Mlor025104.1
Basic Information
- Insect
- Mythimna loreyi
- Gene Symbol
- -
- Assembly
- GCA_029852875.1
- Location
- CM056805.1:4790002-4791864[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-12 2.4e-09 37.6 0.0 3 37 20 54 18 56 0.94
Sequence Information
- Coding Sequence
- ATGCCTCGAACTCAATTGTCACCAAAGCCGAAGTCGAGAAGAAAGAGTTGGACCAAGGCTAACATGATTGAAGCTGTAAAAGCAGTGAGAGAAAAGAAAATGGGTTTGAAAAAAGCAGTTAAACTGTATAGCGTTCCAAAAACTACTTTGCAAAGATTTGTGCACAGTGACCAGCCTCCCGATGAGGTTGTAAATACTACTATAGGAAGAAGACCTGTCCTGCCAACTCATCTTGAAGAAAGCCTTGTATCATACCTTCTCCTTATGGAAAGTAAATTTTATGGCTTGACCCGTCAGGATGTTCGTAAAATGGCCTATCAGTTGGCtgtgaaaaataatattgaacatCCGTTTCGAAATAACATAGCCGGGCGAGCTTGGCTTGATCATTTCTTATTACGGCACAAAGATAAACTGTCCATTCGATCACCAACAGGAACTTCCAATGCTCGAGCTCAAGGTTTCAATAAAGAAGCAGTGGATAAGTTCTTTGACCTTCTTGAAGAAGAATtcgaaaaacataattatcctCCCGAGAGAATTTTTAATGTCGACGAAACAGGGCTTTCTATCGTACAAAGTAAAATAGTTAAAGTAATTGGTCTGCGAGGGAAAAGGCAAGTAGGTACCATAACTGCGGCTGAGCGTGGATCATTGGTGACAGTTGTATCAGCGATGAGCGCAAGTGGCATATTTATTCCACCGTTGTTAATATTTCCACGCAAAAACATGACGCAAACGTTGATGAAAGGAGCTCCGCCAGGTTCTATAGGAAGATGTCACCCATCAGGATGGATTCAGGCAAATCTATTTACTGACTGGTTTCatcatttcattgaaaagacCCACCCGACTGAAGCCTCGCCTGTTTTATTAATTCTTGATGGTCATTATTCACATACACGCAATTTAGATATTTTGATGGCAGCTAGAGCTAACAACGTCACAATTATTAGTTTACCTCCACATTCAACACACAAGATGCAACCTCTTGACAGGTCTTTTATGGGTCCTTTGAAAACGTACTACAGTGAAGAAATTAGACAGTGGTTACTCAATTCCAACAAGACATTGACTCCATACGAAATATCTGAATTGCTGGGACGTGCTTATCTCAGGTGCCAAACAGGAGCTATTGCTGTAAATGGGTTCAGGGTAACTGGTATTTACCCGATTAACAGAAACGTTTTTACTGAAGTCGACTACCTAGCAAGCACAGGTGAGACCACTCTTCAAGCTACTGATGATGACCCTCATCTACCGTCTACTAGTACGCATATTGCTGTTCAAATGCCACAGCCAGAACCTCAACCAGGCCCTAGTGGACAAGCAAATCAGTCATCCCCGCAAGTGATTGATAGCAATCCTGTTGTTCTTCCTGAACACATCTTATCGGTGCCGACACCCAAGAATAAAAGATCTAACAGAGGCCGTAAGTCATCTGCTGCTACTTTATTGACTGGGTCTCCTTACAAACAGCAACTTGAGGAGTCAATCAAGTCTATAGCGCAGAGAGGAAGAGGTCAAGGAAGAGGTCGGGGAAGAGGTCGGGGAAGAGCTCGTGGGCGTAGTGGTGGGCAGACTATTTCAAAGTCTTCAAGAGCTCCTCTAAACAGCCAGGATTTTACCTCATCGGATTCTGAATCTTCTGTTTCTTCAGGAGACACTGTTATGTCAGAAAATTATACCGCGTATGCCCAGCCCACAAACCAAGATGACGCTTGTTGCATTTTTTGTTCTGAAAATTACTCCAACGATCAACAGGGTGAAACTTGGATTCAGTGCCAATCATGTAGGTTGTGGGCGCATATTGAATGCTCAGGATGCGACGCGGAGTATTATATATGTGATTTTTGCAAGTAA
- Protein Sequence
- MPRTQLSPKPKSRRKSWTKANMIEAVKAVREKKMGLKKAVKLYSVPKTTLQRFVHSDQPPDEVVNTTIGRRPVLPTHLEESLVSYLLLMESKFYGLTRQDVRKMAYQLAVKNNIEHPFRNNIAGRAWLDHFLLRHKDKLSIRSPTGTSNARAQGFNKEAVDKFFDLLEEEFEKHNYPPERIFNVDETGLSIVQSKIVKVIGLRGKRQVGTITAAERGSLVTVVSAMSASGIFIPPLLIFPRKNMTQTLMKGAPPGSIGRCHPSGWIQANLFTDWFHHFIEKTHPTEASPVLLILDGHYSHTRNLDILMAARANNVTIISLPPHSTHKMQPLDRSFMGPLKTYYSEEIRQWLLNSNKTLTPYEISELLGRAYLRCQTGAIAVNGFRVTGIYPINRNVFTEVDYLASTGETTLQATDDDPHLPSTSTHIAVQMPQPEPQPGPSGQANQSSPQVIDSNPVVLPEHILSVPTPKNKRSNRGRKSSAATLLTGSPYKQQLEESIKSIAQRGRGQGRGRGRGRGRARGRSGGQTISKSSRAPLNSQDFTSSDSESSVSSGDTVMSENYTAYAQPTNQDDACCIFCSENYSNDQQGETWIQCQSCRLWAHIECSGCDAEYYICDFCK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00327012;
- 90% Identity
- iTF_01443757; iTF_01443758; iTF_01443759; iTF_00637451; iTF_00637452; iTF_00637453; iTF_00637454; iTF_00357362; iTF_01075357; iTF_01312160; iTF_01312159;
- 80% Identity
- -