Mimp046349.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Mythimna impura
Gene Symbol
NOX5
Assembly
GCA_905147345.1
Location
LR990363.1:976012-985930[+]

Transcription Factor Domain

TF Family
zf-LITAF-like
Domain
zf-LITAF-like domain
PFAM
PF10601
TF Group
Zinc-Coordinating Group
Description
Members of this family display a conserved zinc ribbon structure [3] with the motif C-XX-C- separated from the more C-terminal HX-C(P)X-C-X4-G-R motif by a variable region of usually 25-30 (hydrophobic) residues. Although it belongs to one of the zinc finger's fold groups (zinc ribbon), this particular domain was first identified in LPS-induced tumour necrosis alpha factor (LITAF) which is produced in mammalian cells after being challenged with lipopolysaccharide (LPS)[2]. The hydrophobic region probably inserts into the membrane rather than traversing it. Such an insertion brings together the N- and C-terminal C-XX-C motifs to form a compact Zn2+-binding structure [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.0067 27 6.8 0.1 35 65 139 170 125 175 0.71
2 19 0.00036 1.5 10.9 1.3 4 65 160 225 158 230 0.77
3 19 0.00029 1.2 11.2 1.2 4 65 215 280 212 285 0.77
4 19 0.00039 1.6 10.7 3.0 4 65 270 335 267 340 0.77
5 19 0.00031 1.3 11.0 1.3 4 65 325 390 322 395 0.77
6 19 0.00027 1.1 11.2 1.1 4 65 380 445 377 450 0.77
7 19 0.00032 1.3 11.0 1.3 4 65 435 500 432 505 0.77
8 19 0.00032 1.3 11.0 1.3 4 65 490 555 487 560 0.77
9 19 0.00029 1.2 11.1 1.2 4 65 545 610 542 615 0.77
10 19 0.00027 1.1 11.2 1.0 4 65 600 665 598 670 0.77
11 19 0.00026 1.1 11.3 1.1 4 65 655 720 652 725 0.77
12 19 0.00029 1.2 11.1 1.2 4 65 710 775 707 780 0.77
13 19 0.00029 1.2 11.2 1.2 4 65 765 830 762 835 0.77
14 19 0.00026 1 11.3 1.0 4 65 820 885 817 890 0.77
15 19 0.00027 1.1 11.3 1.1 4 65 875 940 872 945 0.77
16 19 0.00027 1.1 11.2 1.1 4 65 930 995 927 1000 0.77
17 19 0.00025 1 11.3 1.0 4 65 985 1050 982 1055 0.77
18 19 0.00025 1 11.4 1.0 4 65 1040 1105 1037 1110 0.77
19 19 0.00022 0.91 11.5 0.8 4 65 1095 1160 1092 1165 0.77

Sequence Information

Coding Sequence
ATGCGCTCCGAATCAGAGAGTAAACTCGACGAGAGTTCGATGCTCAGCGCTCGCAAGACCTTCGGCCTCGCGTGCAAGATCCCGCAGAACAAGTCTCTGGTGCACAGCTTCCGGTACATGAGGACCAAGCCGACGATCATAGCCTTCAAGACGCCCAGCTTCGATGAGAGGAGACGAAGTAATGATAGTATACTGACTATTGCACGACGTCGCCTATCAAAGAGTTTATCTCCAGACAGAGATGTGGAGTCTCAGCCGGACAAGATAGTGGAAGTTGATAACGATGGCTCCGAGGTCACTGACGACTTTGAGAGTAACTATCCTATTGGCAAGCCTTTGGAGATCTATCTGGACGGTCCATACGGTGCGGCGTCGTCGCACATCTTCCTGGCGCAGCACGCGGCGCTGGTGGCGGCCGGCATCGGCGTCACGCCCTTCGCGTCCATCCTGCAGGCCGTCATGTACCGCTACTGGAGCGCGCGCCACGCCTGCCCCAAGTGCGGACACGCCTGGGCCACCGACATGCCCAGGCATAACATGAATCTCAAGAAGGTTGGTCTAGTGCTTGCTAGCTATACTGTACGGCGCGGCGTCACGCCCTTCGCGTCCATCCTGCAGGCCGTCATGTACCGCTACTGGAGCGCGCGCCACGCCTGCCCCAAGTGCGGACACGCCTGGGCCACCGACATGCCCAGGCATAACATGAATCTCAAGAAGGTTGGTCTAGTGCTTGCTAGCTATACTGTACGGCGCGGCGTCACGCCCTTCGCGTCCATCCTGCAGGCCGTCATGTACCGCTACTGGAGCGCGCGCCACGCCTGCCCCAAGTGCGGACACGCCTGGGCCACCGACATGCCCAGGCATAACATGAATCTCAAGAAGGTTGGTCTAGTGCTTGCTAGCTATACTGTACGGCGCGGCGTCACGCCCTTCGCGTCCATCCTGCAGGCCGTCATGTACTGCTACTGGAGCGCGCGCCACGCCTGCCCCAAGTGCGGACACGCCTGGGCCACCGACATGCCCAGGCATAACATGAATCTCAAGAAGGTTGGTCTAGTGCTTGCTAGCTATACTGTACGGCGCGGCGTCACGCCCTTCGCGTCCATCCTGCAGGCCGTCATGTACCGCTACTGGAGCGCGCGCCACGCCTGCCCCAAGTGCGGACACGCCTGGGCCACCGACATGCCCAGGCATAACATGAATCTCAAGAAGGTTGGTCTAGTGCTTGCTAGCTATACTGTACGGCGCGGCGTCACGCCCTTCGCGTCCATCCTGCAGGCCGTCATGTACCGCTACTGGAGCGCGCGCCACGCCTGCCCCAAGTGCGGACACGCCTGGGCCACCGACATGCCCAGGCATAACATGAATCTCAAGAAGGTTGGTCTAGTGCTTGCTAGCTATACTGTACGGCGCGGCGTCACGCCCTTCGCGTCCATCCTGCAGGCCGTCATGTACCGCTACTGGAGCGCGCGCCACGCCTGCCCCAAGTGCGGACACGCCTGGGCCACCGACATGCCCAGGCATAACATGAATCTCAAGAAGGTTGGTCTAGTGCTTGCTAGCTATACTGTACGGCGCGGCGTCACGCCCTTCGCGTCCATCCTGCAGGCCGTCATGTACCGCTACTGGAGCGCGCGCCACGCCTGCCCCAAGTGCGGACACGCCTGGGCCACCGACATGCCCAGGCATAACATGAATCTCAAGAAGGTTGGTCTAGTGCTTGCTAGCTATACTGTACGGCGCGGCGTCACGCCCTTCGCGTCCATCCTGCAGGCCGTCATGTACCGCTACTGGAGCGCGCGCCACGCCTGCCCCAAGTGCGGACACGCCTGGGCCACCGACATGCCCAGGCATAACATGAATCTCAAGAAGGTTGGTCTAGTGCTTGCTAGCTATACTGTACGGCGCGGCGTCACGCCCTTCGCGTCCATCCTGCAGGCCGTCATGTACCGCTACTGGAGCGCGCGCCACGCCTGCCCCAAGTGCGGACACGCCTGGGCCACCGACATGCCCAGGCATAACATGAATCTCAAGAAGGTTGGTCTAGTGCTTGCTAGCTATACTGTACGGCGCGGCGTCACGCCCTTCGCGTCCATCCTGCAGGCCGTCATGTACCGCTACTGGAGCGCGCGCCACGCCTGCCCCAAGTGCGGACACGCCTGGGCCACCGACATGCCCAGGCATAACATGAATCTCAAGAAGGTTGGTCTAGTGCTTGCTAGCTATACTGTACGGCGCGGCGTCACGCCCTTCGCGTCCATCCTGCAGGCCGTCATGTACCGCTACTGGAGCGCGCGCCACGCCTGCCCCAAGTGCGGACACGCCTGGGCCACCGACATGCCCAGGCATAACATGAATCTCAAGAAGGTTGGTCTAGTGCTTGCTAGCTATACTGTACGGCGCGGCGTCACGCCCTTCGCGTCCATCCTGCAGGCCGTCATGTACCGCTACTGGAGCGCGCGCCACGCCTGCCCCAAGTGCGGACACGCCTGGGCCACCGACATGCCCAGGCATAACATGAATCTCAAGAAGGTTGGTCTAGTGCTTGCTAGCTATACTGTACGGCGCGGCGTCACGCCCTTCGCGTCCATCCTGCAGGCCGTCATGTACCGCTACTGGAGCGCGCGCCACGCCTGCCCCAAGTGCGGACACGCCTGGGCCACCGACATGCCCAGGCATAACATGAATCTCAAGAAGGTTGGTCTAGTGCTTGCTAGCTATACTGTACGGCGCGGCGTCACGCCCTTCGCGTCCATCCTGCAGGCCGTCATGTACCGCTACTGGAGCGCGCGCCACGCCTGCCCCAAGTGCGGACACGCCTGGGCCACCGACATGCCCAGGCATAACATGAATCTCAAGAAGGTTGGTCTAGTGCTTGCTAGCTATACTGTACGGCGCGGCGTCACGCCCTTCGCGTCCATCCTGCAGGCCGTCATGTACCGCTACTGGAGCGCGCGCCACGCCTGCCCCAAGTGCGGACACGCCTGGGCCACCGACATGCCCAGGCATAACATGAATCTCAAGAAGGTTGGTCTAGTGCTTGCTAGCTATACTGTACGGCGCGGCGTCACGCCCTTCGCGTCCATCCTGCAGGCCGTCATGTACCGCTACTGGAGCGCGCGCCACGCCTGCCCCAAGTGCGGACACGCCTGGGCCACCGACATGCCCAGGCATAACATGAATCTCAAGAAGGTTGGTCTAGTGCTTGCTAGCTATACTGTACGGCGCGGCGTCACGCCCTTCGCGTCCATCCTGCAGGCCGTCATGTACCGCTACTGGAGCGCGCGCCACGCCTGCCCCAAGTGCGGACACGCCTGGGCCACCGACATGCCCAGGCATAACATGAATCTCAAGAAGGTTGGTCTAGTGCTTGCTAGCTATACTGTACGGCGCGGCGTCACGCCCTTCGCGTCCATCCTGCAGGCCGTCATGTACCGCTACTGGAGCGCGCGCCACGCCTGCCCCAAGTGCGGACACGCCTGGGCCACCGACATGCCCAGGCATAAtgtagggtgcaatcctaacataaatatgatgtcaatgcaatgcaaatgcaagtgtaataaatgcagaaatgtcactgagtgcctaacgggaagagtctaa
Protein Sequence
MRSESESKLDESSMLSARKTFGLACKIPQNKSLVHSFRYMRTKPTIIAFKTPSFDERRRSNDSILTIARRRLSKSLSPDRDVESQPDKIVEVDNDGSEVTDDFESNYPIGKPLEIYLDGPYGAASSHIFLAQHAALVAAGIGVTPFASILQAVMYRYWSARHACPKCGHAWATDMPRHNMNLKKVGLVLASYTVRRGVTPFASILQAVMYRYWSARHACPKCGHAWATDMPRHNMNLKKVGLVLASYTVRRGVTPFASILQAVMYRYWSARHACPKCGHAWATDMPRHNMNLKKVGLVLASYTVRRGVTPFASILQAVMYCYWSARHACPKCGHAWATDMPRHNMNLKKVGLVLASYTVRRGVTPFASILQAVMYRYWSARHACPKCGHAWATDMPRHNMNLKKVGLVLASYTVRRGVTPFASILQAVMYRYWSARHACPKCGHAWATDMPRHNMNLKKVGLVLASYTVRRGVTPFASILQAVMYRYWSARHACPKCGHAWATDMPRHNMNLKKVGLVLASYTVRRGVTPFASILQAVMYRYWSARHACPKCGHAWATDMPRHNMNLKKVGLVLASYTVRRGVTPFASILQAVMYRYWSARHACPKCGHAWATDMPRHNMNLKKVGLVLASYTVRRGVTPFASILQAVMYRYWSARHACPKCGHAWATDMPRHNMNLKKVGLVLASYTVRRGVTPFASILQAVMYRYWSARHACPKCGHAWATDMPRHNMNLKKVGLVLASYTVRRGVTPFASILQAVMYRYWSARHACPKCGHAWATDMPRHNMNLKKVGLVLASYTVRRGVTPFASILQAVMYRYWSARHACPKCGHAWATDMPRHNMNLKKVGLVLASYTVRRGVTPFASILQAVMYRYWSARHACPKCGHAWATDMPRHNMNLKKVGLVLASYTVRRGVTPFASILQAVMYRYWSARHACPKCGHAWATDMPRHNMNLKKVGLVLASYTVRRGVTPFASILQAVMYRYWSARHACPKCGHAWATDMPRHNMNLKKVGLVLASYTVRRGVTPFASILQAVMYRYWSARHACPKCGHAWATDMPRHNMNLKKVGLVLASYTVRRGVTPFASILQAVMYRYWSARHACPKCGHAWATDMPRHNMNLKKVGLVLASYTVRRGVTPFASILQAVMYRYWSARHACPKCGHAWATDMPRHNVGCNPNINMMSMQCKCKCNKCRNVTECLTGRV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-