Basic Information

Insect: Mystacides longicornis
Gene Symbol: -
Assembly: GCA_963576905.1
Location: OY756439.1:24252308-24254223[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.3e-07 0.00012 22.9 0.0 1 40 17 57 17 60 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.3e-07	0.00012	22.9	0.0	1	40	17	57	17	60	0.88

Sequence Information

Coding Sequence: ATGCCTAGGAAGTATGTGAGAAAAGGAAATTCTGGCAGAGGGGAATGGTCAGAAGACAACTTAAGATGTGCGGTAGAGCTAGTGACCTCGGGAAAAATTTCGAAACGAGAGGCCGAACGTCTGTACAAAGTCCCAGCTAGAACCATTTCAAGGCGAATATTGACAGGAAAAATCACGAAACCTTGTCTTGGACCACAAGCATCTCTTGGTGTGGAAAATGAAAGACGACTTGCGCAATACATTAAACGACTTGGTGCTGCTGGATTTGCACCAAATAGAGAAACAGTTCGATCACTGGCCTATGATTTTGCAGAAAATCTGGGAATACCACATCGGTTTTCgaaggaaaacaaaaaagcTGGCTATCATTGGTTGACTTCGTTTTTGGAACGTAATAAAGATATTTCCATCAGGCAAGCTGAGGGACTTTCTGTGGCGAGGGCACAGGGAATGAACAGAAAGGAGgtagaagatttttttaatattttggagaaACAAATGATTGAAAATAACTTGGTTGATAAAggagaaaatatatttaatatggaCGAAACTGGAATCCAACTAATAAATAAACCTGGCCGCGTACTGGCTGCAAAAGGATCTAAGGACGTCCATGTCCTAACACCAAAAGAAAAAGGCGAGACAGTCTCCCTGATTGCCTGCTGTAATGCTGCAGGATATTTCTTACCACCTGTTGTAATAATGAAAGGGGTCAACAGGAAATCTGAATTTTCTGATGGACTTCCACCTGGATCAGAGGtgtatatgaacaaaaaatctGCCTACATAACCACAGAACTTTTTATAAAGTGGTTTAAGGAACATTTCTTGCCTCGTAAAGCACCAACTGGAAAATCTATATTAATTCTAGACGGGCACTCTTCACATTCAAATTCTATAGAACTCCTAGACCTTGCTCGTGATAATGCTGTTATCATTATATGCTTACCAAGTCATACAACTCAGGCCCTACAACCATTAGATAGAAGTTTTTTTAGGTCcctcaaaatatatttcaacgCAGAAGCCAATTCTTGGATGTTAAGAAATAAGTCCAGAACATTAACTAGATATCAAGTTGGTGATCTAATAGGTCGAGCATGGGGAAAGGCTGCCACAAACGGTAATGCTTTGTCTGGTTTTACAGCCTGTGGAATTTATCCACTAAACCCCAATGCCATTCCtgatcatttttttacaatatcggAAAATACAGATATTGAGCCAATAGCATCAACACCGTCCACTCAATTAATAGCACCAGCACCGTCCACTCAGTCAACACCAACACAATCAGAGCCATTGTTATCTGACTTGCCTACAACTTCTGCAACATCCCAAAAAGAAACACCCACCAAAGTTCTGGAAGCAATAAGTCCAATACCTAAACTAccaatttcaaaagtcaaaagAAAACAGGTGGCCAAAGTGCTAACCTCGGACGAAAACATTGCGTTCAAGAAAACCAATAAGCCCGAATTAATTAAATCATCCAAAACAAAAAaggcagaaaaaaataaaaagaaacccACTTCTTCCGGGCCAATTGCCGATGAAAGCAACCGTTGCTCGGAGTGTTgggaaaattattttctaacaaCAAATAAGTGTGATTGGATCCAATGCCAAGAGTGTCACAAATGGCTACATGAAAGCTGCACGGTGTACACCACTATGTGCAATGAGTGTGGTCGCGAAAAAATTAGAATAAGGAATATAAATATTGCTAAATAA
Protein Sequence: MPRKYVRKGNSGRGEWSEDNLRCAVELVTSGKISKREAERLYKVPARTISRRILTGKITKPCLGPQASLGVENERRLAQYIKRLGAAGFAPNRETVRSLAYDFAENLGIPHRFSKENKKAGYHWLTSFLERNKDISIRQAEGLSVARAQGMNRKEVEDFFNILEKQMIENNLVDKGENIFNMDETGIQLINKPGRVLAAKGSKDVHVLTPKEKGETVSLIACCNAAGYFLPPVVIMKGVNRKSEFSDGLPPGSEVYMNKKSAYITTELFIKWFKEHFLPRKAPTGKSILILDGHSSHSNSIELLDLARDNAVIIICLPSHTTQALQPLDRSFFRSLKIYFNAEANSWMLRNKSRTLTRYQVGDLIGRAWGKAATNGNALSGFTACGIYPLNPNAIPDHFFTISENTDIEPIASTPSTQLIAPAPSTQSTPTQSEPLLSDLPTTSATSQKETPTKVLEAISPIPKLPISKVKRKQVAKVLTSDENIAFKKTNKPELIKSSKTKKAEKNKKKPTSSGPIADESNRCSECWENYFLTTNKCDWIQCQECHKWLHESCTVYTTMCNECGREKIRIRNINIAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01024849; iTF_01024851; iTF_01024852; iTF_01024853; iTF_00179254; iTF_01024854; iTF_01024855; iTF_00179256; iTF_01024856; iTF_01024857; iTF_01024858; iTF_01024859; iTF_01024860; iTF_01024861; iTF_01024862; iTF_01024863; iTF_01024864; iTF_01024850; iTF_00179253;
90% Identity: iTF_00179253;
80% Identity: iTF_01024849; iTF_01024851; iTF_01024852; iTF_01024853; iTF_01024854; iTF_01024855; iTF_01024856; iTF_01024857; iTF_01024858; iTF_01024859; iTF_01024860; iTF_01024861; iTF_01024862; iTF_01024863; iTF_01024864;