Basic Information

Insect: Mythimna impura
Gene Symbol: Lrrfip2
Assembly: GCA_905147345.1
Location: LR990350.1:3393801-3424578[-]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.044 2.8e+03 -0.9 0.6 44 91 54 102 37 107 0.78

2 9 4.9e-22 3.2e-17 64.6 1.5 1 55 122 176 122 206 0.84

3 9 1.6e-60 1e-55 191.0 5.4 55 275 232 449 219 466 0.86

4 9 0.17 1.1e+04 -2.8 20.6 1 71 467 556 467 563 0.72

5 9 0.25 1.6e+04 -3.4 19.3 2 71 615 703 614 710 0.72

6 9 0.25 1.6e+04 -3.4 19.3 2 71 762 850 761 857 0.72

7 9 0.21 1.4e+04 -3.1 19.5 2 72 909 995 908 1001 0.79

8 9 1 6.5e+04 -12.9 24.7 2 97 1050 1149 1049 1150 0.75

9 9 1 6.5e+04 -6.2 11.9 9 151 1104 1143 1098 1170 0.52

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.044	2.8e+03	-0.9	0.6	44	91	54	102	37	107	0.78
2	9	4.9e-22	3.2e-17	64.6	1.5	1	55	122	176	122	206	0.84
3	9	1.6e-60	1e-55	191.0	5.4	55	275	232	449	219	466	0.86
4	9	0.17	1.1e+04	-2.8	20.6	1	71	467	556	467	563	0.72
5	9	0.25	1.6e+04	-3.4	19.3	2	71	615	703	614	710	0.72
6	9	0.25	1.6e+04	-3.4	19.3	2	71	762	850	761	857	0.72
7	9	0.21	1.4e+04	-3.1	19.5	2	72	909	995	908	1001	0.79
8	9	1	6.5e+04	-12.9	24.7	2	97	1050	1149	1049	1150	0.75
9	9	1	6.5e+04	-6.2	11.9	9	151	1104	1143	1098	1170	0.52

Sequence Information

Coding Sequence: ATGGGACAGCGCTCAGAGGTGGCCACGCCTGAAAATAGTGACGAGGAGAGCGGAGACGCCTTCACTGATGGAGATTTTGGTGATTCCGATGACGAAACAATAGTGGAACGCCTTGATGAAGCTAAGCCTGCTCACATACCGATCAATGAAGCTGTAAAAGATGATATCCAGAAGAGTGCTGCTACTAATGGTCACTCTAATGGTAGTATAGATGAGCAGACCAGAATGAATGGCCGTAAGAACAGTGAAGCTCATTCGAGTGATATGGAAAACCAAAGCTTAGTGTTATCGGATTTGCGCCGAGATTCACACGGCGATCAGAATCCTTCAATCGTTGGCATTCTCGGCGACCAGCAGAACCATGCGGAGCAGAGGTTAGCAGCGCGACGAGCGGCGCGGGCTGAGGCGCGAGAGATACGCATGCGCGAACTTGAGAGACAGCAGCGCGAACAGGAGGACCATGCGGATAAGGCATACGATATGTATGCCGGCAAGACTCCAGGTAAGTCCTGTAGTAACTTCCAGCTCATATCTCCTAAATTAGCCAAGTTACCAGGTACTGTGGCATCAAATGCGCCAGATAAGACCTGTAGTATAGTAAACACCAGTAAGCATATAGTCATATGTACACATTTGTGCAGGCAAGGCACCAGTTATGTGTTTCGGTTTCCAGAGACGGTGGGTCGTCGCGGGGCCACGAGGCTAACGGCGCTCAGCCCGGCCGTGCACTCTCCGAGGCGAAGCTCGGAGGACTCTGTCGATGATGGCTTCAGCATGAAGGACCTAAGGCACGAGTTGAAGGAGGTTGAAGAGAAGTTCCGCAAGGCGATGATCCTGAATGCGCAGCTAGATAACGACAAGGCGGCGCTCGGCTACCAGCTAGAGTTGCTCAAAGACAGGATAGAGGAACTGCACGAGGAGTACGCGCAGCTGCAGCGCGAACACAGAGAAAAGTGCTCATCATTCGAGCGGCTAAAGCGTGAGCACGAGTCCGTAAGCCGCGAGCTGGGCGCCGCGCGGGACGCCGTGCGCGCGCGGGACGCCGCCGCGGAGGGCGCCGGCTTCGCCTTCGTGGACGCCGCCGCGCTGGAGCCGGCCGCGCGCGGGGCCGCGGGCGCCGGCGTGGGCGTCGTGCCTGCACTGGCACTGGTCACGCAGCAGGCGCACCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGACGTGCGGTTGCAAAAGCTGTTGAGTTCGAAGCAGGCGCTAGAGTCGGAAGTCCGCAAGTTGAAGCTGCAGCTCAACGAAGAACGCGCCGCGCGGCAGAATGGAGTCGCCAACCATCACGACCAAGAGTACGAGAATGAACTAGAAACAGTCCGCAAGGCAGTATCGGAGGCAAAGGGCCGCGCGGCGCGGGCGGAGGCCGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTCGAGGCGCAGCTCGCGCGCCTGCGCGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGTAAGCTTACCGTCGGTGGCGCAGGCGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTCGAGGCGCAGCTCGCGCGCCTGCGCGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGCGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTCGAGGCGCAGCTCGCGCGCCTGCGCGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGTAAGCTTACCGTCGGTGGCGCAGGCGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTCGAGGCGCAGCTCGCGCGCCTGCGCGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGTAAGCTTACCGTCGGTGGCGCAGGCGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTCGAGGCGCAGCTCGCGCGCCTGCGCGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGCGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTCGAGGCGCAGCTCGCGCGCCTGCGCGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGTAAGCTTACCGTCGGTGGCGCAGGCGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTCGAGGCGCAGCTCGCGCGCCTGCGCGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGTAAGCTTACCGTCGGTGGCGCAGGCGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTCGAGGCGCAGCTCGCGCGCCTGCGCGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGCGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTCGAGGCGCAGCTCGCGCGCCTGCGCGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGTAAGCTTACCGTCGGTGGCGCAGGCGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTCGAGGCGCAGCTCGCGCGCCTGCGCGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGTAAGCTTACCGTCGGTGGCGCAGGCGAGGCGGCGCTGCAGGCGGCGCGCCTCGAGGCGCAGCTCGCGCGCCTGCGCGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGCGAGGCGGCGCTGCAGGCGGCGCGCCTCGAGGCGCAGCTCGCGCGCCTGCGCGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGTAAGCTTACCGTCGGTGGCGCAGGCGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTCGAGGCGCAGCTCGCGCGCCTGCGCGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGCTTACCGTCGGTGGCGCAGGCGAGGCGGCGCTGCAGGCGGCGCGCCTCGAGGCTCAGCTCGCGCGCCTGCGCGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGCTCGGGAAGCTCTCAACCGGGTTGAAGAGTTGGAGACAGAGAATAGCCACCTCACGAAACGACTCGACAAGCTCAAGAACGCGAAGTCTGCGCTCCTCAAGGACCTGTGA
Protein Sequence: MGQRSEVATPENSDEESGDAFTDGDFGDSDDETIVERLDEAKPAHIPINEAVKDDIQKSAATNGHSNGSIDEQTRMNGRKNSEAHSSDMENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPGKSCSNFQLISPKLAKLPGTVASNAPDKTCSIVNTSKHIVICTHLCRQGTSYVFRFPETVGRRGATRLTALSPAVHSPRRSSEDSVDDGFSMKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVSRELGAARDAVRARDAAAEGAGFAFVDAAALEPAARGAAGAGVGVVPALALVTQQAHQLLNDAGEGTLDVRLQKLLSSKQALESEVRKLKLQLNEERAARQNGVANHHDQEYENELETVRKAVSEAKGRAARAEAEAALQAAHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREVSLPSVAQARRRCRRRTWRASRRSSRACAPARTTRTSTRSSSSRRGASCRERRGGAAGGARGAPRGAARAPARPPGPPGRARGAAQAGEAQAAERGKLTVGGAGEAALQAAHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREVSLPSVAQARRRCRRRTWRASRRSSRACAPARTTRTSTRSSSSRRGASCRERRGGAAGGARGAPRGAARAPARPPGPPGRARGAAQAGEAQAAERGKLTVGGAGEAALQAAHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREVSLPSVAQARRRCRRRTWRASRRSSRACAPARTTRTSTRSSSSRRGASCRERRGGAAGGARGAPRGAARAPARPPGPPGRARGAAQAGEAQAAERGKLTVGGAGEAALQAAHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREVSLPSVAQARRRCRRRASRRSSRACAPARTTRTSTRSSSSRRGASCRERRGGAAGGAPRGAARAPARPPGPPGRARGAAQAGEAQAAERGKLTVGGAGEAALQAAHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQRELTVGGAGEAALQAARLEAQLARLRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -