Basic Information

Insect: Chrysodeixis includens
Gene Symbol: -
Assembly: GCA_941860345.1
Location: OW796119.1:2780781-2782628[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.8e-13 1.5e-10 40.9 0.0 1 38 18 55 18 60 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.8e-13	1.5e-10	40.9	0.0	1	38	18	55	18	60	0.94

Sequence Information

Coding Sequence: ATGCCCAGAACTCAATTATCATCTAAGCCAAAGTCAAAAAGAAAACAATGGACGAAGGATAATATGATTGAAGCTGTAAAAGCAGTAAGAGAAAAGAAAATGGGTTTGAAAAAAGCAGTTAAACTTTATAGTGTTCCTAAAACTACTCTGCAAAGGTTTGTTAATTGCAATCAACCTGCCAATGAGGTTGTAAATACTACTATAGGAAGAAGACCAGTGTTGCCATTGCATCTTGAAGAAAGCCTTGTTTCTTACCTTCTAGTCATGGAAAGTAAGTTCTATGGCTTGACCCGTCAggatgttcgcaaaatggcctatcagctagctgtgagaaataatatcgaacatccttttaaaaataacacagcaggtcgagcttggcttgatcatttcttatcacgccacaaagatagactttctatacgctctcctacaggaacatccaatgctcgggctctaggtttcaataaagaagcagtagataagttctttgatattctagaagaggaattccaaaggcataattaccccccagagagaatttttaatgtcgacgaaaccggattatctatcgtacagagtaaaatggtaaaagtagttggtcttcgaggaaaacgacaagtaggtagtataactgcggctgaacgtggatcattggtcactgtggtatcagctatgagtgcgagtgggatatttataccaccattgctgatatttccacgcaaaaacatgacgcaaacattgatgaaaggagctccaccaggctctataggaaggtgccacccatcaggatggattcagaccaatctgtttacagactggttccatcacttcattgaaaagacccacccaactgaagactcacctgttttattaattcttgatggccattattcacacacacgcaacctagaagttctaatggcagctagagctaatcatgtcacaatgattagtttacctccacattcgacgcataaaatgcagccattggacaggtcttttatgggtcccttgaaaagctactacagcgaagaaattagacagtggttgcttaattccaaccgaattttgactccatatgaaatagctgaattgcttggacgtgcttatctcaggtgccaaactggagctattgctgtaaatggattcagagtaactggtatatatccattaaatagaaatgtattttctgaagctgacttCATAGCAAGCTCTGGTGAGACCTCTCTTCAACCTCAAGCTACTAAAAATGAGCCTCATCAACCGTCTACAAGTACTGGTGTTGCTGAGCAAATGCCACAGTCACCAGAACCTCAACCAGGCCCGAGTGGACTGGCGAATAGATCAACCCCGCAAGTTATTGATAGCAATCCTGTTGTACTTCCTGAAGATATCTTACCTGTACCGACACCAAAAAATAAAAAATCTAACAGAGGCCGCAAGTCGTCTACCGCCACTATACTGACCGGATCTCCTTACAAAAAGCAACTTGAAGAGTCAATCAAGGCTATAACACAGAGAGGAAGAGGCCGAGGAAGAGCTCGTGGATGTAGTCGTAGGAAGGCAACAGAAAACTCTTCTAGAAATCCTCAGAACCGCCAGGAATCCAGTTCTTTGGATTCAGAATTATCCGTATCTTCAGGAGACACTGCTATGTCTGGAAATGCTACCGCGTATAATCAGCCCACTGACCTAGATGATGCTTGGTGCATTTTTTGCTCTGAAAGTTATTCTAATGATCAGCggggtggaacttggattcagtgtcaatcgtgtgatttgtgggctcatctagaatgctcagggtgtgaaacagaatattatatttgtgatttttgtaaataa
Protein Sequence: MPRTQLSSKPKSKRKQWTKDNMIEAVKAVREKKMGLKKAVKLYSVPKTTLQRFVNCNQPANEVVNTTIGRRPVLPLHLEESLVSYLLVMESKFYGLTRQDVRKMAYQLAVRNNIEHPFKNNTAGRAWLDHFLSRHKDRLSIRSPTGTSNARALGFNKEAVDKFFDILEEEFQRHNYPPERIFNVDETGLSIVQSKMVKVVGLRGKRQVGSITAAERGSLVTVVSAMSASGIFIPPLLIFPRKNMTQTLMKGAPPGSIGRCHPSGWIQTNLFTDWFHHFIEKTHPTEDSPVLLILDGHYSHTRNLEVLMAARANHVTMISLPPHSTHKMQPLDRSFMGPLKSYYSEEIRQWLLNSNRILTPYEIAELLGRAYLRCQTGAIAVNGFRVTGIYPLNRNVFSEADFIASSGETSLQPQATKNEPHQPSTSTGVAEQMPQSPEPQPGPSGLANRSTPQVIDSNPVVLPEDILPVPTPKNKKSNRGRKSSTATILTGSPYKKQLEESIKAITQRGRGRGRARGCSRRKATENSSRNPQNRQESSSLDSELSVSSGDTAMSGNATAYNQPTDLDDAWCIFCSESYSNDQRGGTWIQCQSCDLWAHLECSGCETEYYICDFCK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00959343; iTF_00959344; iTF_00461503; iTF_00461494; iTF_00273537; iTF_00726223; iTF_00851700; iTF_00937204; iTF_00851701; iTF_00937205; iTF_01192565; iTF_00726232; iTF_00120413; iTF_00120414; iTF_01431772; iTF_00771806; iTF_00960099; iTF_01028198; iTF_01443757; iTF_01443758; iTF_01443759; iTF_00357362; iTF_00408323; iTF_01020165; iTF_00809035; iTF_00637451; iTF_00637452; iTF_00637453; iTF_00637454; iTF_00637440; iTF_01075357; iTF_01349557; iTF_01349558; iTF_01349559; iTF_01349560; iTF_00801726; iTF_00801725; iTF_00408324; iTF_01312160; iTF_01312159;
90% Identity: iTF_00461503;
80% Identity: -