Moct002407.1
Basic Information
- Insect
- Myrrha octodecimguttata
- Gene Symbol
- TIGD6
- Assembly
- GCA_958510865.1
- Location
- OY294056.1:5552715-5554606[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.2e-09 2.3e-06 28.4 0.0 1 42 41 82 41 85 0.92
Sequence Information
- Coding Sequence
- ATGGAACGTAGCAACAATCCTTGTCGCGTGAAGATCGACGAAGGGTGGTCTCTTACGAACAGCGATGCAACCGGCAATATGCCAAGAAATCGTCAGAGGACCACCGCTAAGGCGGCATGGACTGAAGAAGACCTTCAATCTGCTAAAAGCGCGATCGAAAGAGGTTTGTCCAAAAGAAAAGCCGCAAAACAATATAACATACCACTTACTACTCTGAGAGATCGactaaaaaatgaaaacatgaGTAACCCAAGACTAGGTCGGAAGCCCGTTTTCACCCAACAGCAGGAAACTGAAATTGCCGAACAAGTTAAGTTGTTGGGTTCGCTATACTATGGACTCAATGTCGCAGATTTGCGTGAATTTGTTCATAAATATGCTGTGCTCAACAATATCAAACACAATTTTGATAAATGCAGCAAATCAGCTGGATTGGATTGGGTACACGCCTTTATGAGACGCAATGCTTCAGTTTCTATACGAAAAGCTGAAGCGACGAGCTTAAATAGAATTTCTGCTTTCAACAAGGGAGAAATTACGCTTTTCTATGATAAACTTGGCgacttattggaaaaatataagttTATTCCCAACAACATTTACAACGCTGACGAAACTGGTATCACCACGGTGATAGAACCAGGAAAAGTGCTCGCCGAAAAAGGACAAAAAAGAGTAGGTTCTGTTACAAGCGGCGAACGAGGAAGCAACGTAACAGATATGTGTGCGATGAGTGCAGCCGGAAACTTCATACCGCCCATGTTTATTTTTGCCAGACAGAGAATGACACCTTTATTAGAAAAAGATGGGCCAGCTGGTGCGTTATATACCAACTCTAAAAATGGCTGGATAAACGAAGACTTATTTGTCACTTGGCTCAAACATTTCGCAGCATTCGCTAAGCCTACCAAAGAATCACCTGTGTTGTTAATTTTGGACAATCACAGCAGTCATATTTCCcttcaagctttcaatttttgcAAAGGAAACCACATCACTATGCTCTCCATTCCACCACACAGTTCTCACAGAACGCAGCCGTTGGATGTGTCTTTTTATGGGCCGCTGAGAGCTGCTTATAGGCATGAATGCAACAGGCACATGAAGACACATTTAATGTCCAAAATAACTCCATACGATATTGTAGGCCTTTTCAATAAAGCATACGTACAGGTTGCGAATATAAGTAAAGCAGAATCTGGATTTCGAGCCACGGGAATTTACCCATTGAACCCCAATGTTTTCACAGATCAAGATTTTCTGGCAGCGTCGCTGATGGCACAGGAATCGGAACACATTGCTGAAAGCCAAGACCCAAATGTCCAGGATTTTGAAGATGCGCAGTCTGATGGTATGGCCATAATTTCGGGACATACAATATCTCCGTTGGCAGGACCATCAAATAAGGATCAATGCTCTGGATCTGTTTTGGCAGTTGCTTATAACCAAGAACTTGTTTATGAGCAAAGAACTCCGGTATCTTTTGCTACAATAGCCACGACACCAACTATTGCACCAATGTGTGTTGACGAAGGAGAACTAAGGTTGTTCATTGTTTGCTCCGATATATCAGCGAAAATTGTGAATATAAATCGGTGTTAA
- Protein Sequence
- MERSNNPCRVKIDEGWSLTNSDATGNMPRNRQRTTAKAAWTEEDLQSAKSAIERGLSKRKAAKQYNIPLTTLRDRLKNENMSNPRLGRKPVFTQQQETEIAEQVKLLGSLYYGLNVADLREFVHKYAVLNNIKHNFDKCSKSAGLDWVHAFMRRNASVSIRKAEATSLNRISAFNKGEITLFYDKLGDLLEKYKFIPNNIYNADETGITTVIEPGKVLAEKGQKRVGSVTSGERGSNVTDMCAMSAAGNFIPPMFIFARQRMTPLLEKDGPAGALYTNSKNGWINEDLFVTWLKHFAAFAKPTKESPVLLILDNHSSHISLQAFNFCKGNHITMLSIPPHSSHRTQPLDVSFYGPLRAAYRHECNRHMKTHLMSKITPYDIVGLFNKAYVQVANISKAESGFRATGIYPLNPNVFTDQDFLAASLMAQESEHIAESQDPNVQDFEDAQSDGMAIISGHTISPLAGPSNKDQCSGSVLAVAYNQELVYEQRTPVSFATIATTPTIAPMCVDEGELRLFIVCSDISAKIVNINRC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01275194;
- 90% Identity
- iTF_01023778;
- 80% Identity
- -