Acin016533.1
Basic Information
- Insect
- Athripsodes cinereus
- Gene Symbol
- bab1
- Assembly
- GCA_947579605.1
- Location
- OX388310.1:24764073-24765808[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-12 6.3e-10 40.1 0.0 1 45 311 355 311 355 0.96
Sequence Information
- Coding Sequence
- ATGGGTAGCAGCGAAGGACAAACGTACTGCCTCCGGTGGAACAACCACAAAACAAACCTGGTGGAGATATTGGACATCCTCATAAAAATGGAATATTATGTTGACTGTACCATTGTCGTGGACGACCATGTGCAGTTCAAAGCACACAGAGTCATCTTGGCAGCCAACTCCCCATATTTCCAGACTATCCTTATGGATGTCCCAATGGATCACTGCAGTATTCTGTTCCCTGGAGTGAAAGAATTCGAAATGAGAGCATTACTGGAATACATGTACACTGGAGAAGTGAATGTAACCCAGTCACAAATCCCTCGTATAATGAAGATAGCTGAACAACTTGAAGTTAAAGGATTGTTTGATATGACGGAGTTGAGACAAAGATTTAAGGAAGAGAGTGAGGGTATGCGGACTCCACCGTGTGCCGTAACTCCCGCTCTTGCACATTCGAGTTGTTCCCCACCCGCCCTTCCTGCCCATTGGCCGCCTTTACCGCCACCTCCGTCTCTCAGTGCGTCATACGAAGCCGCCTCCGATATGAACCCTTTAAAAAGAAAGAAGTTATCCAGTATTAATAGCATGCTCCTGTCTCGTGACACTCCTATCCTTCGCAATGTATTGGCTCAGAGTAGTGCGGCAGACTCATCGCAACCTCCTCCACACATGCTCTGTCAGCCTATACCACCCACTCCTCCACCAAGGGCAGAAAGACTACACTCCAATGGATCAGCTTACGATTCTTATAAGCACAATCGCAGCGAAATTTCCGAAGAGGCACACTCACCTTACACAGATAAATCAATGGATGATGACAGTATGAACCGCTCTCTTCACCCATCTTCACCTCCACAGAACTTCCCCAGTGATTTAAGGTGCGGGATAGCTCCCTATGTGCCTCAACAAAAACCTGAATGGAAACGATACAAGCAGTACACGAGGACCGACATTATGTCTGCTATTGAATGTGTTAGAAATGGAATGAGTGCTTTGCAGGCCTCCAGGAAGTTCGGAGTGCCTTCCAGAACGCTTTATGATAAAGTGAAAAAGTTGGGAATAACAACTAGTAGGCCAATGAATAGAGGAATCAAACGAGAATCTAATGGAAGCCCAGGTAGTCTGGGAGGCGGATGGCTGGGCGGTGGGGGAAGAGAAGAGGAGCCTTTACATCCAGCTGCAGCACTGCTAGATGCAGGCTTCCTTCAGCAGGCATTGGAAGGGAGGGCAGATCTGGGAGGAAGGGAGGCTCTACATGCTATGGCTTTAGCAGCCGCAGCTCATGCAGCAGCAGCGGGACTTGGACCAACCTCTAGTCCTCCACGTCCACCTTCTCCAGGAGTCCTAAAATATGGAAGACGTAACAGCCCCAGCCCTCCCCGTGCCAGTTTAGCGAACGGTGTCCATCCTGAGGAATCAGATGATGAAGATCGTGTAGAAGATTTATCTGTAAGTCGCAAGTCAGATTTAGAACCTCCTGGTGTAATTGTTCCTCCTATGAATCAAGTGTCCGCTATCATGAAGAAAGAAGATGCCTTGAGAGAGTATCGGGAAGATTCTAGGAGAGGTTTAGTGGACTGTGGTGATAGAGATTGA
- Protein Sequence
- MGSSEGQTYCLRWNNHKTNLVEILDILIKMEYYVDCTIVVDDHVQFKAHRVILAANSPYFQTILMDVPMDHCSILFPGVKEFEMRALLEYMYTGEVNVTQSQIPRIMKIAEQLEVKGLFDMTELRQRFKEESEGMRTPPCAVTPALAHSSCSPPALPAHWPPLPPPPSLSASYEAASDMNPLKRKKLSSINSMLLSRDTPILRNVLAQSSAADSSQPPPHMLCQPIPPTPPPRAERLHSNGSAYDSYKHNRSEISEEAHSPYTDKSMDDDSMNRSLHPSSPPQNFPSDLRCGIAPYVPQQKPEWKRYKQYTRTDIMSAIECVRNGMSALQASRKFGVPSRTLYDKVKKLGITTSRPMNRGIKRESNGSPGSLGGGWLGGGGREEEPLHPAAALLDAGFLQQALEGRADLGGREALHAMALAAAAHAAAAGLGPTSSPPRPPSPGVLKYGRRNSPSPPRASLANGVHPEESDDEDRVEDLSVSRKSDLEPPGVIVPPMNQVSAIMKKEDALREYREDSRRGLVDCGDRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00897946;
- 90% Identity
- iTF_00179564; iTF_01024774; iTF_00299249; iTF_01025174; iTF_00298971;
- 80% Identity
- iTF_00179564;