Mlon022446.1
Basic Information
- Insect
- Mystacides longicornis
- Gene Symbol
- bab1
- Assembly
- GCA_963576905.1
- Location
- OY756429.1:27771266-27780487[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-17 2.4e-14 54.0 0.0 1 43 75 118 75 120 0.95 2 2 8.1 3e+03 -0.7 0.3 6 15 203 212 194 213 0.82
Sequence Information
- Coding Sequence
- ATGATACGATACCAAATTGTTGATGCTAAATTTACACCAGTCGTGTTCGAATTGgcAAAACTGTTGGAAAACTCGCACGTATGGCTTGGCGCTTCTACATCTTCAATAGCAGtaGACAGCTACCAATACCAGTTGCAATCCATGTGGCAAAAATGTTGGAATACAAATCAGTCGTTGGTCCACAATCTGCGCTTTCGTGAACGCGGCCCATTGAAATCCTGGCGACCGGAGACGATGGCCGAGGCAATCTTTTCTGTACTAAAAGAAGGACTCTCACTCTCCCAAGCTGCTCGAAAATATGACATTCCATATCCGACATTTGTTCTATATGCAAATCGAGTACATAACATGCTTGGGCCCAGCACGGATGGTGGCGCAGAAGTACGCCCAAAGGGACGGGGAAGACCTCAACGCATTCTTCTTGGAGTGTGGCCTGATGACCATATCCGTGGAGTTATAAGAGCTGTTGTGTTCCGTGACTCCCAAGGTGGACATATCAAAGAAGAACCTATGACTGGTTATCCCGCTATTACGGATGGATTGTCAATGCCAAATTATCCTTGTGGCAATGGCACAGATGGAGGAATGTCACCCAACAGTGCGGCAGCCGCCGCAGTTGCCGCAGTGGCTCACGGCTTAAGAAGACAAATGTGCGGCATGCTGACTCCTCAACGGTCAACTATATCTCCTAGTCCATTAGCATCTCCATTGTGCTCTCCACCTCCGCCTGGATTAGCCCTAGAGCCTCCTGCTCTTCTACCACCTCCGCAGCCAAATGGCGCTGATAGATTCCGCCCTTTCGTTACGCCCCCACGTCCGGAAACATACTTTCGTGAAGACTTAGAAGAATTGGTGCGCAGCACATCTCAAACACCAAGATCTACAATTTCTCAAGAGGAATCTCTCACGGTTAAGGCAGAGCCCGTTCCAGAATCGCGTATCTAA
- Protein Sequence
- MIRYQIVDAKFTPVVFELAKLLENSHVWLGASTSSIAVDSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSTDGGAEVRPKGRGRPQRILLGVWPDDHIRGVIRAVVFRDSQGGHIKEEPMTGYPAITDGLSMPNYPCGNGTDGGMSPNSAAAAAVAAVAHGLRRQMCGMLTPQRSTISPSPLASPLCSPPPPGLALEPPALLPPPQPNGADRFRPFVTPPRPETYFREDLEELVRSTSQTPRSTISQEESLTVKAEPVPESRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00179070;
- 90% Identity
- -
- 80% Identity
- -