Basic Information

Insect: Myrrha octodecimguttata
Gene Symbol: ham
Assembly: GCA_958510865.1
Location: OY294062.1:32295592-32310088[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.091 15 7.5 0.3 2 23 46 68 45 68 0.92

2 9 0.00011 0.018 16.6 3.3 1 23 75 98 75 98 0.95

3 9 6.4e-09 1e-06 30.0 3.1 1 23 104 126 104 127 0.96

4 9 9.6e-07 0.00016 23.2 1.7 1 23 133 155 133 155 0.95

5 9 2.4e-05 0.004 18.8 5.0 1 23 161 183 161 183 0.99

6 9 0.0092 1.5 10.6 0.7 2 21 191 210 190 211 0.91

7 9 8.2e-09 1.3e-06 29.7 0.7 1 23 535 557 535 557 0.98

8 9 1.1e-06 0.00017 23.0 1.6 1 23 563 586 563 586 0.97

9 9 8.3e-06 0.0014 20.2 3.4 1 23 592 614 592 614 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.091	15	7.5	0.3	2	23	46	68	45	68	0.92
2	9	0.00011	0.018	16.6	3.3	1	23	75	98	75	98	0.95
3	9	6.4e-09	1e-06	30.0	3.1	1	23	104	126	104	127	0.96
4	9	9.6e-07	0.00016	23.2	1.7	1	23	133	155	133	155	0.95
5	9	2.4e-05	0.004	18.8	5.0	1	23	161	183	161	183	0.99
6	9	0.0092	1.5	10.6	0.7	2	21	191	210	190	211	0.91
7	9	8.2e-09	1.3e-06	29.7	0.7	1	23	535	557	535	557	0.98
8	9	1.1e-06	0.00017	23.0	1.6	1	23	563	586	563	586	0.97
9	9	8.3e-06	0.0014	20.2	3.4	1	23	592	614	592	614	0.99

Sequence Information

Coding Sequence: ATGAATGAAATTCCAACCCGGAGTGTTTTGGTGGGAAGAATGGCCATATGGCTGGACGCTGGCGTTGAAGATAGCAGAGAAGAATGTGGAACTGTTGATGATCGTGAAGAAGACGAGGAAGACGAGTCTGAAGTGAGGTGCTGTGTTTGTGAACAACCCTTTACGGATGTTGAtaaACTCGACGAACATCTTGTGGTGAAACACAACTACAGAAAGGAAGAATTCAAGTGTGAATACTGTCCAAAATCCTATAGCCATAGGCCGTGTCTGATCAAGCATAAAGCTGTTGTACATGGTGAACATCGAAAATATCACTGTGAAAACTGCCCTAAGGTTTTTACCGATCCCAGTAATTTGCAGAGGCATATAAGGACGCATCACGTAGGCGCCCGTTCTCACGCCTGTCCTGAATGCGGAAAAACTTTCGCCACGTCATCTGGATTGAAGCAACACACGCACATCCATTCCTCTGTTAAGCCCTTTCAGTGTGAAGTCTGTTTTAAGGCCTACACACAATTCTCCAACCTGTGCCGCCACAAGCGAATGCACGCCGACTGCCGCATGCAAATAAAGTGCATCAAGTGCGGACAATCATTTTCTACTGTAACCTCACTCTCAAAACATAAACGATTCTGTGATTCAAGCACTCCCGCATCCACTCTGGGAGCCCCGCCGCCTTTATCTTTGAACTCAATGGCTAGCAACAACCCCTTCTCGCTGTATAGGCCGACCTGTCACATGCCCTTCTTTCCACCGCATTTCCCTTCATATCACCAGATTTTCCACCCTTCTGGACCACCCTCGAGCTTCATGAACCCTCTTCTCTTCAACCAATTACCCAAGTTGAGAACGGAGGAGTTACCTGAAATGCCTTCACCTAAGAGAATCAGATCATCGAGTACGGAAAGGATTTCACCCTGCGTAGAACGTAGGACACCTCCAAGGGCTCCTGCGGTGAATCACAAGGTTAGTCCGCCAACTGCTGAAGAAGCGCACTTGGCACCATCACCTGCGAAACCAACAACTATCCCTGTAAAGGTGGAGAAGTCTGAAATACGCTCAAGCACACCGGAAACCAACAGCTATCCAACAGATCTGTCAAGAACTTCCGAAGAAAGAACACAAAAACGATCAAGTCCAACTACGAGTGAGGAAGGCGAGCAGCCCCTAGATCTCAGTATGACCTGGAAGAAGGCCAAAGTTGAACTCGTGGAAACCTCATCTCCATCTCCGAGATCAGAGAGAGCCAGTGAAATATCTACACCACCCAAACCAATCGAGGAGAAAATAGATGTCCTTACTGTAGACGAGGAAAAAAGATCTATGGAAAAACTGCAAGTGACACCTCCCATGGCTTATCCTCGACCAATTCACCCGATGCTCTTAGATATGTACCGACCCAGCTTTCCAAACTTCACATCTCCATCTAACAACGAAAGATTACTACCATCCCCATTTGGACCACACAGGTTTCCATTTTTGAACAATTTACAACCACAGAGAAACTTTGATCTCCTCAGACCTGGTCTGCAGAACTTTGGTGGTGTCAAGCCTTTCCACGACGTGATGCAACAACAGACTCAAGGAAAAATCAAGGATAGATACGCTTGCAAGTTTTGTGGAAAGGTTTTCCCAAGGTCAGCCAATTTGACCAGACATTTACGAACACATACTGGGGAGCAACCTTATAAATGTAGATACTGTGAGAGATCCTTCAGTATTTCCAGTAACTTACAGAGACATGTCAGGAATATCCATAACAAAGAAAAACCTTTCAAATGCCCTTTATGCGAAAGATGCTTCGGTCAACAAACTAACTTAGATAGACATCTGAAGAAACATGAGGCTGATGATGGTAGTGGAGGTGTTGTTGTTGCAGACTCTCCTGGTAGCAGTAATGAGAATGAAAGAGAAGATgcttatttcgatgaaattcgcagCTTCATGGGAAAAGTTACATACTCAGGTAATGAAAGTTACAACCAAACGAGGTTGTTTTCTCCACCATCTCATAATATTATAGATGTTGTGGGCAAGGATGAAGAAGATTCTGAGAGCTACTCAGATGGTACACCTCCTGATGAGTTTAGTGATCATAAAGCAGAAGATTACGAAATGAAAATCAAAACTGAaagagatgaaattttgaataataacgAACAGCCGATAGAACTGGCGACATAA
Protein Sequence: MNEIPTRSVLVGRMAIWLDAGVEDSREECGTVDDREEDEEDESEVRCCVCEQPFTDVDKLDEHLVVKHNYRKEEFKCEYCPKSYSHRPCLIKHKAVVHGEHRKYHCENCPKVFTDPSNLQRHIRTHHVGARSHACPECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIKCIKCGQSFSTVTSLSKHKRFCDSSTPASTLGAPPPLSLNSMASNNPFSLYRPTCHMPFFPPHFPSYHQIFHPSGPPSSFMNPLLFNQLPKLRTEELPEMPSPKRIRSSSTERISPCVERRTPPRAPAVNHKVSPPTAEEAHLAPSPAKPTTIPVKVEKSEIRSSTPETNSYPTDLSRTSEERTQKRSSPTTSEEGEQPLDLSMTWKKAKVELVETSSPSPRSERASEISTPPKPIEEKIDVLTVDEEKRSMEKLQVTPPMAYPRPIHPMLLDMYRPSFPNFTSPSNNERLLPSPFGPHRFPFLNNLQPQRNFDLLRPGLQNFGGVKPFHDVMQQQTQGKIKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCRYCERSFSISSNLQRHVRNIHNKEKPFKCPLCERCFGQQTNLDRHLKKHEADDGSGGVVVADSPGSSNENEREDAYFDEIRSFMGKVTYSGNESYNQTRLFSPPSHNIIDVVGKDEEDSESYSDGTPPDEFSDHKAEDYEMKIKTERDEILNNNEQPIELAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00349445;
90% Identity: iTF_00965380;
80% Identity: -