Moct008805.1
Basic Information
- Insect
- Myrrha octodecimguttata
- Gene Symbol
- Jrkl_1
- Assembly
- GCA_958510865.1
- Location
- OY294057.1:27203548-27205425[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.1e-10 3.9e-07 30.9 0.0 1 42 15 56 15 59 0.92
Sequence Information
- Coding Sequence
- ATGCCAAGAAATCGTCAGAGGACCACCGCTAAGGCGGCATGGACCGAAGAAGACCTTCAATCTGCTAAAAGCGCGATTGAAAGAGGTTTGTCCAAAAGAAAAGCCGCAAAACAATATAACATACCATTTACTACTCTGAGAGATCGactaaaaaatgaaaacatgaGTAACCCAAGACTAGGTCGGAAGCCCGTTTTCACCCAACAGCAAGAAACTGAAATTGCCGAACAAGTTAAGTTGTTGGGTTCGCTATACTATGGACTCAATGTCGCAGATTTGCGTAAATTTGTTTATAAATATGCTGAGCTCAACAATATCAAACACAATTTTGATAAATGCAGCAAATCAGCTGGATTGGATTGGGTACACGCCTTTATGAGACGCAATCCTTCAGTTTCTATACGAAAAGCTGAAGCGACGAGCTTAAATAGAATTTCTGCTTTCAACAAGGGAGAAATAACGCTTTTCTATGATAAACTTGGCgacttattggaaaaatataagttTATTCCCAACAACATTTACAACGCTGACGAAACTGGTATCACCACGGTGACAGAACCAGGAAAAGTGCTCGCCGAAAAAGGACAAAGAAGAGTAGGTTCTGTTACAAGCGGAGAACGAGGAAGCAACGTAACAGTTATGTGTGCGATGAGTGCAGCCGGAAACTTCATACCGCCCATGTTTATTTTTGCCAGACAGAGAATGACACCTTTATTAGGAAAAGATGGGCCAGCTGGTGCGTTATATACCAACTCTAAAAATGGCTGGATAAACGAAGACTTATTTGTCACTTGGCTCAAACATTTCGCAGCATTCGCTAAGCCTACCAAAGAATCACCTGTGTTGTTAATTTTGGACAATCACAGTAGTCATATTTCTcttcaagctttcaatttttgcAAAGGAAACCACATCACTATGCTCTCCATTCCACCACACAGTTCTCACAGAACGCAGCCGTTGGATGTGTCTTTTTATGGGCCGCTGAAAGCTGCTTATAGGAATGAATGCAACAGGCACATGAAGACACATTTGATGTCCAAAATAACTCCATACGATATTGTAGGCCTTTTCAATAAAGCATACGTAAAAGTTGCGAATATAAGTAAAGCAGAATCTGGATTTCGAGCCACGGGAATTCACCCATTGAACCCCAATGTTTTCACAGATCAAGATTTTCTGGCAGCGTCGCTGATGGCACAGGAATCGGAACACATTGCTGAAAGCCAAGACCCAAATGTCCAGAATTTTGAAGATGCGCAGTCTGATGGTATGGCCATAATTTCGGGACATACAATATCTCCGTTGGCAGGACCATCAAATAAGGATCAATGCTCTGGATCTGTTTTGGCAGTTGCTTATAACCAAGATTTTGTTTATGAGCAAAGAACTCCGGTATCTTTTGCTACAATAGCCACGACACCAACTATTGCACCATCTTCTAGGCCAGGTCAAAGGAAGCGAAAACAACATGCTACCATATTAACTGCGACTcctatgaaaattattttagaggacagagaaaagaaaaaaatagcGAAACTCAATAAGAATAGAAAAGATGATGAATCAAGACCAAGTAAAGTTGtcaaagaaaagaaaaataaacacacGAAACAAAAGTCTCACAAGAGAAAAATTCTACAGGAAAGTTCTTCAGAGAGTGAGGATGAAGAGCACCTTTGTGACGATGACAGTGATGACGAAATTAATGTGGATGATGAAAATTATAACAAATGTATTATTTGCgaagaattcggaaaaaataacgagTTGTGGTATCGCTGCACCATTTGCGGTCTGTGGGCTCATGctatatgtacagggtgggatTCGCCAGATGGATACATCTGCGATTTATGTTtcctaaaataa
- Protein Sequence
- MPRNRQRTTAKAAWTEEDLQSAKSAIERGLSKRKAAKQYNIPFTTLRDRLKNENMSNPRLGRKPVFTQQQETEIAEQVKLLGSLYYGLNVADLRKFVYKYAELNNIKHNFDKCSKSAGLDWVHAFMRRNPSVSIRKAEATSLNRISAFNKGEITLFYDKLGDLLEKYKFIPNNIYNADETGITTVTEPGKVLAEKGQRRVGSVTSGERGSNVTVMCAMSAAGNFIPPMFIFARQRMTPLLGKDGPAGALYTNSKNGWINEDLFVTWLKHFAAFAKPTKESPVLLILDNHSSHISLQAFNFCKGNHITMLSIPPHSSHRTQPLDVSFYGPLKAAYRNECNRHMKTHLMSKITPYDIVGLFNKAYVKVANISKAESGFRATGIHPLNPNVFTDQDFLAASLMAQESEHIAESQDPNVQNFEDAQSDGMAIISGHTISPLAGPSNKDQCSGSVLAVAYNQDFVYEQRTPVSFATIATTPTIAPSSRPGQRKRKQHATILTATPMKIILEDREKKKIAKLNKNRKDDESRPSKVVKEKKNKHTKQKSHKRKILQESSSESEDEEHLCDDDSDDEINVDDENYNKCIICEEFGKNNELWYRCTICGLWAHAICTGWDSPDGYICDLCFLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01275194;
- 90% Identity
- iTF_01023788;
- 80% Identity
- -