Mimp021685.1
Basic Information
- Insect
- Mythimna impura
- Gene Symbol
- -
- Assembly
- GCA_905147345.1
- Location
- LR990347.1:7101620-7102021[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.8e-11 2e-08 35.6 0.2 4 43 7 45 4 46 0.94
Sequence Information
- Coding Sequence
- ATGACTGACAAACAGAAGGCCATATTAAAGGCCATGGAGGCAGTTAGAAAAGGAGCCTCAATTTCAGCTGCAGCCAGGCAGTACAATATTCCACGGTCAACGTTGGACGACAAAATACGCGGCCGCTATTCTGTTGAATGTTCCAAAGGACCTGCTACAGTTTTgtcaaaagaagaagaagatcattTAAGAAGATGGTTAATTTTTATGGCAGATAGTGGTTTTCCTATAACTAAGGCGCAATTGTTGGATAGTGTaagtttacttattaaaaaattgaaGCGAGAAAACCCTTTTAAAAATGGCAGACCAGGTCGTCACTGGTTTGAAGCCTTCATAAAGCGGCACCCTGAAGTAGGCCAGCGAGTGGCCCAAAATCTGACGCAAACCCGTGCAGGTTAG
- Protein Sequence
- MTDKQKAILKAMEAVRKGASISAAARQYNIPRSTLDDKIRGRYSVECSKGPATVLSKEEEDHLRRWLIFMADSGFPITKAQLLDSVSLLIKKLKRENPFKNGRPGRHWFEAFIKRHPEVGQRVAQNLTQTRAG*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01025979;
- 90% Identity
- iTF_01025988; iTF_01026059; iTF_01025979;
- 80% Identity
- iTF_01025979;