Mlal022412.1
Basic Information
- Insect
- Mythimna lalbum
- Gene Symbol
- pol_1
- Assembly
- GCA_949319445.1
- Location
- OX439364.1:5182571-5211314[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 7.7 3.6e+03 -0.9 0.0 47 76 309 340 297 353 0.69 2 5 7.3e-15 3.4e-12 47.5 0.0 4 109 1004 1140 1001 1141 0.86 3 5 2e-08 9.4e-06 26.8 0.0 9 44 1237 1271 1232 1280 0.87 4 5 5.4e-14 2.5e-11 44.7 0.0 13 96 1282 1365 1274 1381 0.82 5 5 2.9 1.4e+03 0.5 0.0 77 106 1380 1409 1372 1412 0.80
Sequence Information
- Coding Sequence
- ATGCAGCAGGGTAACCAGCCCCGAACCGAAGGTCGGTCATTACAAAATCGTGTTGCCATGCAGCAGGGTAACCAGCCCCAAAACGAAGGCCGACACAAACTAGATTCATCTCAACACATATCGTCAGGAATCTCTGTTTCGTTGAGTGCTAATGTCCCACAAAATCAGGAGGCCGTCACCCCGATCCATGAAATTAAATTCCGCAAAGTCTGTCTACCCCACGTATTTCTCAATACTGTTTATTCAGATAAACCTCTATGCTTCCTTATTGACACGGGAGCTAGTGTTAGTATTGTCAAACTTAAAAACTTTAGTTCTACACCATCCTTATCTAACGATAAAATCAAACTCAAGGGTTTGAGTGAAGACGACTCCTGTTACGAAACTTTAGGGTCATTCACCATAGACTTCAAATATACTTGCCCTCCAAATCCTAATCTCTGTTTTAGTCACACTTTCCACGCCGTCAGTAATAAAGTACGGCTTGATTATGATGGTATCTTAGGTAATGATTTCCTACAAAAACTCGAGTGTGATGTTAAATATTCTCAGAACGCGCTGTTCATTAGAGGTCATCTTATACCGCTAAATTTTAGGCGAATTGTCTACACCATTCCGCCTCGCTCTGAGGCAATCGTCGAATGTCCTATTTCAAATTCCTTAAAGGAGTTAAAGCACATGAAAGATGCTCTAGTCCTTGATCATATATACTCAGAAGGAGTCTACTTAGCAAACTGTATTGTCACAATTAAACCTAACCACTGTGTCAATATTTCGGTGCTCAATACTACCGAGTCGGAAATCGTATTTAAAGATTACTACGTTCATTTACTTCCATATGAGCCCGAAATTGTTTCAACCGCGTCTCTTAATAACGACAATTACCAAAACATAAATAATCTTTTCAATATCTCAAACGATAGATCACAACAAGTCCTAGACCTCATTCGTACTGAACACCTCAACCCTGAAGAGACAAAAATACTCTTAGAGTGTTGTTCAGATTACACCGATATTTTCCACCTCGAGGGCGAGCCTCTGACACATACCAATGCTATTGACCATTCGATAAACACCGGTAACGCTGCTCCGATACATGTAAAATCTTATCGTTTTCCCGAATGCCACAAAGGTGAAGTCGAATCTCAAATCAAAAGTATGCTAGACCAAAATATCATCCGTCCTTCCAAGTCACCTTGGAGCGCCCCAATTTGGGTAGTGCCCAAAAAGGTAGACTCAACGGGCAAACAAAAATGGAGGTTAGTCATTGACTATAGAAAATTAAATGACGTGACAGTCACCGAAGTTTATCCCATACCCTTGATCACAGATATCCTAGACCAACTGGGCCACTCAAAATATTTTAGCACTTTAGACCTCGTAAGTGGCTtccatcaaataaaattaaatcccaAGGATGCGTCCAAAACCGGCTTCACCGTGGTAGGTAACGAGATATCCGGGCATTATGAATTCACAAGAATGCCCTTCGGATTAAAAAATGGTCCAGCTACGTTCCAAAAACTTATGAATGCTGTACTCTCTGGCCTTCAAGGCCTTCACTGTTATATCTATTTAGATGACTGCATTATCTATAGCCAGAATCTCCAATCTCATATCGACAAACTCAAACTAATCTTCGATAGATTTCGTGAATACAATCTCAAATTACAGCCCGCAAAGTGCGAATTCTTACGACGCGAAGTAGCCTATTTAGGTCATATAATTACTGATAAAGGTTTTTGTCCCAATCCAGATAAAATCAAGGCCGTCACTCAATTTCCAAACCCCAGAAATCCGAAAGATATAAAATCTTTCCTAGGCCTGGTCGGATACTATAGGCGATTTATTGAAAACTTTTCCAAGATTACAAAACCCCTAACTTCTCTTCTAAAAAAAGACGTTTCTTTTATTTGGTCAGCAGAGCAAGAAAATGCTTTTAACATACTGaaacataaattaacaacgGCGCCCCTATTACAATATCCAGATTTTTCTCAGCCGTTTCTACTGACTACCGATGCTTCTAACTACGCCATAGGCGCTATACTATCTCAAGGCGAAATAGGCAAGGATAAGCCTATCGCATACGCATCGCGAACACTAAACAAAGCCGAGGGCAACTACTCAACAACCGAGAAAGAGCTCTTAGCCATCCTTTTCGGTGTCAAAACGTTTCGTCCCTATCTGTTCGGCTATAGGTTCAAAATCGTCACTGATCACAAGCCCTTAGTTTGGCTATTCAACGTCAAAGATCCTGGCTCTAGACTAATACGTTGGCGCCTAAAATTAGAAGAGTATAACTATGAAATAGTCCACAAACAAGGCAAACTAAATTGTAACGCAGACGCTCTGTCGCGTTTCCCATTACAAGATcctgataataatttaaatcgcCCGGTATGCGCTATCGAGGATGAGTCATCGAACTCAAATATTCCGAATCCTCCGGACTCTCATCCTCCAAGCTCACCCTCCGATAATCCTTCGCCATGCTCGTCAGAtacttatgaaaaatatttaaaacaatctaAACAGCCTAACTTTTGTTTCGATACCACCATCCAAGAATACAACGAATCATTATTAAAGGCCAAGTGCAAGTTAATTGCATATCCTACTTCAATTGATCTGGACGACTCTGTTCCTTATTGCAAAGACATTATAGACTTATCTACAAGTCAACCTAGCGTTCGTGACATTGAACGTGAACTTTATACCTTATACAGCACTTCTAATGATAAACACTTGTTCACCCATTTATTCTTGCGCGTGCATCACTACGATGAAATGTCATATAAGGATATTTTTAGACTATTAGTCGAATATAGGGATATGGTTAAATATTGGTATTTAGAGGAGAAGGAAGTGGCGATTTCAGACTTCTCCGATCCATTCACTAAACTttcttatacaaaaatatacaatattataggCTACGTGTTCCATGATACTGgcattaaatTATCAAACTACCCTCGCTGCACGCTACACGATGACTTCGGGCGCATCCTGAAGTCTCATCAGTTCTGCGACGTGCAAATCTTAGTGGGGCCTGAGAAGACGTCTATATTGGCACACCAGGCCATATTAGCCGCCCGGTCGCAGTTCCTACGAGCTAAGATCAAGGAAGCTCGAGATGAACTAACAAAGCGCATCGCCGCCGGCGAGGAGGAAGCATCAGAAGTGTGCTCGTACAAGACGCCGCCCCAGCTGTGCGTGTTGCTGCCCGAGGCCACGCCCGAGTCTTTCAACATGGTGCTCAACTACATATACACCGACAGGATAGACCCCACTGAGAAAGACGAAGACCCGGCGTCCCCGGCCACCGTGCTGCTGGTGATGGCGGTGCTGCGCCTGGCGCTGCGCCTCAACATCCCTCGCCTGCGCGGCCTGTGCGCGCGCTTCCTGCGAGCCAACCTCTGCTACGGCAACGTGCTGCAAGCGCTACACGCCGCGCACCACGCCAACCTCACGTGCATCAAAGAGTACTGCTTGAGATTCGTAGTGAAAGACTATAACTTCACTCCAATAGTGATGTCGAAAGAGTTCGAGGAGATGGAACAGAGCTTGATGGTGGAAGTGATTCGTCGACGGCAGCAGCCACCGCACAAGCAGACCAACGCGGTCGTACAGCAGGAGTACGATGAAGAGATTATCGGAACAACTCTGGAGCAGGACATGTGCGTGTTGCTGGGCGGCGGCGCCGAGCTGTCCGACGTGCGCCTGCGGGTGGGCGCGGCGTCGCGGCCCGCGCACCGCTCCgtgctggcggcgcgcgcggcctaCTTCGAGGCCATGTTCCGCTCCTTCTCGCCGCACGACAACATCGTCAATTGTTGTACTACTGTACTACTGGGCGCGGCGTCGCGGCCCGCGCACCGCTCCgtgctggcggcgcgcgcggcctaCTTCGAGGCCATGTTCCGCTCCTTCTCGCCGCACGACAACATCGTCAATATACAAATCTGCGACACGGTGCCGTCGGAGGAGGCGTTCGACTCCCTGCTGCGATACATCTACTACGGTGACACCAACATGCCCACAGAAGACTCGCTGTACCTGTTCCAAGCGCCGATATACTATGgttttacaaataaccggcTGCAAGTATTCTGCAAGCACAACTTGCAGAGCAACGTGTCGCCGGAGAACGTGCTCGCGATCCTGCAAGCTGCCGACCGGATGCGCGCCACCGACATCAAGGAGTACGCGCTCAAAATGATCGTGCATCACTTCGGACTTGTGGCGAGGCAAGACGCCATCAAGAACTTGGCGCAACCGCTCCTGGTGGACATCATCTGGGCGCTGGCCGAGGAGCCGCACTTCGACTCGCCGCTCCCGGTGCAGCCCAGGTCCCTGCCCTCGTCGTCATCAGCCGACACGCTCACTGACGACCCCGACTACTCCAGACATAAATGCGGGAAATCATAG
- Protein Sequence
- MQQGNQPRTEGRSLQNRVAMQQGNQPQNEGRHKLDSSQHISSGISVSLSANVPQNQEAVTPIHEIKFRKVCLPHVFLNTVYSDKPLCFLIDTGASVSIVKLKNFSSTPSLSNDKIKLKGLSEDDSCYETLGSFTIDFKYTCPPNPNLCFSHTFHAVSNKVRLDYDGILGNDFLQKLECDVKYSQNALFIRGHLIPLNFRRIVYTIPPRSEAIVECPISNSLKELKHMKDALVLDHIYSEGVYLANCIVTIKPNHCVNISVLNTTESEIVFKDYYVHLLPYEPEIVSTASLNNDNYQNINNLFNISNDRSQQVLDLIRTEHLNPEETKILLECCSDYTDIFHLEGEPLTHTNAIDHSINTGNAAPIHVKSYRFPECHKGEVESQIKSMLDQNIIRPSKSPWSAPIWVVPKKVDSTGKQKWRLVIDYRKLNDVTVTEVYPIPLITDILDQLGHSKYFSTLDLVSGFHQIKLNPKDASKTGFTVVGNEISGHYEFTRMPFGLKNGPATFQKLMNAVLSGLQGLHCYIYLDDCIIYSQNLQSHIDKLKLIFDRFREYNLKLQPAKCEFLRREVAYLGHIITDKGFCPNPDKIKAVTQFPNPRNPKDIKSFLGLVGYYRRFIENFSKITKPLTSLLKKDVSFIWSAEQENAFNILKHKLTTAPLLQYPDFSQPFLLTTDASNYAIGAILSQGEIGKDKPIAYASRTLNKAEGNYSTTEKELLAILFGVKTFRPYLFGYRFKIVTDHKPLVWLFNVKDPGSRLIRWRLKLEEYNYEIVHKQGKLNCNADALSRFPLQDPDNNLNRPVCAIEDESSNSNIPNPPDSHPPSSPSDNPSPCSSDTYEKYLKQSKQPNFCFDTTIQEYNESLLKAKCKLIAYPTSIDLDDSVPYCKDIIDLSTSQPSVRDIERELYTLYSTSNDKHLFTHLFLRVHHYDEMSYKDIFRLLVEYRDMVKYWYLEEKEVAISDFSDPFTKLSYTKIYNIIGYVFHDTGIKLSNYPRCTLHDDFGRILKSHQFCDVQILVGPEKTSILAHQAILAARSQFLRAKIKEARDELTKRIAAGEEEASEVCSYKTPPQLCVLLPEATPESFNMVLNYIYTDRIDPTEKDEDPASPATVLLVMAVLRLALRLNIPRLRGLCARFLRANLCYGNVLQALHAAHHANLTCIKEYCLRFVVKDYNFTPIVMSKEFEEMEQSLMVEVIRRRQQPPHKQTNAVVQQEYDEEIIGTTLEQDMCVLLGGGAELSDVRLRVGAASRPAHRSVLAARAAYFEAMFRSFSPHDNIVNCCTTVLLGAASRPAHRSVLAARAAYFEAMFRSFSPHDNIVNIQICDTVPSEEAFDSLLRYIYYGDTNMPTEDSLYLFQAPIYYGFTNNRLQVFCKHNLQSNVSPENVLAILQAADRMRATDIKEYALKMIVHHFGLVARQDAIKNLAQPLLVDIIWALAEEPHFDSPLPVQPRSLPSSSSADTLTDDPDYSRHKCGKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -