Mtes002652.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Myopa tessellatipennis
Gene Symbol
-
Assembly
GCA_943737955.2
Location
OX031314.1:18757590-18759649[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 9.7e-06 0.0013 20.2 0.6 2 23 234 255 233 255 0.93
2 12 1.5e-05 0.0019 19.6 1.5 1 23 261 283 261 283 0.98
3 12 0.00011 0.015 16.9 3.3 1 23 298 320 298 320 0.99
4 12 3.8e-06 0.0005 21.5 2.8 1 23 329 351 329 351 0.99
5 12 1.2e-06 0.00016 23.1 2.6 1 23 357 379 357 379 0.99
6 12 0.00016 0.021 16.4 1.8 1 23 385 407 385 407 0.96
7 12 8.3e-07 0.00011 23.6 1.5 1 23 413 435 413 435 0.95
8 12 0.0039 0.5 12.0 1.5 1 23 441 463 441 463 0.99
9 12 3.9e-05 0.005 18.3 2.4 1 23 469 491 469 491 0.95
10 12 4.1e-05 0.0053 18.3 1.5 1 23 497 519 497 519 0.99
11 12 4e-06 0.00052 21.4 0.7 1 23 525 547 525 547 0.99
12 12 6.7e-06 0.00087 20.7 0.9 1 23 553 575 553 575 0.98

Sequence Information

Coding Sequence
atggATACTTCATCACTAGCTTCCATTAAACGTATGTGTCGCACCTGTATGATCCAGGATCAGAAATTTCACTCCATCTTCGACTACGCTGATAAACCTTTGAAAATCTTTGAAATGCTGTCTACCACAACTCCTCAGCTGCTTATATTGAACAGCGATGAGCTGCCCAAGCAAATTTGTGTGGCATGCCTCAACAAGTTGATGATTGCGTATGGATTCCAACAAATGTGTATCAATTCCGAGAAACATTTTCGACGGATGCTAGCCGCTAAGCTTGTCACAGTTACTTTGCCTTGCGATGCAAAGGAGACTGCTTGTTTGGAAGAGGATCCACTGCTTGCTGAGGAGCATATGAAGATGGAAGAGAATACTGAAAATAAGGAACCTAATGAAGTGCAGCAAGGCTCTCATATTGAAAAATTGATTAGTTCGCCAGAGGTAAGTCCACCCGATAAGGAAGTCAGTCGGGAAGAAGATAGCCAGCAGGGAGAAGATAACCAGAAGTTCAAATATGATTCGGATACTGAGTGGAATGACAGCGCAAGtGCTAAAGATCAAGCGACGACTCCAACGCGTACGCGCAGTCAAACCGCAAGAGATAAAATGGAAGAGCAGACACGCACCTCCAGTATGCACAACGAAACAGGCGTGGATGATATTGAAAAGCCCAACCAACGCAACCGCCGGAAAGGAAATCTACCCTGCCCACACTGCAACAAGTCATTCGACCGGCCCTATCGTTTGAGGCGCCATGCTGGCGTCCACGATCAATCGCGGGCATTTCAATGTGATATCTGCAAATATCGTTTCTCCACAGTTAATCAGTTGGCCCGCCACAAACTTACACACGACGAAACTGCTCAAGCGCGGCGAATACCGCCACCTGAAGGATACAAATGTGCAGAGTGTCCACGTCGTTTTGAAAAATGCGAATCACTTTGCGCGCACATACAGAGCCATCGAAAAGCCGATCCCAGTCAAGCATTCAAATGCGATATTTGCTCCAAGGAATTTCGCACATTCACTTCACTCACTAAACATACTCGTATACATCCCGAGAATCAGAACTTCAAGTGTACAGAATGTGAGAAGTCGTTCACCTTGAAGGCGCACCTCATTGAGCACATGAACAAACATAACGGTTTAAAACCATTTGTGTGCATCTACTGTAACAAAGCATTTCATCAGAACGGCACACTAAAGGAACATCAACGCATTCACACCTGCGAGAAGCCGTTCTTATGTTCACAATGTGGGAAGTCCTTTAaaaatgctagcaacatgcgTCAGCATCTGCTACGTCACTCCGGCGAAAGACGCTTTCAGTGTCCTGAGTGTCCCAGCAAATTCGCCTGTCAGTCGGATCAAATCAAACACATGTCCACGCACCGTACCGTCAAGCCGCACATCTGCGACATCTGCGGCTCGAGCTTTACACGTTCCTACACGCTAACCAAACACAAATACATTCACACCGGTGAGCGACCATACAAGTGCGAGGAGTGCAACATGACttttgttttctttggtgTCATGCGTCGACACATGCGCACGCATACAGGCGAAAAACCGTACAAATGTAAATTCTGCGATCGTGCTTATGCCGAGAGTGGCGACTTGAACAAGCACCTGAGATCGCATGTGGGCGTGAAAACCTACATGTGCGATCAGTGTCCAGAATCGTTCAAGTATCAGATGGAGCTACGTGAACACCAGCGACAGCACTTCAAGGAAAAACAGGCTGCTCTAGAGTTGATTGAACCAAAAgcagaaatttaa
Protein Sequence
MDTSSLASIKRMCRTCMIQDQKFHSIFDYADKPLKIFEMLSTTTPQLLILNSDELPKQICVACLNKLMIAYGFQQMCINSEKHFRRMLAAKLVTVTLPCDAKETACLEEDPLLAEEHMKMEENTENKEPNEVQQGSHIEKLISSPEVSPPDKEVSREEDSQQGEDNQKFKYDSDTEWNDSASAKDQATTPTRTRSQTARDKMEEQTRTSSMHNETGVDDIEKPNQRNRRKGNLPCPHCNKSFDRPYRLRRHAGVHDQSRAFQCDICKYRFSTVNQLARHKLTHDETAQARRIPPPEGYKCAECPRRFEKCESLCAHIQSHRKADPSQAFKCDICSKEFRTFTSLTKHTRIHPENQNFKCTECEKSFTLKAHLIEHMNKHNGLKPFVCIYCNKAFHQNGTLKEHQRIHTCEKPFLCSQCGKSFKNASNMRQHLLRHSGERRFQCPECPSKFACQSDQIKHMSTHRTVKPHICDICGSSFTRSYTLTKHKYIHTGERPYKCEECNMTFVFFGVMRRHMRTHTGEKPYKCKFCDRAYAESGDLNKHLRSHVGVKTYMCDQCPESFKYQMELREHQRQHFKEKQAALELIEPKAEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01023225;
90% Identity
iTF_01023225;
80% Identity
-