Moct021360.1
Basic Information
- Insect
- Myrrha octodecimguttata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_958510865.1
- Location
- OY294060.1:16486729-16509626[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.052 2.3e+03 -1.1 0.0 207 230 33 55 8 72 0.67 2 2 4.7e-50 2e-45 156.6 16.7 1 126 90 203 90 203 0.92
Sequence Information
- Coding Sequence
- ATGGAGAAAATAACTAAACTCTCGGAAGAAGATATGTACGGTTGCTTCTCTTCGGTTAAGAGAGTGCATGAATTAGATGATTCCGTGTCCAGTGCCAGTGATCAGGAGGCTGTTTTGCAGTCGGTTTCTGGCAGTTTGAACGACGATCTTGATGAACTCGCGGATCCACCCAAACGTGGTTCGGATTATGAAAGTGAAATTCACAATTTCAGCGATGACTACAGTGATGACATCATTTCGCAGTTCATGGAATTGGCTTGTGGTGAAGCTGAAGAAAGACTACGAGTGAAGCGGCAAGCAAGAGCCGAAGCACGGGAGATTCGTATGAGAGAGCTGGAGAAGCAACAGAAAGAACAAGAGGAGAATGCCGATCGGCAATTCGACATGCTGGTGGAACCTGTGGCCAGGACCACAAGAACAAGCATCAGTAGATACATGTCCAGCCGAAGAAGTTCTGAGGATTCCCTTGAGGACGGAGGCAGTCTCAGAGAATTGAGACATGAACTCAGAGAAGTAGAAGACAAGTTCAGGAAAGCTATGATAACCAATGCTCAACTTGATAACGAAAAGGCCTCCCTCACTTATCAAATAGAACTACTTAAAGACAAGTAA
- Protein Sequence
- MEKITKLSEEDMYGCFSSVKRVHELDDSVSSASDQEAVLQSVSGSLNDDLDELADPPKRGSDYESEIHNFSDDYSDDIISQFMELACGEAEERLRVKRQARAEAREIRMRELEKQQKEQEENADRQFDMLVEPVARTTRTSISRYMSSRRSSEDSLEDGGSLRELRHELREVEDKFRKAMITNAQLDNEKASLTYQIELLKDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -