Mimp014230.1
Basic Information
- Insect
- Mythimna impura
- Gene Symbol
- -
- Assembly
- GCA_905147345.1
- Location
- LR990342.1:16884485-16884868[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.3e-11 1.8e-08 35.7 0.2 4 43 7 45 4 46 0.94
Sequence Information
- Coding Sequence
- ATGACTGACAAACAGAAGGCCATATTAAAGGCCATGGAGGCAGTTAGAAAAGGAGCCTCAATTTCAGCTGCAGCCAGGCAGTACAATATTCCACGGTCAACGTTGGACGACAAAATACGCGGCCGCTATTCTGTTGAATGTTCCAAAGGACCTGCTACAGTTTTgtcaaaagaagaagaagatcattTAAGAAGATGGTTAATTTTTATGGCAGATAGTGGTTTTCCTATAACTAAGGCGCAATTGTTGGATAGTGTaagtttacttattaaaaaattgaaGCGAGAAAACCCTTTTAAAAATGGCAGACCAGGTCGTCACTGGTTTGAAGCCTTCATAAAGCGGCACCCTGAAGTAGGCCAGCGAGTGGCCCAAAATCTGTAG
- Protein Sequence
- MTDKQKAILKAMEAVRKGASISAAARQYNIPRSTLDDKIRGRYSVECSKGPATVLSKEEEDHLRRWLIFMADSGFPITKAQLLDSVSLLIKKLKRENPFKNGRPGRHWFEAFIKRHPEVGQRVAQNL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01025988; iTF_01027237; iTF_00147366; iTF_01027238; iTF_01027242; iTF_01027252; iTF_01027253; iTF_01027254; iTF_01026059; iTF_01028199; iTF_00124180; iTF_00124177; iTF_00124178; iTF_00124179; iTF_00124186; iTF_01025981;
- 90% Identity
- iTF_01025981;
- 80% Identity
- iTF_01025981;