Basic Information

Insect: Coccinella septempunctata
Gene Symbol: -
Assembly: GCA_907165205.1
Location: OU015579.1:4821042-4828812[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 7.6e-05 0.013 17.1 0.6 2 23 413 434 413 434 0.97

2 18 2.4e-05 0.0041 18.7 1.8 1 20 440 459 440 462 0.94

3 18 1.9e-05 0.0032 19.0 3.0 1 23 468 490 468 490 0.98

4 18 8.5e-06 0.0014 20.1 4.3 1 21 496 516 496 518 0.95

5 18 0.00013 0.021 16.4 4.7 1 23 524 546 524 546 0.99

6 18 2.4e-05 0.004 18.7 5.3 1 23 552 574 552 574 0.97

7 18 1.5e-06 0.00025 22.5 5.8 1 23 580 602 580 602 0.98

8 18 9.3e-08 1.6e-05 26.3 2.7 1 23 608 630 608 630 0.98

9 18 6.9e-05 0.012 17.3 6.7 1 23 636 658 636 658 0.97

10 18 4e-05 0.0068 18.0 5.8 1 23 664 686 664 686 0.97

11 18 4.4e-07 7.4e-05 24.2 2.8 1 23 692 714 692 714 0.98

12 18 3.2e-05 0.0054 18.3 8.0 1 23 720 742 720 742 0.98

13 18 2.7e-05 0.0045 18.6 9.1 1 23 748 770 748 770 0.98

14 18 1.6e-05 0.0027 19.3 7.7 1 23 776 798 776 798 0.98

15 18 1e-05 0.0018 19.9 7.1 1 23 804 826 804 826 0.97

16 18 0.00016 0.026 16.2 0.2 1 23 832 854 832 854 0.97

17 18 0.024 4.1 9.3 5.1 1 23 864 886 864 886 0.98

18 18 2.1e-07 3.5e-05 25.2 1.0 1 23 892 914 892 914 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	7.6e-05	0.013	17.1	0.6	2	23	413	434	413	434	0.97
2	18	2.4e-05	0.0041	18.7	1.8	1	20	440	459	440	462	0.94
3	18	1.9e-05	0.0032	19.0	3.0	1	23	468	490	468	490	0.98
4	18	8.5e-06	0.0014	20.1	4.3	1	21	496	516	496	518	0.95
5	18	0.00013	0.021	16.4	4.7	1	23	524	546	524	546	0.99
6	18	2.4e-05	0.004	18.7	5.3	1	23	552	574	552	574	0.97
7	18	1.5e-06	0.00025	22.5	5.8	1	23	580	602	580	602	0.98
8	18	9.3e-08	1.6e-05	26.3	2.7	1	23	608	630	608	630	0.98
9	18	6.9e-05	0.012	17.3	6.7	1	23	636	658	636	658	0.97
10	18	4e-05	0.0068	18.0	5.8	1	23	664	686	664	686	0.97
11	18	4.4e-07	7.4e-05	24.2	2.8	1	23	692	714	692	714	0.98
12	18	3.2e-05	0.0054	18.3	8.0	1	23	720	742	720	742	0.98
13	18	2.7e-05	0.0045	18.6	9.1	1	23	748	770	748	770	0.98
14	18	1.6e-05	0.0027	19.3	7.7	1	23	776	798	776	798	0.98
15	18	1e-05	0.0018	19.9	7.1	1	23	804	826	804	826	0.97
16	18	0.00016	0.026	16.2	0.2	1	23	832	854	832	854	0.97
17	18	0.024	4.1	9.3	5.1	1	23	864	886	864	886	0.98
18	18	2.1e-07	3.5e-05	25.2	1.0	1	23	892	914	892	914	0.98

Sequence Information

Coding Sequence: ATGAATACAAGTGAGAACAATCCTTTAAATAATGGGACTCATAATTCTAACAACTCCGAGGTTGAGAGATCGTTACCATCTTCAACAATACCCACTGACTTACGAGTCAACACCACAGCACTAAATACTGTTGCTTTGAGCGCTAGTGTGGCCAAGTATTGGGTATTGACTAATCTTCTAACTGCTCCTATACCCCAGGTTTCAGTTTATGGCACATTAGGAAGAGATGGACAAAAATTAAGCCAGGAAGCCATGTTGTCTCAACACGGGCTCATGCCAACAGAGCCTCTATTATTACCTCAACACTCACAAATCCCAGTCAGTATTTCCACATCTCAGGGTGTTACCAATTTGGCCCTTCCAGCTGGTAATATGCATTTAGACAGTCAACATAATCATACGTCACTATCCCACCACTCCCAGCAGCAGCAGCAGCAGTCTGAGAATATGTCAAACCAGCAAAATCAAATTAGAGAGATGTCTCAACATCCGACTCATTCTTCCCACACTCAACATTCACAGCAGCAAAACATGGTACAAGTTCAGGTTCAAGATAATTTGGTGTCTGTTATAGAAGATAACAAAGAACACAAGGAAGCGATAGCAAATCATATCGCCCAGGCGCATGCCCACGCGCAAGCGCAACTCCACATCAACGAAAATCATCATATAAACCACCAGGCGCTTACTGTACAACAATTACAGCATCAAGTTCAACAAGTTTTAGATAACGTGGTACGTCTAGAAAATTCTGTTGAGAACAATCAAAATCATTCCAATAACGATGTCCATATGAATGAAAATCTTCATATAGTGAAAGACGAAAAGAACCAATCGCAGCAGCAGAACTGCAACAAAGTGTTGCCTCCTCAATTTGGACTTCATAACCTAAAAGAAAACCTCATGGATGTAAGAACTCCAGATGGATCAATTTTGAAGATATCCGCCAATGTTCAGGAGCAAGAATTAGTGAAAACATTGGGTGTTGAGATGGTACAAAACATGTACAAGGTTAACGTAGACGATTTGAACCAACTACTTGCATATCATGAAGTTTTTGGAAAACTACAGGGTGAGCTATCGACAGGTAATGCTCAAGGGATAATACAAAGCACGGGGACCAATGTGGGGATGCAGAATCAGGCCTCTAATGTACCTGTTCAAACCAAGGATGAACAGGAAGCCTCAACAAGTAATAACATCGAAAACGCACCAAGTATCATCAATAGTAGTAATGTTTGTGATTTGTGTGGAAAGATGTTTCAATTCAGATATCAATTGATTGTACATAGGCGTTATCACACTGAGAGGAAACCTTTCACCTGCCAAGTATGCGGTAAGGCTTTTTCGAATGCTCAGGAGCTAACAAGACATGGCAAGTGTCATTTGGGCGGTAGCATGTTCACATGTTCCGTTTGTTTTCATGTGTTCGCCAACAATCAATCTCTTGAACGCCATATGAAAAGGCATTCTACTGATAAACCCTACAACTGTTCGATTTGTGGAAAATCGTTCGCAAGGAAGGAGCATTTAGAGAATCATACAAGGTGCCATACCGGTGAAACTCCCTATCGATGCCAATTTTGTGCTAAAACATTCACGAGAAAAGAGCATATGGTGAATCACGTTAGAAAGCATACAGGCGAAACACCCCATAGGTGTGAGATATGCAAGAAATCTTTCACGAGAAAGGAACACTTTATGAACCACGTTATGTGGCATACCGGAGAAACCCCACACCAGTGCAGTATATGCAATAAGAAGTACACTAGAAAAGAGCATCTGGCCAATCACATGAGGTCTCATACGAACGACACTCCATTCAGATGTGAAATATGTGGGAAGTCATTCACTCGGAAGGAGCACTTTACGAATCACATCATGTGGCACACCGGGGAAACTCCTCACCGATGCGATTTCTGTTCGAAGACTTTCACCAGAAAGGAGCACCTTCTGAACCACGTTAGACAACATACAGGTGAATCTCCTCATCGTTGTGGCTTCTGTTCGAAATCTTTCACCAGAAAGGAACATCTCATTAATCACGTCAGGCAACACACTGGTGAAACACCCTTCAGGTGTAGCTATTGTCCGAAAGCCTTCACAAGGAAGGATCATCTGGTGAATCACGTTAGGCAACATACGGGGGAATCCCCTCATAAATGTACTTTCTGCACCAAATCTTTTACCAGAAAAGAACATCTGAACAATCACGTCAGGCAGCATACAGGTGAATCACCTCATAGGTGTCACTTTTGTTCCAAATCTTTCACGAGGAAAGAGCATCTAACCAATCACGTGAGGATTCATACAGGGGAGTCTCCTCATCGTTGCGAGTTCTGTCAGAAGACATTTACCAGAAAGGAACATTTAACGAACCATCTTCGACAACATACTGGAGAAACTCCCCATTGTTGCAATGTATGCTCCAAACCCTTCACAAGAAAAGAACATCTCATTAATCATATGCGATCTCATACAGGAGAGAGGCCTTTTGCCTGTGGTGAGTGTGGAAAATCCTTCCCGTTGAAGGGTAATCTACTGTTCCATCAAAGGTCGCATAACAAGGGTGCTCAGGCCGACAGACCGTTCCGTTGTGATCTGTGCGATAAGGATTTCATGTGCAAAGGACACTTAGTTTCTCACCGTAGATCACATAGTGTTGAAAGGCCGCATGTGTGTCCCGATTGTGGAAAAACGTTTGTCGAGAAGGGTAACATGATGAGACATCTACGCAAACATGCTTCCGATAATGCTCAGCTCAATTCATCCCAATCCTTGAACCCCCAGTCTCAAGGCCAGTCTACCAATCTTCAGATACCGCAAGTTGGTCAGCCTACTAGCCCGCCATCTGGTGGAACAATTGTCTCACAACAACAACAGCAGGGACCCCCACCACAACATCTGACGATGCATGCTCCGCCTCCACCTGGAAGCCACCCAGTCTTAGTGCCTGCACCCAACGGTAATGTCCTGGCCTCCTATTAA
Protein Sequence: MNTSENNPLNNGTHNSNNSEVERSLPSSTIPTDLRVNTTALNTVALSASVAKYWVLTNLLTAPIPQVSVYGTLGRDGQKLSQEAMLSQHGLMPTEPLLLPQHSQIPVSISTSQGVTNLALPAGNMHLDSQHNHTSLSHHSQQQQQQSENMSNQQNQIREMSQHPTHSSHTQHSQQQNMVQVQVQDNLVSVIEDNKEHKEAIANHIAQAHAHAQAQLHINENHHINHQALTVQQLQHQVQQVLDNVVRLENSVENNQNHSNNDVHMNENLHIVKDEKNQSQQQNCNKVLPPQFGLHNLKENLMDVRTPDGSILKISANVQEQELVKTLGVEMVQNMYKVNVDDLNQLLAYHEVFGKLQGELSTGNAQGIIQSTGTNVGMQNQASNVPVQTKDEQEASTSNNIENAPSIINSSNVCDLCGKMFQFRYQLIVHRRYHTERKPFTCQVCGKAFSNAQELTRHGKCHLGGSMFTCSVCFHVFANNQSLERHMKRHSTDKPYNCSICGKSFARKEHLENHTRCHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHQCSICNKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLINHVRQHTGETPFRCSYCPKAFTRKDHLVNHVRQHTGESPHKCTFCTKSFTRKEHLNNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNVCSKPFTRKEHLINHMRSHTGERPFACGECGKSFPLKGNLLFHQRSHNKGAQADRPFRCDLCDKDFMCKGHLVSHRRSHSVERPHVCPDCGKTFVEKGNMMRHLRKHASDNAQLNSSQSLNPQSQGQSTNLQIPQVGQPTSPPSGGTIVSQQQQQGPPPQHLTMHAPPPPGSHPVLVPAPNGNVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00020677;
90% Identity: iTF_01024267;
80% Identity: -