Basic Information

Insect: Mystacides longicornis
Gene Symbol: -
Assembly: GCA_963576905.1
Location: OY756439.1:22737215-22739068[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.6e-10 1.7e-07 32.1 0.0 1 36 18 53 18 60 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.6e-10	1.7e-07	32.1	0.0	1	36	18	53	18	60	0.91

Sequence Information

Coding Sequence: atgtttgtttttagaATGTCCGATTCGCAATCAACCAAACGAAAAACCTGGGATGAAGAAAAAATGGCACAAGCTATAAAAATCGTCCGGGAAAAGAAAATGGGGTATTTGAAAGCGGCACAGCATTTTCAAGTGCCTAGGACAACTTTATTTCGTATCTGCCAAAAAGATGAACAGTCTCCAGAAGTGGCAGCAGCTACTACATTAGGACGAAAAACTATCTTGGGCTCCGAACTTGAACGTCAGCTTGTAGAATACATACTAATAATGGAGAGCAAGTTTCACGGTTTAACAAGAACTGATCTTCGCCGTATGGCGTTCATGCTAGCAAAGCGAAACAATTTGCAGAATCCCTTCGGTGAATCTGGTATGGCTGGAAAAAAGTGgttgaagttatttttaaatcgtCATAAAGATAAACTTTCGATAAGAAGACCAACTGGTACATCATTTGCCAGAGCATTTGGATTTGATAAAGAAAAAGTGGAAGCCTTTTTCAACCTCCTTGAAGAGCTTTACACTAAAAATAACTATCCACCAAAAGGTATTTACAACGTGGATGAATCAGGCCTCACAATAGTACAAAGTAAGATACCACAAATAATCGGCCACAAAGGTAAACGCCAGGTAGCTGCACTGACTTCAGCAGAAAGAGGATCTCTGATGACAATAGTTGTTTGCATGAATGCTACTGGTCATTTTGTGCCACCATTCATTATTTTTCCCAGAAAAAATATGAGTGCTCAGCTAATGAGAGGCTGTCCTCCAGGATCAGTCGGAGTTGCGCATCCATCAGGGTGGATACAAATGAACATCTTTACAGACTGGTTCAAGCACTTTATTCAACACACCAACCCGACTCCTGAATCGAGGGTTTTACTGATACTAGATGGACACTATAGTCATACTCACAATATCGATATAATAGATATTGCTAGGGAAAATAACGTGGACATAGTTTCGTTACCTCCTCATACGACTCATAAATTGCAGCCGTTAGATAAGACTTTCATGGGGCCTTTAAAAACATACTATAGTGAGGAAATACGCATGTGGATTAGAGACAACAACAGACCTCTAAGTCCATATGATATTGTGGAGCTGTTTGGCAAATCCTATTTGAAAGTACAAACAGGCGAAATTGCAGCCAACGGGTTCAAAGTCACTGGATTGTGgcctttaaataaaaatgtcttcaGTGATGTGGACTTTATTGCTGCGCAACAAAATGCTGTAATAGATGGTTGTACAACCAATATCCCTCCGCTGGAATCAAGATCTGAAACTGGTCAAGTTCTGGTAGAAATACGTGCACCACAAACAACTGCTAATTTACAACCTGAACCTGCACCTTCGACTTCTGGGCTTAATCGCAGCAGTTTGGGTCTGGTGTCTCCGCATGCCATAAGTCCAGTGCCAGAGAAACGAAGAAAAGTATCTAGCAGAGGAAGAAAAGCTGCTGTAGCAGCAGTCATAACATCTTCTCCCtacaaaaatgatttagaaaataaaaatatgaagagacAAGAAAAAGAAAGTAAACTAGTCAAGAcaaagaataagaagaaaacTGCGAAGAGAAACAAACAAACGAAGAAAAATAAGGATGATAGTGAAGAAGAAGACTCTGAGGAACTAGACGTTATCCAGTTTGATGAAGGTAGTGAACATGATGAGTTGATGGACCAAGTACCTCCTGACTCTGCTGATGCAGAATGTATGTTCTGTTCAAGACTTTTTTCCATGGATAAAAGTGGAGAAAGCTGGATTAAATGCTTGATGTGTGGGCTCTGGGCACATTATGATTGTGCTGGTCCAGAGTTTGAAACTTGGATCTGTGACTTTTGCAAGTAA
Protein Sequence: MFVFRMSDSQSTKRKTWDEEKMAQAIKIVREKKMGYLKAAQHFQVPRTTLFRICQKDEQSPEVAAATTLGRKTILGSELERQLVEYILIMESKFHGLTRTDLRRMAFMLAKRNNLQNPFGESGMAGKKWLKLFLNRHKDKLSIRRPTGTSFARAFGFDKEKVEAFFNLLEELYTKNNYPPKGIYNVDESGLTIVQSKIPQIIGHKGKRQVAALTSAERGSLMTIVVCMNATGHFVPPFIIFPRKNMSAQLMRGCPPGSVGVAHPSGWIQMNIFTDWFKHFIQHTNPTPESRVLLILDGHYSHTHNIDIIDIARENNVDIVSLPPHTTHKLQPLDKTFMGPLKTYYSEEIRMWIRDNNRPLSPYDIVELFGKSYLKVQTGEIAANGFKVTGLWPLNKNVFSDVDFIAAQQNAVIDGCTTNIPPLESRSETGQVLVEIRAPQTTANLQPEPAPSTSGLNRSSLGLVSPHAISPVPEKRRKVSSRGRKAAVAAVITSSPYKNDLENKNMKRQEKESKLVKTKNKKKTAKRNKQTKKNKDDSEEEDSEELDVIQFDEGSEHDELMDQVPPDSADAECMFCSRLFSMDKSGESWIKCLMCGLWAHYDCAGPEFETWICDFCK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121345; iTF_01031073; iTF_00121346; iTF_01031074; iTF_00121347; iTF_01031075; iTF_00121348; iTF_01031076; iTF_01031077; iTF_01031078; iTF_01525894; iTF_00822919; iTF_01525896; iTF_00928617; iTF_01203977; iTF_01525897; iTF_00928618; iTF_01525898; iTF_00928619; iTF_01525899; iTF_01525900; iTF_00212365; iTF_01525901; iTF_01525902; iTF_01029200; iTF_00212370; iTF_01024788; iTF_00212373; iTF_00179191; iTF_00423735; iTF_00179192; iTF_01361529; iTF_00745594; iTF_01031070; iTF_00121343; iTF_00423711; iTF_01031071; iTF_00121344; iTF_01031072; iTF_01443776; iTF_00682313; iTF_01525935; iTF_00121342; iTF_01317219; iTF_00423720; iTF_00423715; iTF_00161489; iTF_00161488; iTF_00162515; iTF_00161487; iTF_00321531;
90% Identity: iTF_00121345; iTF_01031073; iTF_00121346; iTF_01031074; iTF_00121347; iTF_01031075; iTF_00121348; iTF_01031076; iTF_01031077; iTF_01031078; iTF_01525894; iTF_01525896; iTF_00928617; iTF_01203977; iTF_01525897; iTF_00928618; iTF_01525898; iTF_00928619; iTF_01525899; iTF_01525900; iTF_01525901; iTF_01525902; iTF_01029200; iTF_01024788; iTF_00179191; iTF_00423735; iTF_00179192; iTF_01361529; iTF_00745594; iTF_01031070; iTF_00121343; iTF_00423711; iTF_01031071; iTF_00121344; iTF_01031072; iTF_01443776; iTF_00423715; iTF_00822919; iTF_00682313; iTF_00121342;
80% Identity: -