Mlon028163.1
Basic Information
- Insect
- Mystacides longicornis
- Gene Symbol
- sip1
- Assembly
- GCA_963576905.1
- Location
- OY756432.1:21466591-21478919[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-52 6.4e-48 165.0 4.9 5 275 360 614 356 614 0.95 2 2 0.53 1.2e+04 -3.1 0.0 197 211 627 641 616 657 0.54
Sequence Information
- Coding Sequence
- ATGTCAGAAGACGAAGTAGAGCGGTTCGAGATTTCTGATTTCGAtctgaaaaatgaatttaatattaaaagatCCCGTAAACCCACAAAGGAACAGCAGATTTATGGTATGTGGGCAGATGAttcggaagaagaagaaaaagtggaCAGAAAATCTAAGAAGAAATCAAAAGACTATTCCATTCCAATTGGGTTTGTTTCTGGAGGTGTGCAGCAGTCAGGAAAGAAAGAGGCTGAGCGTGaaaaaccagAGGACGATGAAGATGTAGCAGTGGATGTACCTGGGAGTTCATCAGAGGATGAAAAACCAAAGTTTGATGAAAATGATTTGGCTGGAATACGGAGGCGACCAGTGAAGAGTATGGCCGGAGGAGTAACGGAGTTGAATAAGGGTGGTGTGGGCCATTGGGAGAAACACACTAAAGGAATTGGAGCCAAACTTCTTCTGCAGATGGGCTACCAACCAGGTAAAGGATTGGGCAAATCTCTGCAAGGAATATCAGCACCAGTGACAGCAACTTTAAGGAAGGGCAGAGGAGCAATTGGTGCTTATGGTCCTgagGTTAAATCAAAACCAGATGTCAAGGAACCTGAAAAAACAGAAGAGAAATCCCACAAGTGGAAAAAAGCAGAAAAACAAAGATACTTTTATAGGGACGCTGAAGATGTTATACAGGAGGGACGACCTGCCTTGTCAGCTCATACACAACAAACCGCTGCTTTGGCTAGAGTTCCAGTGATAGATATGAGAGGTCCCGAGAAAAGAGTGTTGAGCGGATACCATGCCCTCAGGGCTGCAGCTCCTCGCTACGAGGATGTTCCCAGAAAAGATTGTCCCAACTTGGCTATGCCAGAATTACTGCACAATCTAAATCTTTTGGTTAACATCTGTGAACAGGACATCATAGAGTGCGCTCGTGAAAAACAAATGGCAGAGGATAGATTTGTGGCTCTGGAGAGAGATTTAGGTGTTTTACAAGAGTCATTAGAAAAGAGTGACGAAGAAATAGCAACTATGGAATACATTCTCTTTGAAATAGAAAGATTAAGCAGTCAGGAAATGTCCTTGGATATTGCTTACGATGTGTTTTCTAAGTTACAGAATAAATATCCATCAGAATATTCTTGTTTGGGTATTGGAGGTAGTGTAGTTGCTGGAGCCGCACTTGGAGGTCTGCTGGGATCAGCTCTTGCTTCTTGGCGTCCTTTGAAAGAACCTTCAGCTCCGTATGCTGTTTTAACCAAATGGGCTCCTCTTCTTTCAGCTCAAGCATTGCAAGAGCTATTCTGGCAACCATGGTTGGAGCAACTTTCAATTGCTGTGTTGGAATGGGATGTGCGGGATCCAACACCCTATTTAACAATCATAGATGTCTGGTGGAGCAGTGTCCCAGAGAGAGAAGCTTTGATGTTGCTCAGATCTACTGTCATTCCACGGTTAGCAGCTGCTGTACATAATTGGGATCCTACCAGAGACACAATCCCGCTGCATCATTGGCTGTTACCTTGGCATAGAATAGCAAGTGACTTGTTAGAAGAAATGGTATACCCTAATGTGAGATCAAGATTAGGCCAGGCTTTGAGTGGTTGGCATCCTATGGATGGGTCTGCGCTGGCATTGCTAAGGCCGTGGAGTGCAGCCTGGGCCTCTGCCTTACCAGTTTTCACCGCTATGCACATTGTGCCCAAATTAGAAGTTGCTATGAGGTCAATTCCAGTGGAGCCAGATGCCAACCCCACAGagAGCTGGTCCTGGTGTTCGAGTTGGCAAGAAATCATTGGCACCCAGGCGTTAGCAGGAGCTGCTGGAAGAACCCTCTTACCCAAGTGGCTTTCAGCATTGGCCTCGTGGCTTAACTGCAGACCCCCACATTCCCATGTCATACAGCACTACACAATGTGGAAGAGTCTCTTTTCTGAAGAGCTTCACAAGGAGTCTGAGTTTTCGGACACATTTAGGAAGGCATTGGATATGATGAACAGATCAATGGATAATCCTGTACCGATTCCTGCCCCTCCTTCTGCCCCAAGAATCAGTGCGTCGGCAATAGCTGAAGTGATGGCCAGTAACAATCAGCAGCTTAGTTTTAGTGAATTACTCGAAGTGAAGTGCACGGAAAAGGGAATCCCGCTGATCCCCATGGTGGGCAGGACTCGAGAGGGCCGACCTCTCTACCGGTTTGGTTCTCAATTTCAGTGTTACGTTATAAGGAATGTGATTATGTATTCTAAAGATCTCGGAAGAACTTTCCAACCTGTTTCTCTAGATGGATTATTACAGTTAGCAAACTAA
- Protein Sequence
- MSEDEVERFEISDFDLKNEFNIKRSRKPTKEQQIYGMWADDSEEEEKVDRKSKKKSKDYSIPIGFVSGGVQQSGKKEAEREKPEDDEDVAVDVPGSSSEDEKPKFDENDLAGIRRRPVKSMAGGVTELNKGGVGHWEKHTKGIGAKLLLQMGYQPGKGLGKSLQGISAPVTATLRKGRGAIGAYGPEVKSKPDVKEPEKTEEKSHKWKKAEKQRYFYRDAEDVIQEGRPALSAHTQQTAALARVPVIDMRGPEKRVLSGYHALRAAAPRYEDVPRKDCPNLAMPELLHNLNLLVNICEQDIIECAREKQMAEDRFVALERDLGVLQESLEKSDEEIATMEYILFEIERLSSQEMSLDIAYDVFSKLQNKYPSEYSCLGIGGSVVAGAALGGLLGSALASWRPLKEPSAPYAVLTKWAPLLSAQALQELFWQPWLEQLSIAVLEWDVRDPTPYLTIIDVWWSSVPEREALMLLRSTVIPRLAAAVHNWDPTRDTIPLHHWLLPWHRIASDLLEEMVYPNVRSRLGQALSGWHPMDGSALALLRPWSAAWASALPVFTAMHIVPKLEVAMRSIPVEPDANPTESWSWCSSWQEIIGTQALAGAAGRTLLPKWLSALASWLNCRPPHSHVIQHYTMWKSLFSEELHKESEFSDTFRKALDMMNRSMDNPVPIPAPPSAPRISASAIAEVMASNNQQLSFSELLEVKCTEKGIPLIPMVGRTREGRPLYRFGSQFQCYVIRNVIMYSKDLGRTFQPVSLDGLLQLAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00299061;
- 90% Identity
- -
- 80% Identity
- -