Mimp049698.1
Basic Information
- Insect
- Mythimna impura
- Gene Symbol
- arid5b
- Assembly
- GCA_905147345.1
- Location
- LR990365.1:875991-894019[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.2e-14 2.1e-10 42.6 0.0 3 89 238 311 236 311 0.88
Sequence Information
- Coding Sequence
- ATGTCAACAGAGACGAGCCAGGATGAGGTCCTCGCCATCAACGACAAGGTGGTCCTCCGGGCTGACGACCTGCTGTCCTGGATGTGCGTGGGCACGGAGTGGCGCTGGGGGCTGCGCGCGGTGTGGCGCGGCGCCTGCGCCCCGCCCGCTGAACTGCCGCGCCACGCGCCCCTCACGCACACCAAGCTGGACTTCAGTGATGTTGATACTGAGAAGAGTTCCATTGtGGTGGACGAAGAAGCACCTGGCGTGGTAGTCTTCTCGTACCCTCGGTATTGCCGCTACAGGGCGCTGATAGCCAGGCTGGAGGGCATCCAGGCTTCCTGGCTACGGGATTCCTTGGTGGCAGCGCTCGGGGGGTATGCTGCTCCCACCAGAAACACCAGGATACTGTACTGCAAGGACACATTCGAGTATCCCGAGCTGGAGGGCCACGAGTTCGTGTGCAACCACATGGCGCCGCGCCTGAAGGGGAGGCCGCGCGGGCGCCGGCGCCGCGCCGTGTCGCCCGAGCGCGCGCACGAGCCGACCGACGCGGCCGACACGGCCGACGCGGCCGACAGATCCGACCGCTCCGACTCCGACGAGCCGCCCGGCCCGCCCGCCAGCGACCCGCCGACGCCCCGACGTCTCTCCCTCCGCAACGGCGCTCCCCCACCCAGCGATGAAGATGAAGAAGACTACAAGAGAGTAGAACAGACTCCTGAAGACAGAGCCTTCCTGCAGCAGCTCAAGATGTTCCACAGGTCGCGCAGCGAACCCTTCAAGAGTGGACACACTCTGAAGCactTGTCCCTGCGCGCGCTGTACATGTCGGTGGCATCACGAGGTGGCTATGAGGCGGTCTGTCGCCACCAGCTCTGGCGCGCCCTGAGTGCTGACCAGCCCGCCAGGACCAGGAGACACTACGAGAGATTTCTCCTCCCCTTCGAGAACCACGAGCGACGCAACGGTTCCTCCTTCAAACTAAACGGCAAGATGGACGCCGAGCCGCGCACCATCGCTACCATCGACGTGACCGACTCCCCGCGACGCGACGACGACAAAGTGCTGCGCACCCCCTCCCCCCCGCCACGATACGACTACGACAAGATCACCAACTACGACATCCCCGACGTTGACAGCGAAACAGGAGAAATCACCACCAAAGATGACATCATAGTCAAAAACGCAGAGGAATTGAACAGAGAGTTCTTAGAGTCTTTACCTAAAGAGGAGAAAACTGTCAAAATATCTGTCAAACCGGTTGAGAAGTTGATTGAGCCGGGCAAGTTTGAGGGCTGTTTGGAGGGCGTCAAGTCGGAGGGAACCAAGGAGGAAATCAGGGATTTTAGTCAGAACTACTTGAGTGATATGCAGAAATTTAACATGGGAGCCGAGTCGTTCTCGTCCCGGGCGACGCCTCTCAACGGCCACGCCGCGCCCGCACCCACCGACCTTAAGACGTCCCGCCCGGCGGGGCGCAGCTCGCTGCGCGCGGTGCGTGTGAAGCCGGCGCGCCCTCACCTGCTGCACGCGCCGCCCGCCACCACGCCGCACCCGCTGCGGCCGGCGTCCGTGTCGTCCCCCGCGGCGCCGGCGCCCGCCCCGCCGCCGCCCCCCGCGCCTCACTCTGCGCCCCCCGCGCCGCACTCTGCGCCCCCAGCTAATAACTTCGGCATCCACCGCCCTCCACCCCCAGGAGATGACGACATCGTCGAGGTCCCCTACAAACCAAAAACCCCAGAAATCATTGACTTGGACGAGTACCCGGAGAGCCCCCAGGCGGTGAAGAGGAAGAAGCTCGACATCCTGAAGCAGCGCGGCCTCGAGGTGACCGCGCTGCCGCCCCCCTGGCCCGCCCCCCCTCTCGCTGCGCCGCCCCCCCTCATGCTCAACCCCGCCCTGCAGCACCAGATTATGACGCAGGCACAGCTCTTCCAGATGTACAACATCATCCCGCAGAGCTACGCTAACGGTGTCCAGCCGCCTAAAGTCATCCAGGCGTCTTCTATCTTCGGGTCCTCGGGGCCAGAGAAGACAGTGTACGGCAACCCTAAGGACCCCTTCATGCCGCCCCCGCACATGCTGCACGGCGCGCCACTGAAACCGCTGAAGTCTGCGCCCCCTCCGCCGCTTCCTCAAGACATCCTCGACCTCACCTGCAAGTCCTCCAGCCCACCTCCGCAGAAGCCCGCCGTCGAGATAGTCAGAGTGCCCCCGTCCCCCTCCCCGACGGCACAGAACCTAACAAAGAACTACACTCTAGTCGACGGGAAAGCAGTCGTGGGCTCGAATTTAGAAATAACTTTAGTCAATAAAGCTGCGAGTCCTGGCAAAAACAGGCCTCCGCAGAAGAGGTCCAGCAATGGCAAGTTTATGTCGGCGAAGACTCCGACTCCGCCTAAGGACTCTTACCCGAAATACGCGTCACCGAATTCAGCGCAGAAGAAACCTCCCATCAACATCCCTAACTACCAGATCAGGGAGGACTCATCGCCAACACAGAACCAGGTTCTCCAGAACGCGATGAAGAACCAAAATCTAGCTCAAATAATGGATTTGCAGAAGAACTCAGTTCCTATGAGTTCGTTCATGGACCCTTACGTGGCGCTGTACAGTAGCCTGGCAGGTCAGATGGATCAGAGGCAGCTGGCCATGTATCGCGACCTCATGAGCAATCAGTTCCGCTACCCTGGTCTGCTGAACCTGGGCGTCGCCACTCCCACAACGAAGAATTAG
- Protein Sequence
- MSTETSQDEVLAINDKVVLRADDLLSWMCVGTEWRWGLRAVWRGACAPPAELPRHAPLTHTKLDFSDVDTEKSSIVVDEEAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTRNTRILYCKDTFEYPELEGHEFVCNHMAPRLKGRPRGRRRRAVSPERAHEPTDAADTADAADRSDRSDSDEPPGPPASDPPTPRRLSLRNGAPPPSDEDEEDYKRVEQTPEDRAFLQQLKMFHRSRSEPFKSGHTLKHLSLRALYMSVASRGGYEAVCRHQLWRALSADQPARTRRHYERFLLPFENHERRNGSSFKLNGKMDAEPRTIATIDVTDSPRRDDDKVLRTPSPPPRYDYDKITNYDIPDVDSETGEITTKDDIIVKNAEELNREFLESLPKEEKTVKISVKPVEKLIEPGKFEGCLEGVKSEGTKEEIRDFSQNYLSDMQKFNMGAESFSSRATPLNGHAAPAPTDLKTSRPAGRSSLRAVRVKPARPHLLHAPPATTPHPLRPASVSSPAAPAPAPPPPPAPHSAPPAPHSAPPANNFGIHRPPPPGDDDIVEVPYKPKTPEIIDLDEYPESPQAVKRKKLDILKQRGLEVTALPPPWPAPPLAAPPPLMLNPALQHQIMTQAQLFQMYNIIPQSYANGVQPPKVIQASSIFGSSGPEKTVYGNPKDPFMPPPHMLHGAPLKPLKSAPPPPLPQDILDLTCKSSSPPPQKPAVEIVRVPPSPSPTAQNLTKNYTLVDGKAVVGSNLEITLVNKAASPGKNRPPQKRSSNGKFMSAKTPTPPKDSYPKYASPNSAQKKPPINIPNYQIREDSSPTQNQVLQNAMKNQNLAQIMDLQKNSVPMSSFMDPYVALYSSLAGQMDQRQLAMYRDLMSNQFRYPGLLNLGVATPTTKN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01027084;
- 90% Identity
- iTF_01030918; iTF_01029002; iTF_01028047; iTF_00888000;
- 80% Identity
- -