Basic Information

Insect: Mythimna impura
Gene Symbol: -
Assembly: GCA_905147345.1
Location: LR990350.1:9632130-9641585[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0092 1.4 11.2 1.6 3 23 204 225 203 225 0.96

2 23 0.2 32 7.0 0.3 1 22 610 631 610 631 0.95

3 23 9 1.4e+03 1.8 0.3 1 20 673 692 673 696 0.80

4 23 0.0034 0.53 12.6 4.0 2 22 706 726 705 726 0.93

5 23 0.089 14 8.1 0.1 2 23 734 756 733 756 0.89

6 23 0.017 2.7 10.4 0.2 3 23 777 798 775 798 0.96

7 23 0.00098 0.15 14.3 3.4 1 23 804 827 804 827 0.95

8 23 0.12 19 7.7 0.0 1 23 853 876 853 876 0.90

9 23 0.018 2.8 10.3 3.4 1 23 881 903 881 903 0.97

10 23 0.0083 1.3 11.4 0.2 1 23 909 932 909 932 0.95

11 23 0.0039 0.61 12.4 0.8 1 23 945 967 945 967 0.97

12 23 0.00017 0.027 16.7 1.8 1 23 1017 1040 1017 1040 0.97

13 23 0.0011 0.17 14.1 1.1 1 23 1099 1122 1099 1122 0.96

14 23 0.0023 0.36 13.1 2.1 2 23 1150 1172 1149 1172 0.95

15 23 0.038 6 9.3 0.1 2 23 1178 1200 1177 1200 0.94

16 23 0.0096 1.5 11.2 0.2 1 21 1244 1264 1244 1265 0.95

17 23 0.0004 0.064 15.5 1.0 1 23 1275 1297 1275 1297 0.93

18 23 0.00011 0.017 17.3 0.3 2 23 1390 1412 1390 1412 0.93

19 23 3.8e-07 6e-05 25.0 1.4 3 23 1419 1439 1418 1439 0.98

20 23 0.029 4.5 9.7 0.4 1 23 1457 1479 1457 1480 0.95

21 23 0.18 28 7.2 0.0 1 23 1503 1525 1503 1525 0.97

22 23 0.027 4.2 9.8 0.6 1 23 1531 1554 1531 1554 0.95

23 23 0.00025 0.04 16.1 0.4 1 23 1562 1585 1562 1585 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0092	1.4	11.2	1.6	3	23	204	225	203	225	0.96
2	23	0.2	32	7.0	0.3	1	22	610	631	610	631	0.95
3	23	9	1.4e+03	1.8	0.3	1	20	673	692	673	696	0.80
4	23	0.0034	0.53	12.6	4.0	2	22	706	726	705	726	0.93
5	23	0.089	14	8.1	0.1	2	23	734	756	733	756	0.89
6	23	0.017	2.7	10.4	0.2	3	23	777	798	775	798	0.96
7	23	0.00098	0.15	14.3	3.4	1	23	804	827	804	827	0.95
8	23	0.12	19	7.7	0.0	1	23	853	876	853	876	0.90
9	23	0.018	2.8	10.3	3.4	1	23	881	903	881	903	0.97
10	23	0.0083	1.3	11.4	0.2	1	23	909	932	909	932	0.95
11	23	0.0039	0.61	12.4	0.8	1	23	945	967	945	967	0.97
12	23	0.00017	0.027	16.7	1.8	1	23	1017	1040	1017	1040	0.97
13	23	0.0011	0.17	14.1	1.1	1	23	1099	1122	1099	1122	0.96
14	23	0.0023	0.36	13.1	2.1	2	23	1150	1172	1149	1172	0.95
15	23	0.038	6	9.3	0.1	2	23	1178	1200	1177	1200	0.94
16	23	0.0096	1.5	11.2	0.2	1	21	1244	1264	1244	1265	0.95
17	23	0.0004	0.064	15.5	1.0	1	23	1275	1297	1275	1297	0.93
18	23	0.00011	0.017	17.3	0.3	2	23	1390	1412	1390	1412	0.93
19	23	3.8e-07	6e-05	25.0	1.4	3	23	1419	1439	1418	1439	0.98
20	23	0.029	4.5	9.7	0.4	1	23	1457	1479	1457	1480	0.95
21	23	0.18	28	7.2	0.0	1	23	1503	1525	1503	1525	0.97
22	23	0.027	4.2	9.8	0.6	1	23	1531	1554	1531	1554	0.95
23	23	0.00025	0.04	16.1	0.4	1	23	1562	1585	1562	1585	0.96

Sequence Information

Coding Sequence: ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCTTTGAAAATCAAGGATTGTGTGTCCGTAGAGATAAACGAAAATGACGACCTGCCCACTAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTggcatgtttttaaaaatgtatgtgaAAGGACACAAAACAAACTACAGTCTCTGAAAGATGGCAGCCAACTAGAAGAGgtgaaaataaaaagtgaacCACTATCTGATGAAGCTTATGATGATGGAGTGGTCATTGATGGCTCATATCCTGTCATTGAGAATGCTGCCTTTTCAAACAAATTACAACCTGAAGGTCCCCCAATCTTGGCTTCATTGGGGCTCACACCAAGAAGTGATAAGGGTGCAGAGAGTGAAAACAATGAAGAAGACGAGGAAGAAGTGAATGAGCCCGCACAAAAGTTCCCGAAAATGCCCCACATGCCTGAGGTGTCCATCACAGTCATGAGGCCAACTGGAGAGACTTTGCACGCTCGCCAGGGTATCCACCAACTCGCCTCCAAACTGTGCCTCGTCTGTGGCCGTTCCTACAGGTATTCCCACAACGCACGCAGACATGAACTTACCTCTCACGGCTTCGACAGATATACAAACAAAGTCACTCCTAAAAAAACCCTCAATCATCTACAACCCAAACTTAGACCGAACCCATTCAACCCCAAAGCACGGATGATGCCGAATCCTATTAGCCATAAGATGCAGTTCATGAATAAGAACATGCCAACAAAAATAATGCCTATGAACAAAGTTATTATGCCACAGAAACCCATTCCAATAAAAACGACGACAAAGACACAAAATAATTTGCCTTATCCTCTTCGTATTAAAGCACTCAAAGATTTACAAATCAAGAAAAAAGAGCCTCAGATTCTAAAGACTTTATTAACCTCCAAACCGGAAGTTCTGGTTTCAGAACCAGAAATTCTAAATTCTGGCCCTGAAAGTCCAGAAACATTGATATCTGAACCTGAAATTGCGTCTTTTCAAGTAGAAGCTATTCTTACGGAACCCGACGCCGACGCATATGATGATCCTGAACAAGGTGACGAAGAAGTTGATGAAGAAATGCAGAACAATCAAAGTCAAAATTATGATACAGTTGATATGGACTCTGAGAACGAAATAGAGATTGCTCGTCAGCAAGCAATTGAACACGAAGGTGAGGAAAATGCTGATGGGGAAGAAAATATTGACCATGATGACGATAACAATATGGAAGGCGCCCAAAGTGACAACGAGAAAGATGGTAATGACGATACAGTTGAAAGTCAAGAGAACATGGAAGAAGAAGATAGTATTGAAGTAAAACCAGATCAAATAAAGGACGACGAGGAACAAGAGGAGGGAGGGCATGAAGAAGTAGAGATGAATCATAACGAGAATGAGGACGACGATGATGATGAGCTTCCAATATCATTAGCGCCAGTCGTCGAAATAAATGAAGGTTTGCAAGTTAACTCGTTTAACAGCGAAGCCAATGAAGAAGACGAGGAACTCGACGAAACTGTCGATCCTAATGACACCATTGAAGAGGAAGAGCAGCCGGTTAAGGAACTCGACCCTGACAAAACATATGTTACAAAAACCCAAAGAGACTTCATCCAAAAATATCGCGACATCATTCAGCAAATCAACACGAAACGCTGTTTGTGTTGTGACCGTGAACATCCGCGCAGAAAAGCTGTAATACAACACTTGCAGAAAAATGGACACAAGGTACCAAAGCACACGTGTTATAATTGTGTCATCACTTTCGGTCATATTGGCGCACTACTCAGTCATATGAGGTCAAATTCTTGCACTAATTTGTGGAAGATTATTTACAATGAAAATGGCATTACCGACGACTTGGTACTCGAAGATGAACCTAAAGAAGTCAAGGTCGCTTACAAAGATATTTTCAATGCCAGATCATATGCTTGCAAACTCTGCCCAGCTAAATTCCAGCTGAAACAGTTTATTATGAAGCATGTAGCGGATACTCATGAAGATGGACAATCTAGGGTACCGCTCTGTTGTGTCCATTGTCGTGCTAGGTTCAAAGATAAGAGTTTACTTAAGAAACATATTCGTAAAGGTGATTGTATGGTTTATATATCATGTGATTTATGCTCTGAAACATTCAGGAATATGCAAGATTTTAACGACCATGCGTTAGCTGTCCACGCTGGCAGTCTCGATCAGTCAGATAATCAGAGCAAATGTGTTGATGGTCGGCCAACAGACTGTCCTTTGTGCGGGAAGAAAAACAGCAGCTATCCGAATTTAGTGAAACATTTGAAGATCATACATGCTGAGGAGAAACCTCATTACTGCCAACATTGCGACGCTAAATTCGAACAATCTAATGATCTGAACAAACATATTTACATGGAGCATTCGGATAGAACATTAGGCATGCCGCCTGCTGAACCGGATATGTCCATAGTGAAAGAAGAAGCTGAAGAGTATCATTACTCCTGTACAGAATGTAATGCTATTTTCGAAACTGTTGATGCGTGGACTGATCACCAAGTCGCAGAACATAACCAAGTGGCCCACCACTGCGACCAGTGTGAGAAAAAATTCCTGCGTCCTTCAGAGCTGGCGGAGCATAAGAACACTCACTTAAGGGTTAAGTTCTATCCTTGCAGTGTATGCCCCAACTCTTACAGCACTCCACAAAAACTGTCCGAGCATGTGCAACAGTCACATCCAGGTATTGGCGCAATCGCGGCAGCTGAGTCTGAATTCTTCTGCGACATCTGCATTAGAGCATTCAAGAGTCGCCAAGCTTACTCAAATCATATGCGAATTCACGCTAAAGTACCTACTACTAACAGGAAACCAACTACAGCCAAAGAGGGATTTGCGCCTCAAATTATCGGGAAACCTATCAAACAATATCCTATGGTTCAACCTGGTTTTGTATCATTCAAACCTAATTACAACATCCCTAATGCTCCATATTCCTGTGACATTTGTGGTAAAGGGTTCATGCACAAGAAAAATATATGGAAACATAAGAAAGTGCTACATGCCGATATTTTAGTCGATAGACATGATAGTGAAGAGAACACTATGCAAGCATCCACCGAAGAGGATGAATTCAATCCTGATGAGAATGGTTCTATTCTTTCAACACCACAATTTAATAGTTTCAACTTCACGAATTTCCCGAACAATACTCAACAAACAGCACCAGAAATGCCTTATGAATGTGATTTATGTAGCAAACGGTTCCCGCTTAGGACCAGTTTGTGGAAACATAAGCGCGCTAAACATGGAATTGTCAACCCTAGCACTAGTGGTAGCATCGACCCAACATCCACGCCATCCGCTAGCGGAGAAGGCAGTAGCAGATCTAGCTGCACTATATGTAGAATCACATTTTCAGACAAGAAATCTTATTATCGCCATCGAAAGAATGTCCACAAATCTACCGTTCAAATGTGCAAAATATGTGGAAAACCGTTAAGTTCAACTTTAGAACTATACGAGCACTTGAAAGCCGCCCATGCAAGGGAATTACTGGGTTTTAACACTAACCAAGGTTCCAGTAAATCACAAGATGTGACGCAAGACATTGAACCTGATTATGAAAATGATCAGGAGTCTGCCGACCCTAGTGTCGATTACCAAGCTCGCTACCCATGCGATACTTGTGGCAAACAATTCGTTGGTTTGTTAGCATTGCAGAACCACCAGTGCATCAACCAGGTGTCATCACAGCCACAGACATTTGACTGTGAAATTTGCCATAAGAGCTACACTTCTATATCTGCATTAAAAAGCCATCGTGGATGGCATTTACGTTCGCCCGATGGAAAGGCAGCCGCCAATAACTCCGGCCTTTGGATGCCTCAGCACAAAGTTACCAGCAAAATAAGTAAACACGAAGTTATCGACCCGTCTCAACTTGCGAAGGTCACACATACTCCTACTCCCCCTCCTGTCACTGCGACCGTAGCGAAAAGACGACTACCACCAGAGGTTGAAGTGACGGTCGTAAATCCAAACAAGAAATTGCGCTCAGACGACTCGGTCGACATGGATTTGCAAAATTCTGGTACAATCGAGGATAGGTACTGTACGATTTGCGACAAGGAATTTACAAAACGAGCGGCGTATCAGCGCCACATGGACGAAGTACATCAACCGAACTCCGTGTTTTGTCCGGTCTGTGATAAGAGTTTTACAAGGAAATCCACATTACTCATTCACATGAAGAAACACTACGAGAGCGGTGAGGGCAGTTCCTCAGCTACAGGCCAAGGGGACGATGATTTCTCGTGTGATTTGTGTGGCGCTCAGTATGACAATGATCAGGCGTTGAGGGCGCACCGAGCGCGGCACCATGGAGAAGATGAAGAGTCGGCAGAAGAGAGTGATGACGGAAATGTTCCTATAGCTCCTCCCGGCGAATTTACATGTGCGCAATGCGGTGATGGAGTTGCTACACCTAGGGACCTCATCGCCCATCGCACTATGCACGCTACTCCCACCAAATTCTTCTGTAACATTTGCAAAGTGTACTTCGCTCGGGCGCTTGACCTCTCCTCGCATACTCGGGCGCGACATGCTGACAACGAAAAGGTATTCTTCCCGTGTGCCATGTGCGATAGGTTTTACATGAACAAGAAGAGTTTACAGCGGCACATTGAGATGGTTCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLALKIKDCVSVEINENDDLPTNVCRKCMDNVNNWHVFKNVCERTQNKLQSLKDGSQLEEVKIKSEPLSDEAYDDGVVIDGSYPVIENAAFSNKLQPEGPPILASLGLTPRSDKGAESENNEEDEEEVNEPAQKFPKMPHMPEVSITVMRPTGETLHARQGIHQLASKLCLVCGRSYRYSHNARRHELTSHGFDRYTNKVTPKKTLNHLQPKLRPNPFNPKARMMPNPISHKMQFMNKNMPTKIMPMNKVIMPQKPIPIKTTTKTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILTEPDADAYDDPEQGDEEVDEEMQNNQSQNYDTVDMDSENEIEIARQQAIEHEGEENADGEENIDHDDDNNMEGAQSDNEKDGNDDTVESQENMEEEDSIEVKPDQIKDDEEQEEGGHEEVEMNHNENEDDDDDELPISLAPVVEINEGLQVNSFNSEANEEDEELDETVDPNDTIEEEEQPVKELDPDKTYVTKTQRDFIQKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTNLWKIIYNENGITDDLVLEDEPKEVKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVADTHEDGQSRVPLCCVHCRARFKDKSLLKKHIRKGDCMVYISCDLCSETFRNMQDFNDHALAVHAGSLDQSDNQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHAEEKPHYCQHCDAKFEQSNDLNKHIYMEHSDRTLGMPPAEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHPGIGAIAAAESEFFCDICIRAFKSRQAYSNHMRIHAKVPTTNRKPTTAKEGFAPQIIGKPIKQYPMVQPGFVSFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILVDRHDSEENTMQASTEEDEFNPDENGSILSTPQFNSFNFTNFPNNTQQTAPEMPYECDLCSKRFPLRTSLWKHKRAKHGIVNPSTSGSIDPTSTPSASGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLSSTLELYEHLKAAHARELLGFNTNQGSSKSQDVTQDIEPDYENDQESADPSVDYQARYPCDTCGKQFVGLLALQNHQCINQVSSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIDPSQLAKVTHTPTPPPVTATVAKRRLPPEVEVTVVNPNKKLRSDDSVDMDLQNSGTIEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSATGQGDDDFSCDLCGAQYDNDQALRAHRARHHGEDEESAEESDDGNVPIAPPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMVH*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00852035;
90% Identity: iTF_00852035;
80% Identity: -