Moct005924.1
Basic Information
- Insect
- Myrrha octodecimguttata
- Gene Symbol
- -
- Assembly
- GCA_958510865.1
- Location
- OY294056.1:66344622-66358711[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.1e-11 2.2e-08 34.9 0.0 1 39 317 356 317 360 0.90 2 4 7.7e-12 4.2e-09 37.2 0.0 1 39 371 409 371 412 0.95 3 4 1.8e-18 9.9e-16 58.4 0.0 1 45 426 471 426 471 0.98 4 4 4.9e-16 2.7e-13 50.6 0.0 1 40 478 518 478 522 0.93
Sequence Information
- Coding Sequence
- ATGTCATCCGTTCATAGTGAATTAGCCATCACCCTTTTCGGATTTTTACCGTACGCCACTGGCTGGACCCGGGGGAGCCTGGAAGTTGGCGAAAGCATTCTCAAGATGCAAAGACACAGTGAGAAGTTGTACGTCCTTGAACCCGtCGCTCCTCAAACTGCCGATCAGCTCCGCATCAAAGGACTCTGCGAATCTCACAATAAGGAAGACAATCCAGATTTCGTGCATTTCCACTCGTCTAACGTAACAAGAATAAGAAAATCGTCCCATCTGAGGGACGAAGATCCTCTGGATGAATTCAGAAAGGAGAAAGTGAGGAAGTTGACAACTCCTAAATTGGAACAGCTTGACGACGTTGAAGAAGCTGCCGTACACAATGAACGAAATGATGGAATGCCTGTGAATTCTGATGATACGGTACATGATAGGGCGGATACCGAACCAAAAACAGCATTAAACATGAGTAGCCAGGGGCTACTTGCTGGCCAAACGTTATTCTCCCATTTCGGGGTGGATACAGATGACTTTCCTCCAGAGCCGCCGGCTCCATCGGCGATACCAGTTGGTCACGTGGACATGGACCATTCACCCACAAGAACGTTGCTCAATAGTAGTTCCATCCATAGAACGGACATCTCCGACTCTAAATACGAAATCAAGAAAGAGGCCATAGACATCAAATTCGAAACGTTGCGTTCTTACGATCAAGACTCCTTGCTCGAGATGGATTCGCACAATTCTAGGATGTCCGGTGCTGATCTGTCCAGAGATAGCCATGAGGACCAGGATCAGTCCATGCATTCCATGTTGGTGACCCCCGAACTCATGGGAATGGTGCCCGGGGTGTCTAGTCGTTCTGAAGACATAATGAATGGAAGCGGTGATCTGATGTTGGGGAAAAATTCTTCAGAATCTTCTAGGAATCACACAGGTGGTCCTAAGACTTGGACTCAAGAAGATATGGATATGGCGTTAGACGCTTTGAGAAATCATAATATGAGCTTGACAAAGGCCTCTGCAACCTATGGTATTCCCTCCACTACTCTATGGCAAAGAGCCCATAGATTAGGAATAGACACACCAAAAAAAGAAGGCCCCACAAAATCCTGGACCGAAGAAAACCTTAATAACGCCTTAGATGCCCTAAGAACAGGAACAATATCGGCTAATAAGGCCAGCAAAGCCTTCGGTATTCCAAGTAGCACATTATACAAAATAGCTAGAAGAGAAGGTATTAGATTAGCAGCACCTTTCAATGCAGCGCCTACAACTTGGACCCCAGAAGATCTAGAAAAAGCTCTGGAATCGATACGATCTGGTCAAACGTCGGTTCAAAAAGCATCAACAGAATTTGGCATTCCAACAGGCACACTTTATGGAAGATGTAAGAGGGAGGGTATAGAACTGTCGAGGTCAAATCCAACACCTTGGTCTGAAGATGCCATGGGAGAAGCTTTAGAGGCAGTCAGGCTTGGTCATATGTCTATCAATCAAGCAGCCATCCATTACAATCTACCTTACTCATCTTTATATGGAAGGTTTAAACGAGGTATAAAGTACGATACAGAAAACTTGGAAGGAAATTCAGACAGCAACTCACACCTAGAAGTTGCTTTTGGTATGGAATACGCTAATCCTCATCCTCAGCAGATTCAATATCAGAATCAGACCAGCTGA
- Protein Sequence
- MSSVHSELAITLFGFLPYATGWTRGSLEVGESILKMQRHSEKLYVLEPVAPQTADQLRIKGLCESHNKEDNPDFVHFHSSNVTRIRKSSHLRDEDPLDEFRKEKVRKLTTPKLEQLDDVEEAAVHNERNDGMPVNSDDTVHDRADTEPKTALNMSSQGLLAGQTLFSHFGVDTDDFPPEPPAPSAIPVGHVDMDHSPTRTLLNSSSIHRTDISDSKYEIKKEAIDIKFETLRSYDQDSLLEMDSHNSRMSGADLSRDSHEDQDQSMHSMLVTPELMGMVPGVSSRSEDIMNGSGDLMLGKNSSESSRNHTGGPKTWTQEDMDMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYDTENLEGNSDSNSHLEVAFGMEYANPHPQQIQYQNQTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00415795;
- 90% Identity
- iTF_00349400;
- 80% Identity
- -