Mlon020195.1
Basic Information
- Insect
- Mystacides longicornis
- Gene Symbol
- bab1
- Assembly
- GCA_963576905.1
- Location
- OY756428.1:22500871-22502574[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-12 5.5e-10 40.0 0.0 1 45 312 356 312 356 0.96
Sequence Information
- Coding Sequence
- ATGGGGAGCAGCGAGGGTCAGACTTATTGCCTTCGGTGGAACAACCACAAAACAAATCTGGTGGAGATCCTGGACATCCTCATAAAAATGGAGTATTATGTGGACTGCACAATAGTGGTGGATGATCATGTACAGTTCAAGGCGCACAGGGTCATACTGGCAGCCAACTCACCTTACTTCCAAACCATCCTCATGGACGTCCCAATGGATCATTGCAGTATATTGTTCCCGGGTGTCAAGGAATTTGAAATGAGAGCTCTCCTGGAATATATGTACACCGGGGAAGTCAATGTCACACAATCACAGATTCCGAGAATCATGAAAATAGCCGAACAGTTGGAAGTCAAAGGATTGTTCGACATGACAGAGCTCCGACAGAAATTTAAGGATGATAGTGAAGGCATGAGGACTCCTCCCTGTGCTGTGACGCCTGCCCCAGCTCACTCCAGCAGTTCCCCTCCCACTCTTCCTAGCAGCTGGCCACCTCTACCCCCACCACCCTCCCTCAGTGCCTCTTATGAAGCAGCGTCAGATATGAACccattgaaaagaaaaaagttatcTAGTATTAACAGTATGCTTCTATCACGTGACACTCCAATATTGAGGAATGTCTTAGCACAGAGCAGTGTGGCAGACTCGTCACAGCCTCCACCACATAGTTTGCTTTGCCAACCAATTCCACCAACACCATCACCCCGAGGAGAAAGGCTGCATTCAAATGGATCCGCATATGATTCGTATAAGCACAACCGTAGTGAAATCTCCGAAGAAGCTCACTCACCGTACACAGACAAATCCATGGATGATGACAACATGAACCGCTCTCTTCATCCTTCATCCCCTCCACAGAATTTTGCCAGTGATTTGAGATGTGGCATCGCTCCATATGTTCCTCAGCAGAAACCAGAGTGGAAGCGTTACAAACAATACACTAGAACTGATATCATGTCGGCAATAGAATGTGTTAGGAATGGAATGAGTGCTCTGCAAGCTTCCAGGAAGTTCGGAGTACCTTCCAGAACTCTGTACGACAAAGTAAAAAAGTTGGGCATCACAACCAGCAGACCAATGAACAGAGGGATTAAACGAGAATCCAATGGAAGTCCAGGCGGACTGGGAGGCGGCTGGTTAGGAGGTGGGGGAAGAGAAGAGGAACCGCTGCATCCGGCTGCAGCATTGCTGGACGCAGGCTTCTTGCAACAAGCTTTAGAAGGTAGAGCTGATTTAGGGGGAAGAGAGGCATTACACGCAATGGCGCTAGCTGCAGCTGCACATGCTGCTGCGGCTGGTCTTAATCCACCCACCAGCCCTCCAAGAGCTCCTTCTCCGGGTGTACTTAAATACGTGAGACGAAATAGTCCGAGTCCTCCCCGTTCTGCACTACCAAATGGGGCTCACACAGAACCTTCAGATGACGAGGATCATGTTGAAGATCTTTCAGTGAGTCGTAAGTCTGATCCGGAACCGCCCGGAGTAATTGTAACTCCCATGAATCAAGTATCAGCCATCATGAAGAAGGAAGACATACTGAGGGAGTACAGAGATGACTCCAGACGAGGTTTGGTGGACTGTGGTGATAGAGATTAA
- Protein Sequence
- MGSSEGQTYCLRWNNHKTNLVEILDILIKMEYYVDCTIVVDDHVQFKAHRVILAANSPYFQTILMDVPMDHCSILFPGVKEFEMRALLEYMYTGEVNVTQSQIPRIMKIAEQLEVKGLFDMTELRQKFKDDSEGMRTPPCAVTPAPAHSSSSPPTLPSSWPPLPPPPSLSASYEAASDMNPLKRKKLSSINSMLLSRDTPILRNVLAQSSVADSSQPPPHSLLCQPIPPTPSPRGERLHSNGSAYDSYKHNRSEISEEAHSPYTDKSMDDDNMNRSLHPSSPPQNFASDLRCGIAPYVPQQKPEWKRYKQYTRTDIMSAIECVRNGMSALQASRKFGVPSRTLYDKVKKLGITTSRPMNRGIKRESNGSPGGLGGGWLGGGGREEEPLHPAAALLDAGFLQQALEGRADLGGREALHAMALAAAAHAAAAGLNPPTSPPRAPSPGVLKYVRRNSPSPPRSALPNGAHTEPSDDEDHVEDLSVSRKSDPEPPGVIVTPMNQVSAIMKKEDILREYRDDSRRGLVDCGDRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00897946;
- 90% Identity
- iTF_00179103;
- 80% Identity
- iTF_01025174;