Acin037437.1
Basic Information
- Insect
- Athripsodes cinereus
- Gene Symbol
- bab1
- Assembly
- GCA_947579605.1
- Location
- OX388329.1:25379826-25385328[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-16 5.9e-14 52.9 0.0 1 43 28 71 28 73 0.95
Sequence Information
- Coding Sequence
- ATGTGGCAGAAATGTTGGAATACAAATCAATCACTCGTACATAATCTGCGCTTTCGTGAGCGTGGACCACTCAAATCTTGGCGGCCAGAGACTATGGCCGAAGCGATATTTTCCGTATTGAAAGAAGGACTCTCTCTCTCCCAGGCCGCACGCAAATTCGACATTCCATATCCGACATTCGTACTTTATGCTAATCGTGTCCATAACATGTTGGGTCCAAGTACGGACGGTGGTACAGAGTTGCGACCCAAAGGTCGTGGAAGACCACAACGTATACTTCTTGGTGTTTGGCCAGATGAACATATTCGTGGAGTAATCAGAGCTGTTGTATTCCGTGATTCTCACAGTGCTCATCATATAAAAGAAGAACCCTTACCACCTTATCCAGCTATTACAGACGGCTTGACATTACAAAACTATCCATGCGGTAACGGAACAGATGGAGGGCTCTCTCCAAATAGTGCAGCCGCCGCAGCAGTTGCCGCCGTCGCACACGGCCTAAGACGGCAAATGTGCGGTATGATGACACCCCAACGAGCAACACTATCACCTAGTCCATTAGCATCACCTCTATGCTCTCCACCACCTCCGGGTTTAGCTCTTGAACCACCGACACTTCTACCACCTCCTCAGTCGAATGGCGCTGATCGTTACCGCCCTTTTGTCACACCACCACGCCCAGAAACATTTTTCCGTGAAGATTTAGAAGAACTAGTACGGAACTCATCACAAACACCAAGATCAATGATTTCTCAAGACGAATCTCTATCTGTGAAGGCTGAGCCTATTGCAGAACCTCATATATAA
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSTDGGTELRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHSAHHIKEEPLPPYPAITDGLTLQNYPCGNGTDGGLSPNSAAAAAVAAVAHGLRRQMCGMMTPQRATLSPSPLASPLCSPPPPGLALEPPTLLPPPQSNGADRYRPFVTPPRPETFFREDLEELVRNSSQTPRSMISQDESLSVKAEPIAEPHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00298968; iTF_01024770; iTF_01012132;
- 90% Identity
- iTF_00298968;
- 80% Identity
- -