGCGAGCGGCCGCACGTGTGCGCCACGTGCGGCAAGGGCTTCCGTCAGCGCCACGAGCTGAGCGCGCACAGCGCGGCGCAcagcggcgcggcgccgcaCGCGTGCGCGGCGTGCCCGCGCGCCTTCCGCCAGCGCCGCGCGCTGCGCCACCACGTGCGGCGCGTGCACGACGCCGAaccgcccgccgccgccgcgcggcTCTACAACCATTATCATTACACCGATCCCATCCTTTCCCTTTCCAGGACGGTATTGCCTGAGGAAGAAAACTCGCAAGAAGATGATAAAACGAAAATAGAGATCATCGAGAAGCCAGAGTTTACGATAAGCGAGAACGGCAAGCGATACGCGAAGTGTGGCGTGTGCCAGAAGAGCGTGTCGGTGGGCGGCTGGGCGCGGCACGCGCGCGCGCACCGCGGCGAGCGGCGCCACAGCTGCCACGCGTGCGGGCTCGCCTTCAACGACAGCGGCAACCTGGCGCGCCACGCTCGCGCCGTACACTCCCAGCAGCGCCCGCACGAGTGCCCCACCTGCCCCAAGACGTTCTCACGGAAATCTCACTTAGAAGATCATGTCAAATCACACTCTGAAAGCAGAACATTTGTCTGTGATATTTGCGGGAAGGGCTCCAAGTCGGGCGCGGCGCTGCGCATGCACCTGCGCACGCACGGCGCGCGGCGCCTGCCGTGCGTGCAGTGCGGCGCGCGCTTCAAGCGGCGCGGCGAGCTGCGCGCGCACGTGGCCGTGCACACGGGCGAGCGGCCGCACGCCTGCCCCTGCGGCAAGAGCTTCCGCCTGCGCACGCAGCTCACCGCGCACACGAGAGTGCACCAGAAGGCGCAGCTGGACCAAATGGAACAGCTAAACAACGATAGCAATGTACCGGCGGCGCAGTGCTTGTGCCGCGCGTGCGTGTGCTGCGGCGCGTGGCACGCGGCCGCGCAGCGCGCCCCCAGAGTCGCGCGCGGGGACCACGCGGCCTACCACTGTCTGCGTCTAGACACGCACCACACCACCAACAAACTTCAAAAAGAACACCTCAGCTCCAGCCCAGTTCCTCCCACTCAGGCTACTCCACAATCCACATCAAAAACAGAAACTAAACCACCAGATAAAACCGACAACAAAAAGACTTCAGCGGTCACCAGGACCAGGACAAGTGTCCAAGAGAACGAGTTCTCCGACCACAGCGACATGGACGACTTCGGTCCTCTGCCCGAGTCAGTGTTCGAAGCTATCGAAGACACACAAGACAGCCAGCTATTACAAGATAATTCCAATCCAACGCCAGAGAATGAGCGACTCGATGACGAATCAAATAAATCTTGCCAACtagaaaacaaaaattcaagTGATTCGGCCCAgtgtttagaaaataataataactttacaaatatttgttcagtaGTTGACGAACCTATGGATGTAAATACCTGTGCACAAAATGTGAAAAAAGTAACTAACCATAGTGATACAAGCAACAACCTTGTTCTAACAGCCAACAAAACACATTCGAAAACTACCGACCATCACCCGACGGCCGAGAAAGCGAAGCGGAATCAGAACAAGTTGCGCAAGTGTCCCCTCTGTCCCAAGGAATACAAGGCTTCCTCCAGCTACTTCTACCACTTGAAGTACTTCCACAAAGGGAGCAAGGAGCACGAATGTGAAGTGTGCGGCAAGAAGTTCGGCACCCGCTCCTGTCTGACGCAGCACATGGCCGTACACTCCGCGCAGTACGACTACCAGTGTAAACAGTGCCACAAGCAGTTCAAGTCGAAGGCGAGCCTGTACATCCACGAGCAGACGCACAGCGGCAAGAAGTCGTGGGCGTGCAGCCAGTGTCCGGCGGCCTTCCGGTGGAGGACGCACCTGCTGCGGCACGTGAAGCGCCACTTGGCGGAGCGCGCGCACGCGTGCGACACGTGCGGCCGCGCCTTCAGCGTGCGCTGCGACCTGCTGCGCCACGTGCGCACGCACGCCGCCGGCTGCTACTCTTGTGACAAATGTGGACAGAAATTCGCCCAGCTGAGGTATTTGAAAGTGCACGCTATGAAGCAGCATAAGAACAATGTTAAGAAATTTAAGTAA
- Protein Sequence
- MNNETEHIFLLNPAPSEPPAPTQGMVALEPPPISQVNLDNVKDFSHVCRTCATITEFVMPIFADEGLQNNLADKIHKHLPIKVCKGDELPLVVCYQCASTLLAWHELVQCCMQADAALRAKLRSNQRKINRPNSKPSTSIEEETESKHCHACSSCRLFYTSVRNALVDFHIDLDEEDADVAIVCQKCAQVPALTGVHSLADHIRQDHFPELLDNSVKTFINDYVTFVQALADDSDRETVSDIKETSPIVLPALLCPFCSSVFSSATRLVHHLNKHVEVNTADGVMCCDLVYSDKKLFVRHLQEEHVEQRTDDSVCVNCGFTAETWEELKEHYRDAHNDVKTKQRKAESANNQKYIPAVCPECNKTFSNKYNMFAHMRRHARTALYPCDKCSKTYRNQGNLTHHKKIAHQGKLEFICVECGEAFPRRSERDIHARIHSGETPYKCPHCGKAFRAKNTLTQHLEMHADTRKYESPCHLPEDTRTASDLSELSDDEPLATFATRKPSSLYTNFYRALVNFRDHFVNDQHHEDYPDLTDSSESETEETDVARFDDLSQCNMRRDRLDERTRRELGEVQHRVGNKTYYTCRVCGKNLSSAHTYLFHQRIHTGERPCVCHVCGKQFRAPHGLTRHLTETHERVRRYNCDLCTKNFANSQNLKQHLRIHTGEKPFVCSHCGKRFTQSGSLHVHLKTHSEQFPYDCAECGAKFRLRSGLVRHRLKHTGERPHVCATCGKGFRQRHELSAHSAAHSGAAPHACAACPRAFRQRRALRHHVRRVHDAEPPAAAARLYNHYHYTDPILSLSRTVLPEEENSQEDDKTKIEIIEKPEFTISENGKRYAKCGVCQKSVSVGGWARHARAHRGERRHSCHACGLAFNDSGNLARHARAVHSQQRPHECPTCPKTFSRKSHLEDHVKSHSESRTFVCDICGKGSKSGAALRMHLRTHGARRLPCVQCGARFKRRGELRAHVAVHTGERPHACPCGKSFRLRTQLTAHTRVHQKAQLDQMEQLNNDSNVPAAQCLCRACVCCGAWHAAAQRAPRVARGDHAAYHCLRLDTHHTTNKLQKEHLSSSPVPPTQATPQSTSKTETKPPDKTDNKKTSAVTRTRTSVQENEFSDHSDMDDFGPLPESVFEAIEDTQDSQLLQDNSNPTPENERLDDESNKSCQLENKNSSDSAQCLENNNNFTNICSVVDEPMDVNTCAQNVKKVTNHSDTSNNLVLTANKTHSKTTDHHPTAEKAKRNQNKLRKCPLCPKEYKASSSYFYHLKYFHKGSKEHECEVCGKKFGTRSCLTQHMAVHSAQYDYQCKQCHKQFKSKASLYIHEQTHSGKKSWACSQCPAAFRWRTHLLRHVKRHLAERAHACDTCGRAFSVRCDLLRHVRTHAAGCYSCDKCGQKFAQLRYLKVHAMKQHKNNVKKFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01026574;
- 90% Identity
- -
- 80% Identity
- -