Mimp032431.1
Basic Information
- Insect
- Mythimna impura
- Gene Symbol
- Lztr1
- Assembly
- GCA_905147345.1
- Location
- LR990354.1:7501495-7527549[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 1.8e-13 1.5e-10 43.0 0.1 4 109 358 502 355 503 0.85 2 9 1.2e-08 1e-05 27.4 0.0 9 44 634 668 629 680 0.87 3 9 4e-06 0.0033 19.4 0.1 13 44 679 709 670 718 0.80 4 9 4.2e-06 0.0035 19.3 0.1 13 44 720 750 713 759 0.80 5 9 4.2e-06 0.0035 19.3 0.1 14 44 762 791 755 802 0.80 6 9 3.8e-06 0.0032 19.4 0.1 13 44 802 832 794 843 0.80 7 9 4.8e-06 0.004 19.1 0.1 14 44 844 873 839 882 0.80 8 9 3.6e-14 3e-11 45.3 0.0 13 97 884 968 876 983 0.82 9 9 2.2 1.8e+03 0.9 0.0 77 106 982 1011 977 1014 0.80
Sequence Information
- Coding Sequence
- ATGATAACGGAGCAGCTCCGTAATCCCAATGAGTTAGACATCAGCCTCAGAATGGAGTTTGGGCCTTTTGAGACGGTACACAAGTGGAAACGAATGTCTGAATGCTATGAGTTTGTTGGTGCTAGGAGGAGCAAACACACAGCTGTAGCTTACAAAGATGCGATTTATGTATTTGGGGGTGACAATGGCAAATCCATGTTAAATGATCTGATCAGATTTGACATCCGGGAGAAGTCTTGGACAAAGACTGGCTGCATGGGTGTTCCGCCCGCACCTCGGTATCATCATTCAGCTGTGGTGCATCGTTCTTCAATGTTCGTGTTCGGCGGCTACACCGGCGACATCCTCGCCAACTCGAACCTGACCAACAAGAACGATCTGTTTGAGTACAAGTTCCCCAGTGCACAATGGGTGCAATGGAAGTTTACCGGACAAGAGCCAGTGCCTCGGTCAGCACACGGCGCCGCGGTCTACGACGACAAGCTCTGGATATTCGCGGGGTACGACGGTAATGCAAGACTTAACGATATGTGGACCATCAACTTGTTGGGAGAAAATCACCAATGGGAGCGAATCGAACAGAAGGGTCAATGTCCCCCGACGTGCTGCAACTTCCCCGTGGCCGTCGCGAGAGGGAAGATGTTCGTGTTCAGTGGTCAGAGCGGCGCTAAGATCACTAACGCGCTGTTCCAGTTTGATTTCGAGACTCATACGTGGAGCCGCGTGTGCACGGAGCACCTGCTGCGCTCGGCGGGCGGCGCGCCGGCGCGGCGCTACGGCCACGTGATGGTGGCGCACCGCGCGCACCTCTACGTGTTCGGCGGCGCCGCCGACAACACGCTGCCCAACGACCTGCACAAATACGACCTGGACACGCAGATATGGTCGGTGGTGGCTCCTGCAGGCGAGTCCCAGATCCCGTCGGGGCGGCTGTTTCACGCGGGCGCAGTGGTCGGGGACGCACTCTACATCTTCGGGGGTACCGTCGACAATAACGTGCGCAGCGGGGAGCTGTTCCGCTTCCAGTTATCAAACTACCCACGCTGCACGCTACACGATGACTTCGGTCGCATCTTGAAGTCTCATCAGTTCTGCGACGTGCAAATTTTAGTGGGGCCTGAAAAAACGTCTATATTGGCGCATCAGGCCATATTAGCCGCCCGATCGCAATTCCTACGAGCTAAGATcaaGGAAGCTCGAGATGAACTAACAAAACGCATCGCCGCCGGCGAGGAGGAAGCGTCAGAAGTATGCTCGTACAAGACTCCGCCCCAGCTGTGCGTGTTGCTGCCCGAGGCGACGCCCGAGTCGTTCAACATGGTGCTCAACTACATATACACCGACAGGATAGACCCCACTGAGAAAGTTTCATCCACACCGGTGTCGGCAGACGAGGACCCGGCGTCCCCGGCCACCGTGCTGCTGGTGATGGCGGTGCTGCGCCTGGCGCTGCGGCTCAACATCCCGCGCCTGCGCGGCCTGTGCGCGCGCTTCCTGCGAGCCAACCTCTGCTACGGCAACGTGCTGCAAGCGTTACACGCCGCGCACCACGCCAACCTCACGTGTATCAAAGAGTACTGTTTGAGATTCGTAGTGAAAGACTACAACTTCACTCCGATAGTGATGTCGAAAGAGTTCGAGGAAATGGAACAGAGCTTGATGGTGGAAGTGATCCGTCGACGGCAGCAGCCGCCGCCCAAGCAGACCAACGCGGTCGTACAGCAGGAATACGATGAAGAGATTATCGGAAGAATCGCCATCCCTGCCGTACTGCGTTGTGCTTTCGAATCAAGAGGCCGACGCAGGAAAGAGCTCAACGATCGATCGGATTTGAAATGTGTGTTGTTTGTAGGAACAACTCTGGAGCAAGACATGTGCGTGCTGCTGGGTGGCGGCGCCGAGCTGTCGGATGTGCGCCTGCGTGTGGGCGCGGCGTCGCGGCCCGCGCACCGCTCCGTgctggcggcgcgcgcggccTACTTCGAGGCCATGTTCCGCTCCTTCTCGCCGCACGACAACATCGTCAATTGTTGTACTACTGTACTACTGGGCGCGGCGTCGCGGCCCGCGCACCGCTCCGTgctggcggcgcgcgcggccTACTTCGAGGCCATGTTCCGCTCCTTCTCGCCGCACGACAACATCGTCAATTGTTGTACTACTGTACTACTGGGCGCGGCGTCGCGGCCCGCGCACCGCTCCGTgctggcggcgcgcgcggccTACTTCGAGGCCATGTTCCGCTCCTTCTCGCCGCACGACAACATCGTCAATTGTTGTACTACTGTACTACTGGGCGCGGCGTCGCGGCCCGCGCACCGCTCCGTgctggcggcgcgcgcggccTACTTCGAGGCCATGTTCCGCTCCTTCTCGCCGCACGACAACATCGTCAATTGTTGTACTACTGTACTACTGGGCGCGGCGTCGCGGCCCGCGCACCGCTCCGTgctggcggcgcgcgcggccTACTTCGAGGCCATGTTCCGCTCCTTCTCGCCGCACGACAACATCGTCAATTGTTGTACTACTGTACTACTGGGCGCGGCGTCGCGGCCCGCGCACCGCTCCGTgctggcggcgcgcgcggccTACTTCGAGGCCATGTTCCGCTCCTTCTCGCCGCACGACAACATCGTCAATTGTTGTACTACTGTACTACTGGGCGCGGCGTCGCGGCCCGCGCACCGCTCCGTgctggcggcgcgcgcggccTACTTCGAGGCCATGTTCCGCTCCTTCTCGCCGCACGACAACATCGTCAATATACAAATCTGCGACACGGTACCGTCGGAGGAGGCGTTCGACTCGCTGCTGCGATACATCTACTACGGCGACACCAACATGCCCACAGAAGACTCGCTGTACCTGTTCCAAGCGCCGATATATTATGGTTTCACAAACAACCGCCTGCAAGTATTTTGCAAGCACAACTTGCAGAGCAACGTGTCGCCGGAGAACGTGCTCGCGATCCTGCAAGCTGCGGACCGCATGCGCGCGACCGACATCAAGGAGTACGCGCTCAAAATGATCGTGCATCATTTCGGCCTTGTGGCGAGGCAAGACGCCATCAAGAACTTGGCGCAACCGCTCCTGGTCGACATCATCTGGGCGCTGGCCGAGGAACCGCACTTCGACTCGCCTCTCCCGGTGCAGCCGAGGTCGTTGCCCTCGTCCTCATCAGCTGACACGCTCACAGACGACCCCGAGTACTCGAGACATAGATGCGGAAAATCATAG
- Protein Sequence
- MITEQLRNPNELDISLRMEFGPFETVHKWKRMSECYEFVGARRSKHTAVAYKDAIYVFGGDNGKSMLNDLIRFDIREKSWTKTGCMGVPPAPRYHHSAVVHRSSMFVFGGYTGDILANSNLTNKNDLFEYKFPSAQWVQWKFTGQEPVPRSAHGAAVYDDKLWIFAGYDGNARLNDMWTINLLGENHQWERIEQKGQCPPTCCNFPVAVARGKMFVFSGQSGAKITNALFQFDFETHTWSRVCTEHLLRSAGGAPARRYGHVMVAHRAHLYVFGGAADNTLPNDLHKYDLDTQIWSVVAPAGESQIPSGRLFHAGAVVGDALYIFGGTVDNNVRSGELFRFQLSNYPRCTLHDDFGRILKSHQFCDVQILVGPEKTSILAHQAILAARSQFLRAKIKEARDELTKRIAAGEEEASEVCSYKTPPQLCVLLPEATPESFNMVLNYIYTDRIDPTEKVSSTPVSADEDPASPATVLLVMAVLRLALRLNIPRLRGLCARFLRANLCYGNVLQALHAAHHANLTCIKEYCLRFVVKDYNFTPIVMSKEFEEMEQSLMVEVIRRRQQPPPKQTNAVVQQEYDEEIIGRIAIPAVLRCAFESRGRRRKELNDRSDLKCVLFVGTTLEQDMCVLLGGGAELSDVRLRVGAASRPAHRSVLAARAAYFEAMFRSFSPHDNIVNCCTTVLLGAASRPAHRSVLAARAAYFEAMFRSFSPHDNIVNCCTTVLLGAASRPAHRSVLAARAAYFEAMFRSFSPHDNIVNCCTTVLLGAASRPAHRSVLAARAAYFEAMFRSFSPHDNIVNCCTTVLLGAASRPAHRSVLAARAAYFEAMFRSFSPHDNIVNCCTTVLLGAASRPAHRSVLAARAAYFEAMFRSFSPHDNIVNCCTTVLLGAASRPAHRSVLAARAAYFEAMFRSFSPHDNIVNIQICDTVPSEEAFDSLLRYIYYGDTNMPTEDSLYLFQAPIYYGFTNNRLQVFCKHNLQSNVSPENVLAILQAADRMRATDIKEYALKMIVHHFGLVARQDAIKNLAQPLLVDIIWALAEEPHFDSPLPVQPRSLPSSSSADTLTDDPEYSRHRCGKS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -