Lcom036955.1
Basic Information
- Insect
- Leucania comma
- Gene Symbol
- arid5b
- Assembly
- GCA_958295575.1
- Location
- OY282492.1:10401563-10419384[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-14 1.3e-10 42.7 0.0 3 89 231 304 229 304 0.88
Sequence Information
- Coding Sequence
- ATGGACGAGGTCCTCGCCATAAACGACAAGGTGGTCCTCCGGGCTGACGACCTGCTTTCGTGGATGTGCGTGGGCACGGAGTGGCGCTGGGGGCTGCGCGCCGTGTGGCGCGGCGCCTGCGCCCCGCCCGCTGACCTGCCGCGCCACGCGCCCCTCACGCACACCAAACTGGACTTCAGCGATGTTGATACAGAGAAGAGTTCCATTGTCGTGGATGAAGAAGCGCCAGGCGTGGTTGTCTTCTCGTACCCTCGGTATTGCCGCTACAGGGCTCTGATAGCCAGGCTGGAGGGCATCCAGGCTTCCTGGCTACGGGACTCCTTGGTGGCAGCGCTCGGAGGGTATGCTGCTCCCACCAATAATACCAGGATACTGTACTGCAAGGACACATTCGAGTACCCCGAGCTGGAAGGGCACGAGTTCGTGTGCAACCACCTGGCGCCGCGGCTGAAGGGGCGGCCGCGCGGgcgccggcgccgcgccgcgTCGCCCGGGCTGGCGGCGCCGCGCGGCGCGCCCGGGGCGCCCGACGCGCCCGACCGCTCCGACCGCTCCGACTCCGACGAGCCCACCGCGCCGCCCGCCAGCGACCCGCCGACGCCCCGACGCCTCTCCCTCCGCAACGGCGCCCCCCCTCCCAGCGACGAAGATGAAGAAGACTACAAAAGGGTAGAACAGAACCCTGAGGACCGAGCCTTCCTGCAGCAGCTCAAGATGTTCCACCGGTCGCGCAGCGAGCCCTTCAAGAGTGGACACACTCTGAAGCATTTGTCCCTGCGCGCGCTGTACATGTCGGTGGCATCACGAGGAGGCTACGAGGCGGTCTGCCGCCACCAGCTGTGGCGCGCCCTCAGTGCTGACCAGCCCGCCAGGACCAGGAGACACTACGAGAGATTTCTCCTCCCCTTCGAGAACCACGAGCGACGCAACGGCTCCTCCTTCAAGCTAAACGGCAAGATGGACGGCGAGCCGCGCACCATCGCCACCATCGACGTGACCGACTCCCCGCGCCGCGACGACGACAAAGTGCTGCGCACCCCCTCCCCCCCGCCGCGCTGCGCCCGCGCCGAGCCCGACGTCGACTGCGAGACGGGGGAGGTCACCACCAAAGATGACGTTATAGTCAAAAACGCTGAGGAGTTGAACAGGGAGTTCCTAGATTCCTTGCCTAAAGAggaaaaacctgtcaaaatatCTGTCAAACCGGTTGAGAAGTTGATTGAGCCCGCCAAGTTTGAGGGCAGTTTGGAGGGCGTCCAGTCGGAGGGAACGAAGGAGGAAATCAGGGATTTTAGTCAGAACTACTTGAGTGATATGCAGAAATTTAGCTTGGGAGGCGAGTCGTTCTCGCCGCGCTCGACGCCGCTCAACGGGcacgccgcgcccgcgcccgccgaCCTTAAGTCGTCCCGGCCGGCGGGGCGCAGCTCGCTGCGCGCGGTGCGCGTGAAGCCGGCGCGCCCGCACGCGCTGCGGGCTGCTGCCGGCACAACGCCGCACCCGCTGCGGCCGTCGTCCGTGTCGTCGCCGGCGCTGGGGGGCGCGCCGCCCCCCGCGCCGCACTCGGCCCCGCCCGCCAACAACTTCGGCATCCACCGCCCCCCGCCACCAGGAGACGATGACATCGTGGAGGTCCCCTACAAACCAAAAACCCCAGAAATCATCGACTTGGACGAGTACCCGGAGAGCCCTCAGGCGGTAAAGAAAAAGAAGCTCGACATCCTGAAGCAGCGCGGCCTGGAGGTGACCGCTCTACCGCCCCCCTGGCCCGCCCCTCTCGCCGCCGCCCCCctcgccgcgccgccgcccctCATGCTCAACCCCGCGCTGCAGCACCAGATCATGACGCAGGCACAGCTCTTCCAGATGTACAACATCATCCCGCAGAGCTACGCGAACGGCGTCCAGCCGCCTAAAGTCATTCAGGCGTCTTCTATCTTCGGTTCTTCGGGGCCGGAGAAGACAGTGTACGGCAATCCTAAGGACCCATTCATGCCTCCTCCCCACGTGCTGCACGGTGCGCCGCTGAAGCCTCTGAAGTCTGCGCCCCCTCCGCCGCTTCCTCAAGACATCCTCGATCTCACATGCAAGTCCTCCAGCCCACCTCCGCAGAAACCCGCCGTCGAGATAGTCAGAgtgcctccctctccctccccTACAGCACAGAACCTAACAAAGAACTACACTCTAGTCGACGGGAAAGCGGTTGTCGGCTCGAATTTAGAAATAACTTTAGTCAATAAAGCTGCAAGTCCTGGCAAGAACCGGCCTCCGCAGAAGAGATCCAGCAACGGCAAGTTCATGTCGGCGAAAACTCCGACCCCGCCTAAAGACTCCTACCCGAAGTACGCCTCGCCCAGCTCAGCACAGAAGAAACCACCCATCAACATCCCCAACTACCAGATCAGGGAAGATTCGTCGCCAACACAAAGCCAGGTCCTTCAAAACGCGATGAAGAACCAAAATCTAGCTCAAATAATGGATTTGCAGAAGAGCTCAGTTCCTATGAGCTCGTTCATGGATCCCTACGTGGCGTTGTACAGCAGCCTGGCGGGGCAGATGGACCAGAGGCAGCTGGCCATGTACCGGGACCTGATGACCAACCAGTTCCGCTACCCCGGCGGCCTGATGAATCTGGGCGTCGCCACTCCCACAACGAAGAATTAG
- Protein Sequence
- MDEVLAINDKVVLRADDLLSWMCVGTEWRWGLRAVWRGACAPPADLPRHAPLTHTKLDFSDVDTEKSSIVVDEEAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTNNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAASPGLAAPRGAPGAPDAPDRSDRSDSDEPTAPPASDPPTPRRLSLRNGAPPPSDEDEEDYKRVEQNPEDRAFLQQLKMFHRSRSEPFKSGHTLKHLSLRALYMSVASRGGYEAVCRHQLWRALSADQPARTRRHYERFLLPFENHERRNGSSFKLNGKMDGEPRTIATIDVTDSPRRDDDKVLRTPSPPPRCARAEPDVDCETGEVTTKDDVIVKNAEELNREFLDSLPKEEKPVKISVKPVEKLIEPAKFEGSLEGVQSEGTKEEIRDFSQNYLSDMQKFSLGGESFSPRSTPLNGHAAPAPADLKSSRPAGRSSLRAVRVKPARPHALRAAAGTTPHPLRPSSVSSPALGGAPPPAPHSAPPANNFGIHRPPPPGDDDIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKQRGLEVTALPPPWPAPLAAAPLAAPPPLMLNPALQHQIMTQAQLFQMYNIIPQSYANGVQPPKVIQASSIFGSSGPEKTVYGNPKDPFMPPPHVLHGAPLKPLKSAPPPPLPQDILDLTCKSSSPPPQKPAVEIVRVPPSPSPTAQNLTKNYTLVDGKAVVGSNLEITLVNKAASPGKNRPPQKRSSNGKFMSAKTPTPPKDSYPKYASPSSAQKKPPINIPNYQIREDSSPTQSQVLQNAMKNQNLAQIMDLQKSSVPMSSFMDPYVALYSSLAGQMDQRQLAMYRDLMTNQFRYPGGLMNLGVATPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01027084;
- 90% Identity
- iTF_01025759;
- 80% Identity
- -