Basic Information

Insect: Myrrha octodecimguttata
Gene Symbol: -
Assembly: GCA_958510865.1
Location: OY294062.1:8428530-8477499[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 7.7e-05 0.013 17.2 0.6 2 23 398 419 398 419 0.97

2 18 2.4e-05 0.004 18.7 1.8 1 20 425 444 425 447 0.94

3 18 1.9e-05 0.0032 19.1 3.0 1 23 453 475 453 475 0.98

4 18 2.2e-05 0.0036 18.9 3.8 1 21 481 501 481 503 0.94

5 18 2.5e-05 0.0042 18.7 4.6 1 23 509 531 509 531 0.99

6 18 2.4e-05 0.004 18.7 5.3 1 23 537 559 537 559 0.97

7 18 1.4e-06 0.00024 22.6 5.9 1 23 565 587 565 587 0.98

8 18 9.4e-08 1.5e-05 26.3 2.7 1 23 593 615 593 615 0.98

9 18 6.9e-05 0.011 17.3 6.7 1 23 621 643 621 643 0.97

10 18 4.1e-05 0.0067 18.0 5.8 1 23 649 671 649 671 0.97

11 18 4.5e-07 7.3e-05 24.2 2.8 1 23 677 699 677 699 0.98

12 18 3.2e-05 0.0053 18.4 8.0 1 23 705 727 705 727 0.98

13 18 2.7e-05 0.0044 18.6 9.1 1 23 733 755 733 755 0.98

14 18 1.6e-05 0.0027 19.3 7.7 1 23 761 783 761 783 0.98

15 18 1.1e-05 0.0017 19.9 7.1 1 23 789 811 789 811 0.97

16 18 0.00016 0.026 16.2 0.2 1 23 817 839 817 839 0.97

17 18 0.025 4.1 9.3 5.1 1 23 849 871 849 871 0.98

18 18 2.1e-07 3.4e-05 25.2 1.0 1 23 877 899 877 899 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	7.7e-05	0.013	17.2	0.6	2	23	398	419	398	419	0.97
2	18	2.4e-05	0.004	18.7	1.8	1	20	425	444	425	447	0.94
3	18	1.9e-05	0.0032	19.1	3.0	1	23	453	475	453	475	0.98
4	18	2.2e-05	0.0036	18.9	3.8	1	21	481	501	481	503	0.94
5	18	2.5e-05	0.0042	18.7	4.6	1	23	509	531	509	531	0.99
6	18	2.4e-05	0.004	18.7	5.3	1	23	537	559	537	559	0.97
7	18	1.4e-06	0.00024	22.6	5.9	1	23	565	587	565	587	0.98
8	18	9.4e-08	1.5e-05	26.3	2.7	1	23	593	615	593	615	0.98
9	18	6.9e-05	0.011	17.3	6.7	1	23	621	643	621	643	0.97
10	18	4.1e-05	0.0067	18.0	5.8	1	23	649	671	649	671	0.97
11	18	4.5e-07	7.3e-05	24.2	2.8	1	23	677	699	677	699	0.98
12	18	3.2e-05	0.0053	18.4	8.0	1	23	705	727	705	727	0.98
13	18	2.7e-05	0.0044	18.6	9.1	1	23	733	755	733	755	0.98
14	18	1.6e-05	0.0027	19.3	7.7	1	23	761	783	761	783	0.98
15	18	1.1e-05	0.0017	19.9	7.1	1	23	789	811	789	811	0.97
16	18	0.00016	0.026	16.2	0.2	1	23	817	839	817	839	0.97
17	18	0.025	4.1	9.3	5.1	1	23	849	871	849	871	0.98
18	18	2.1e-07	3.4e-05	25.2	1.0	1	23	877	899	877	899	0.98

Sequence Information

Coding Sequence: ATGTTTCCTTCTgttgagAGATCGTTACCCTCGTCAACAATTCCTACTGACTTACGAGTCAACACTACTGCATTGAATACAGTTGCATTAAGTGCCAGTGTGGCTAAGTATTGGGTATTAACTAATCTTCTGACAAGTCCTATACCGCAAGTTTCAGTCTATGGTCCACTAGGGGCTGGAAGAGATGGGCAAAAATTAAGTCAGGAAGCTATGCTATCTCAACATGGGCTCATGCCAACGGAGCCTTTATTAATTCCTCAGCATTCCCAAATTCCTGTTAGTATCTCCACATCACAAGGTATAGCAAACCTAGCTATTCCAGCTGGTGCTATGCATATAGACAGTCAGCATAATCACCCATCTTTGTCTCACCTTAATCAACAGCATGCTGAGAATGTGTCTAATCAGCAAAATCAAATTAGAGAGATGTCTCACCACTCCACCCATTCTTCCCACACACAACATCCACAACAGCAAAATATGGTGCAAGTTCAGGTTCAAGATAACAACATGGTATCGGTTATAGAAGATAACAAGGAACATAAGGAGGTTATAGCTAATCATATAGCTCAGGCACATGCTCATGCCCAAGCACAAGCACAGCTTCATATCAATGAAAATCATCATATGAACCATCAACCACTAACTGTGCAGCAGCTGCAGCATCAAGTTCAACAGGTGTTAGATAATGTGGCTCGTCTTGAGAGTTCTGTAGAGAATAACCAAAATCAGCCCAACAGTGATGTGCACATGAATGATAATATTCAAATAGTaaaagatgaaaaaaatcaacccCAGCACCAAAACTGCAAAATCCTACCAAGTCAATTTGGCTTGCATAATCTGAAAGAAAATCTCATGGATGTTCGAACTTCTGATGGTTCGATTTTAAAAATATCAGCTAATGTTCAGGAACAAGAATTAGTTAAAACTTTAGGTGTTGAAATGGTACAGAATATGTACAAGgTCAATGTTGATGATCTCAACCAACTACTGGCATATCATGAAGTATTTGGAAAACTGCAGGGTGAACTTCCTACAGGAAATACGCAGGGAATTATTCAAAGTACAGGGAATAGTGTAGCTCTACAAAATCAGAGTTCTAATATAACAGTACAAACTAAAGATGAACAGGAACCTTCAACAAGCAATAATATTGAGAATGGACCAAGCATCATTAATGGAAGCAATGTGTGTGATTTGTGTGGAAAGATGTTTCAGTTTCGATATCAGTTGATTGTTCATAGACGTTACCATACTGAACGAAAACCTTTCACCTGCCAAGTATGTGGAAAAGCTTTTTCTAATGCTCAGGAACTGACAAGACATGGAAAATGTCATTTGGGTGGCAGTATGTTTACTTGTTCAGTTTGTTTCCATGTGTTTGCTAATAATCAGTCATTGGAGAGACATATGAAGAGACATTCCACTGACAAACCATACAACTGTTCGATGTGTGGAAAATCTTTTGCAAGAAAAGAACATTTGGAAAACCATGCCAGGTGCCATACAGGTGAAACCCCATATCGATGCCAGTACTGTGCTAAAACATTCACCAGAAAAGAACATATGGTCAACCATGTACGTAAGCATACTGGAGAAACTCCACATCGTTgtgaaatatgtaaaaaatcATTCACAAGGAAGGAACATTTCATGAATCACGTGATGTGGCATACCGGTGAGACTCCTCATCAGTGTACCATTTGCAATAAGAAGTATACGAGAAAAGAACATCTAGCAAATCATATGAGGTCTCATACAAATGACACCCCTTTCCGCTGTGAGATATGTGGAAAGTCCTTCACTCGCAAAGAGCACTTCACGAATCACATCATGTGGCATACAGGGGAAACTCCTCATAGATGTGATTTTTGTTCGAAAACTTTTACCAGAAAAGAACATCTTTTGAATCATGTGAGGCAACATACAGgTGAGTCACCTCATCGATGCGGCTTCTGTTCCAAATCTTTCACCAGAAAAGAACATCTCATCAACCATGTAAGGCAGCATACAGGAGAAACACCTTTCAGGTGCAGCTATTGTCCAAAGGCCTTCACGAGAAAGGATCATTTGGTTAATCATGTGAGACAACACACTGGGGAATCTCCACATAAGTGTACATTCTGTACTAAATCCTTTACCAGAAAAGAACATCTCAATAATCATGTACGACAACATACAGGTGAATCTCCCCATCGATGTCACTTTTGTTCGAAATCTTTCACAAGAAAGGAGCATTTGACCAATCATGTTAGAATTCACACAGGGGAGTCTCCACATCGTTGCGAGTTCTGTCAGAAAACTTTTACTCGCAAAGAACATCTGACCAACCATCTTCGACAACATACTGGAGAAACACCTCATTGTTGCAACGTATGCTCCAAACCCTTCACAAGAAAAGAACATTTGATTAATCATATGCGATCTCATACAGGAGAGAGGCCCTTTGCTTGTGGTGAATGTGGAAAGTCATTCCCATTGAAGGGCAATTTACTGTTCCATCAGAGGTCCCATAATAAAGGTGCGCAGGCTGACAGACCTTTCCGTTGTGATTTATGTGATAAGGATTTCATGTGCAAAGGACACTTAGTTTCCCACCGTAGATCGCATAGTGTGGAAAGGCCCCATGTGTGTCCAGATTGTGGaaaaacctttgttgaaaaagGTAACATGATGAGGCATCTGCGCAAACATGCTACGGATAATGCTCAGTTAAATTCTTCTCAGTCTCTGAATCCCCAGTCACAATCACAGGCTTATAATCTGCAAATACCACAAGTCAGTCAGCCTACAAGTCCACCAACAGGAGGAACAATTGTCTCACAACAAGGACCTCCTCCACCTCAACACCTGTCAATGCATGCCCCCCCTCCGCCTGGGGCACATCCCGTTTTAGTGCCTACACCCAATGGTAATGTACTGGCATCCTACTAG
Protein Sequence: MFPSVERSLPSSTIPTDLRVNTTALNTVALSASVAKYWVLTNLLTSPIPQVSVYGPLGAGRDGQKLSQEAMLSQHGLMPTEPLLIPQHSQIPVSISTSQGIANLAIPAGAMHIDSQHNHPSLSHLNQQHAENVSNQQNQIREMSHHSTHSSHTQHPQQQNMVQVQVQDNNMVSVIEDNKEHKEVIANHIAQAHAHAQAQAQLHINENHHMNHQPLTVQQLQHQVQQVLDNVARLESSVENNQNQPNSDVHMNDNIQIVKDEKNQPQHQNCKILPSQFGLHNLKENLMDVRTSDGSILKISANVQEQELVKTLGVEMVQNMYKVNVDDLNQLLAYHEVFGKLQGELPTGNTQGIIQSTGNSVALQNQSSNITVQTKDEQEPSTSNNIENGPSIINGSNVCDLCGKMFQFRYQLIVHRRYHTERKPFTCQVCGKAFSNAQELTRHGKCHLGGSMFTCSVCFHVFANNQSLERHMKRHSTDKPYNCSMCGKSFARKEHLENHARCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHQCTICNKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLINHVRQHTGETPFRCSYCPKAFTRKDHLVNHVRQHTGESPHKCTFCTKSFTRKEHLNNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNVCSKPFTRKEHLINHMRSHTGERPFACGECGKSFPLKGNLLFHQRSHNKGAQADRPFRCDLCDKDFMCKGHLVSHRRSHSVERPHVCPDCGKTFVEKGNMMRHLRKHATDNAQLNSSQSLNPQSQSQAYNLQIPQVSQPTSPPTGGTIVSQQGPPPPQHLSMHAPPPPGAHPVLVPTPNGNVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00020677;
90% Identity: iTF_00965363; iTF_00020677; iTF_00349418;
80% Identity: -