Basic Information

Insect: Mystacides longicornis
Gene Symbol: -
Assembly: GCA_963576905.1
Location: OY756432.1:7387636-7389462[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.5e-08 5.7e-06 27.2 0.0 1 39 15 53 15 59 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.5e-08	5.7e-06	27.2	0.0	1	39	15	53	15	59	0.90

Sequence Information

Coding Sequence: ATGGTattcaaatataaaagaaaaactgcGAGAGCATCGTGGTCAGAAGAATCGCTAGAGCGAGCTATAAAATTGGTTAAAGAAGAAGGAAAATCTATAAATTCTGCCGCAAAAGAATTAGGAATTCCTTTTACTACTTTACATCGACACCTAAAATCAGGAAGTGTCTCGAAAAAATTGGGCAGATATATACCTGTTTTCACGCCAGAACAAGAGGAAGATCTGtgtgcatatttaaaaaaattagacAGTCTTTTCTTTGGATTGACTCGTTCAGAATTTTTAGGTCTAGTGTTTGAGTATgccagaaaaaataatattactcaTCCGTTTAAAAATGGCAAAGCTGGTGATGATTGGTTTGCTGGGTTTAAGCGCCGACACCCAGAAATTGTCCTACGAGCACCCGAACCGACATCATTGGCAAGAACTCGAGGTTTCAACAGGCCTCAGGtggaattattttataaaaatttttggGACTTAgtagaaaaatacaaatttgatgCGACTACAATTTATAACATGGACGAAACAGGTGTTAAGAGCAGCACGAGTCGACCGCCAAAAGTTTTATCGATAAAAGGTAAAAGGCAAGTTGGAGTAGTCAGCAGTGCCGAAAGAGGTCAACTTACCACTGTTATTTGCTGCTGTAATGCAGCTGGCACGTATGTTCCaccttttttcatatttgccCGAAAAAGAATGCAAGAGAGGCTATTGGATGGCGCTCCTCCGGGCTCGCAAGCTACAGTCAGTGACAATGGTTGGGTAAACGGAGAAGCTTTTTTAAACTGGCTTAAATTTTTCGCTGATACAGTCCGTCCAAACGAAAACAGGAAGATACTACTACTGCTCGACAATCATGAGTCCCACAAATATTATCCAGCTTTGGAATTCGCatcgaaaaataatattatatttttatcttttgcaCCCCACACCACGGATCGTATGCAACCACTGGATGTTGCCGTGTATGGACcgctgaaaaaatattttgagcaAGAGATAAATACATTTCAAAAATCACACCCAGGACGAATTGTGAACCAATATGACATGGCTAAATTGTTCGGAGGAGCATACGTCAAAAGCGCTTCAGTCCAGAATGCAGTAAATGGATTTAAGAAACCAGGAATATGGCCGTACGATCCGAACGTTTTTGGAGATGAAGATTACGCTCCTTCAACAATGACTGATCGTCCTCTGAATGAAGCTCAAAGCTCTTTGGATGATACTCCATGCAACTCAGCATCATCTGTTGTACCCCACTCTCCCACAGACCTTGTATCAACACAGAATTTGATGACGGATCTTTCTGCAAAGGAAAACCCCGAACAATGTACAACACCTATACCTGATCCAATCCTGGAACAAGGACCGTTGCAAGCTCCTGTAGCAAATCTTACACCATTACAGATCAGACCCATACCAACAATGGCTGCTCCCAAAACAAATCGCAAAAATAAGAGACAAAAATCGGAGATATTAACATCAACTCCAGTTAAAGCTGAGCAAGCtgctaaatatataaaagtaaataaaaagaagacCAATATATCTGAATTAGCAAGTTCCAGCAAAATTAAGAAGAATAAGATAAAGAAGACTGAATTACCAGGTCACAGCCAAACTAAAAGGACAAAGACATCTTCCAAAGCTAAAACTAAAgctgatttattttgtttggtgTGTGCCGAGAAATATACTGAACCGCTTGTTGAAGATTGGATTCAGTGTAGCCAGTGCCAAAATTGGGCACACGAAAATTGTACATCATACGCAGGTGTTGGAAGTTATTTCTGCGATGAATGCGAAGactga
Protein Sequence: MVFKYKRKTARASWSEESLERAIKLVKEEGKSINSAAKELGIPFTTLHRHLKSGSVSKKLGRYIPVFTPEQEEDLCAYLKKLDSLFFGLTRSEFLGLVFEYARKNNITHPFKNGKAGDDWFAGFKRRHPEIVLRAPEPTSLARTRGFNRPQVELFYKNFWDLVEKYKFDATTIYNMDETGVKSSTSRPPKVLSIKGKRQVGVVSSAERGQLTTVICCCNAAGTYVPPFFIFARKRMQERLLDGAPPGSQATVSDNGWVNGEAFLNWLKFFADTVRPNENRKILLLLDNHESHKYYPALEFASKNNIIFLSFAPHTTDRMQPLDVAVYGPLKKYFEQEINTFQKSHPGRIVNQYDMAKLFGGAYVKSASVQNAVNGFKKPGIWPYDPNVFGDEDYAPSTMTDRPLNEAQSSLDDTPCNSASSVVPHSPTDLVSTQNLMTDLSAKENPEQCTTPIPDPILEQGPLQAPVANLTPLQIRPIPTMAAPKTNRKNKRQKSEILTSTPVKAEQAAKYIKVNKKKTNISELASSSKIKKNKIKKTELPGHSQTKRTKTSSKAKTKADLFCLVCAEKYTEPLVEDWIQCSQCQNWAHENCTSYAGVGSYFCDECED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01209157;
90% Identity: iTF_01340044;
80% Identity: iTF_01024833;