Mimp039534.2
Basic Information
- Insect
- Mythimna impura
- Gene Symbol
- Zfy1
- Assembly
- GCA_905147345.1
- Location
- LR990359.1:888839-895360[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.091 14 8.1 0.4 3 23 246 266 245 266 0.98 2 26 0.33 52 6.3 0.3 6 23 278 296 278 296 0.95 3 26 0.023 3.7 10.0 0.1 2 23 305 327 304 327 0.94 4 26 7.5e-08 1.2e-05 27.3 1.0 2 23 349 370 349 370 0.98 5 26 1.9e-05 0.0029 19.7 0.9 1 23 376 399 376 399 0.97 6 26 0.0052 0.82 12.0 0.0 1 23 405 427 405 427 0.97 7 26 8.6e-06 0.0013 20.8 2.9 1 23 433 455 433 455 0.98 8 26 3 4.7e+02 3.3 3.4 1 23 574 596 574 596 0.95 9 26 0.0015 0.23 13.8 3.7 2 23 603 625 602 625 0.92 10 26 7.1e-06 0.0011 21.0 1.2 1 23 631 653 631 653 0.98 11 26 2.6e-06 0.00041 22.4 4.4 1 23 659 681 659 681 0.98 12 26 0.00025 0.039 16.2 0.2 1 23 687 709 687 709 0.98 13 26 0.00081 0.13 14.6 1.0 1 23 715 737 715 737 0.91 14 26 0.002 0.31 13.4 1.7 1 23 743 766 743 766 0.93 15 26 9.5 1.5e+03 1.8 0.1 2 23 828 848 828 848 0.83 16 26 3.4e-05 0.0054 18.9 0.7 1 23 854 877 854 877 0.95 17 26 2.1e-06 0.00033 22.7 3.1 1 23 883 905 883 905 0.96 18 26 4.3e-05 0.0068 18.6 0.1 1 23 911 933 911 933 0.98 19 26 0.00024 0.037 16.3 0.7 1 23 938 960 938 960 0.97 20 26 0.002 0.31 13.3 4.4 5 23 969 987 966 987 0.96 21 26 0.018 2.8 10.3 1.0 2 23 1267 1289 1267 1289 0.96 22 26 3.1e-05 0.0048 19.0 2.4 1 23 1295 1317 1295 1317 0.97 23 26 0.00019 0.03 16.5 4.7 1 23 1323 1345 1323 1345 0.98 24 26 0.0081 1.3 11.4 2.3 2 23 1352 1373 1351 1373 0.97 25 26 0.00026 0.041 16.1 2.8 1 23 1379 1401 1379 1401 0.98 26 26 0.00017 0.027 16.7 1.6 1 23 1406 1429 1406 1429 0.97
Sequence Information
- Coding Sequence
- atgaaTAATGAAACCGAACATATATTCTTACTAAATCCTGCCCCGAGTGAGTCTTCGGCCCCTACACAGGAAATGGGCGCCCTGGAACCGCCACCGATCTCACAAGTTAACCTTGCTAATGTCAAAGACTTTTCACATGTATGTCGGACATGTGCCACAATCACAGAGTTTGTTATGCCCATATTTGCTGACGAGGGGCTGCAGAACAACTTGGCtgataaaatacataaacacTTACCAATAAAGGTATGCAAGGGTGATGAACTGCCACTGGTGGTGTGTTACCAGTGCGCTAGCACACTGCTGGCGTGGCATGAGCTGGTCCAGTGCTGCATGCAGGCCGATGCCGCCCTGCGCGCCAAGCTGCGCTCCAACCAACGGaaaACAAATCGTCCTAACATAAAACCAAGTACAAGTATAGAAGAGGAAACAGAAAGCAAGTTGTTTTACACGAGCGTCAGAAATGCTCTCGTTGACTTTCACATTGATCTGGACGAGGAAGATACGGACGTGGCGATTGTTTGCCAGAAGTGTGTGGAGATACCTGCACTGACTGGTGTACATAGCCTCGCTGACCATATCAGACATGACCACTTTCCTGAGATACTCGACAATTCTGTTAAAACATTCATCACTGATTACATAACGTTTGTACAAGCACTAGCTGAAGATTCAGACAGAGAAACTGTGTTAGATATTAAAGAGGCATCTCCGATAGTTCTGCCGGCCTTGCTCTGTCCGTTTTGTTCGAGTGTGTTCTCTTCAGCCACGCGGCTTGTGTACCATCTAAATAAGCACGTGGAAGTGAACCCGGCGAATGGCGTCATGTGCTGTGATCTCGTctatagcgacaagaaacactTCGTGCAACACTTGCAGGAAGAACACGTTGCCGGTAAAACCTATGAATCAGTGTGCGTTAACTGTGGCTTTACGACTGAGACAGCGGAAGAGCTAAAAGAACATTACAGAGACGCGCATAacgatgttaaaaataaacagagGAAAACAGAGAGTGCAAACAACCAGAAGTACATCCCAGCGGTGTGCCCCGAGTGCAACAAGACATTCTCCAACAAATATAACATGTTCGCGCACATgcgcacacacacgcacacCGCGGTCTACCCGTGCGACAAGTGCTCCAGGACATATCGCAACCAGGGGAACCTCACCCAACATAAGAAGATTGCGCACCAGGGCATTCTGAAGTTCATATGCGTCGAGTGCGGGGAAGCCTTCCCCCGTCGGTCAGAACGCGACATCCACGCGCGCATACACTCCGGAGAGACCCCCTACACGTGCCAGCACTGCGGCAAGTCGTTCCGCGCCAAGAACACGCTCACAAAGCACCTAGAGATACACGCAGACATACGCAAATACGAGAGCCCCTGCCACTTGCCCGAGGAGACCCGCACTACCTCCGACCTGTCCGAGCTGTCGGATGACGAACCGCTGGCCACGTTCGTCACAAGAAAACCTTCAAGCCTCTATACGAACTTCTATCGAGCACTCGTGAACTTCAGAGACCATTTTGTTAATGATCAACATCATGAGGATTATCCAGACCTCACAGACTCGAGCGAGTCTGAAACAGAGGAGAACAACGTGGACAGGTTCGACGACCTGACGCAGTGCAACATGCGGCGAGACCGGCTTGACGAGCAGACGCGCCTGGAGCTGAGGGAGGTGCAGAACAAGATCGATAACAAGACATACTACACGTGCAGGATCTGCAGCAAGAACCTGAGCTCGGCGCACACGTACCTGTTCCACAAGCGTATCCACACGGGTGAACGGCCGTGCGTGTGCCACGTATGCGGCAAGCAGTTCCGCGCGCCACACGGCCTGCAGCGCCACCTCACGGAGACGCACGAGCGTGTCAGGCGCTACAACTGCGACCTCTGCACCAAAAACTTCGCCAACTCTCAGAACCTCAAGCAGCACTTACGAATACACACCGGAGAGAAGCCTTTCGTGTGTTCTCATTGCGGGAAGAGGTTCACGCAGAGCGGTTCGTTACACGTGCATCTGAAGACTCACAGTGAACAGTTTCCTTACGAGTGCGCGGAGTGCGGGGCTAAGTTTAGACTGCGGTCGGGGCTGGTGCGGCACAGACTGAAGCACACGGGCGAGCGGCCGCACGTGTGCGCCACGTGCGGCAAGGGCTTCCGGCAGCGCCACGAGCTCAGCGCGCACAGTGCGGCGCACAGCGGCGCGGCGCCGCACGCGTGCGCGGCGTGCCCGCGCGCCTTCCGCCAGCGTCGCGCGCTGCGCCACCACGTGCGCCGCGTGCACGCCGCCGAgccgcccgccgccgccgcccgcctCTACAACCATTATCATTACACCGGTCCCATCCTTTCCCTTTCCAGGACGGTATTGCCTGAGGAAGAAAAGTCTCAAGAAGACGACAGAATCAAAATTGAGATCATCGAGAAACCGGAGTTTACGATAAGCGAGAATGGGAAGCGATACGCGAAGTGTGGCGTGTGTCAGAAGAGCGTGTCTGTGGGCGGGTGGGCGCGGCATGCGCGGGCGCACCGCGGGGAGCGGCGGCACAGCTGCCACACGTGCGGCCTGGCCTTCAACGACAGCGGGAACCTGGCGAGGCACGCCCGCGCTATACACTCCAAGCAGCGCCCACACGCTTGCCCGACCTGCCCGAAAACATTCTCACGGAAATCTCACTTAGAAGATCATGTCAAATCTCACTCTGAAAGCAGAACATTTGTTTGTGATATTTGTGGGAAGGGGTCCAAGTCTAGCGCGGCGCTACGCATGCACGCGCGCACGCACGACGCGTGCCGGTTCTCGTGCGTGCAGTGCGGCGCGCGGTTCAAGCGGCGCGGCGAGCTGTGCGCGCACGTGTCCGTGCACACCGGCGAGAAGGCGCACGCCTGCCACTGCGGGAAGACGTTCCGGTTGCGCAGCCAGCTGACCGCACACAAACGAGTGCATCAGAAGGCACAGGTGGGGGAAATGGAAGATCTAAACAATGATAGCAATGTACTAGAGTTATGCGACGAGGAGATTCAGCAGTCCGTGTGCGCGTACCGCTCGTGCGTGTACTGCGCCGCCCCGCAGCCCGCCGCCGCCTACCGGCAGCACCTGCTGCTGGTGCACGCCGACCTGCTGCTCCACTGCGAGCTGTGCGACCTGCTCGTGGAGCGCAAGGACTTCCTGCTGCACGTGTCCTACCACTCCGTACACTACGACACACACGACAGGaccaaaaaagttaaaaaagaacTTGTCAGCCAAAATCCCAGCCCAGTGCCTCCCACTCCAGCTACTGCTCCTCAGTCCACACAGAAAACAGAAACTAAACCACCAGATAAAACCGAACACAAAAAGCCTCCGGTGGTCGCTAGGGCCAGGACTAGTGTCCATGAAAACGAGTTCTCCGACCACAGCGACATGGACGACTTCGGTCCTCTGCCCGAGTCAGTGTTCGAAGCTATCGAAGACTCGCAAGACAGTCAGCAATTACAAGATAATTCCAATCAAACTCTAGAGAATGAGCGACTCGGTGACGAATCAAATAAATCTTCCCAACTAGAAGACAAAAATTCAAGTAATTCGGCACAGTGTTTggaaaataataactttacaaatatttgttcagttGTTGACGAACCTATCGATATAAATAGATGTGCCCAAAATATGAAAAAACTAATTAAGCAGAGTGATACAAGCAACAATATTGTTCTACCAGACAATAAAACGCAATCAAAAACTCCGGATCATCACCCGACTGCCGAAAAAGGGAAGAGGAACCAGAATAAGTTACGCAAGTGCCCCTTCTGTCCTAAAGAATACAAAGCGTCTTCCAGCTACTTCTACCACTTGAAGTACTTCCACAAAGGGAGCAAGGAGCACGAATGTGAGGTGTGCGGCAGAAAGTTCGGCACTCGGTCCTGTCTGACGCAACACATGGCCGTACACACCGCGCAGTACGAGTTCCAGTGTAAACAGTGTCACAAACAGTTCAAATCGAAGGCGAGCCTGTACATCCACGAGCAGACGCACAGCGGGAACAAGTCGTGGTCGTGCAGCCAGTGTCAGGCGGCGTTCAGGTGGAAGACGCATCTGCTGAGGCATATGAAGAGACACGCGGCGGAGAAGGGGCATGTCTGTGATACGTGCGGTCGAGGGTTTAGCGTCCGCTGCGATTTACTGCGGCACGAGCGCACGCACACCGCGGGGAACTTCTCCTGTGATAAATGTGGACAGAAGTTCGCTCAGCTGCGGTATTTGAAGGTGCACACTATGAAGCAGCACAAGACCAATATTAGGAAATCTAAGTAA
- Protein Sequence
- MNNETEHIFLLNPAPSESSAPTQEMGALEPPPISQVNLANVKDFSHVCRTCATITEFVMPIFADEGLQNNLADKIHKHLPIKVCKGDELPLVVCYQCASTLLAWHELVQCCMQADAALRAKLRSNQRKTNRPNIKPSTSIEEETESKLFYTSVRNALVDFHIDLDEEDTDVAIVCQKCVEIPALTGVHSLADHIRHDHFPEILDNSVKTFITDYITFVQALAEDSDRETVLDIKEASPIVLPALLCPFCSSVFSSATRLVYHLNKHVEVNPANGVMCCDLVYSDKKHFVQHLQEEHVAGKTYESVCVNCGFTTETAEELKEHYRDAHNDVKNKQRKTESANNQKYIPAVCPECNKTFSNKYNMFAHMRTHTHTAVYPCDKCSRTYRNQGNLTQHKKIAHQGILKFICVECGEAFPRRSERDIHARIHSGETPYTCQHCGKSFRAKNTLTKHLEIHADIRKYESPCHLPEETRTTSDLSELSDDEPLATFVTRKPSSLYTNFYRALVNFRDHFVNDQHHEDYPDLTDSSESETEENNVDRFDDLTQCNMRRDRLDEQTRLELREVQNKIDNKTYYTCRICSKNLSSAHTYLFHKRIHTGERPCVCHVCGKQFRAPHGLQRHLTETHERVRRYNCDLCTKNFANSQNLKQHLRIHTGEKPFVCSHCGKRFTQSGSLHVHLKTHSEQFPYECAECGAKFRLRSGLVRHRLKHTGERPHVCATCGKGFRQRHELSAHSAAHSGAAPHACAACPRAFRQRRALRHHVRRVHAAEPPAAAARLYNHYHYTGPILSLSRTVLPEEEKSQEDDRIKIEIIEKPEFTISENGKRYAKCGVCQKSVSVGGWARHARAHRGERRHSCHTCGLAFNDSGNLARHARAIHSKQRPHACPTCPKTFSRKSHLEDHVKSHSESRTFVCDICGKGSKSSAALRMHARTHDACRFSCVQCGARFKRRGELCAHVSVHTGEKAHACHCGKTFRLRSQLTAHKRVHQKAQVGEMEDLNNDSNVLELCDEEIQQSVCAYRSCVYCAAPQPAAAYRQHLLLVHADLLLHCELCDLLVERKDFLLHVSYHSVHYDTHDRTKKVKKELVSQNPSPVPPTPATAPQSTQKTETKPPDKTEHKKPPVVARARTSVHENEFSDHSDMDDFGPLPESVFEAIEDSQDSQQLQDNSNQTLENERLGDESNKSSQLEDKNSSNSAQCLENNNFTNICSVVDEPIDINRCAQNMKKLIKQSDTSNNIVLPDNKTQSKTPDHHPTAEKGKRNQNKLRKCPFCPKEYKASSSYFYHLKYFHKGSKEHECEVCGRKFGTRSCLTQHMAVHTAQYEFQCKQCHKQFKSKASLYIHEQTHSGNKSWSCSQCQAAFRWKTHLLRHMKRHAAEKGHVCDTCGRGFSVRCDLLRHERTHTAGNFSCDKCGQKFAQLRYLKVHTMKQHKTNIRKSK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01028526; iTF_01031320;
- 90% Identity
- iTF_01031320;
- 80% Identity
- -