Basic Information

Insect: Myopa tessellatipennis
Gene Symbol: -
Assembly: GCA_943737955.2
Location: OX031314.1:18763205-18765259[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.2e-05 0.0015 19.9 1.1 2 23 234 255 233 255 0.93

2 12 3.1e-05 0.004 18.6 1.4 1 23 261 283 261 283 0.98

3 12 7.4e-05 0.0096 17.4 1.4 1 23 298 320 298 320 0.99

4 12 3.8e-06 0.0005 21.5 2.8 1 23 329 351 329 351 0.99

5 12 3.2e-06 0.00041 21.7 3.2 1 23 357 379 357 379 0.99

6 12 0.00016 0.021 16.4 1.8 1 23 385 407 385 407 0.96

7 12 8.3e-07 0.00011 23.6 1.5 1 23 413 435 413 435 0.95

8 12 0.0027 0.35 12.5 1.3 1 23 441 463 441 463 0.99

9 12 3.9e-05 0.005 18.3 2.4 1 23 469 491 469 491 0.95

10 12 4.3e-06 0.00055 21.3 3.2 1 23 497 519 497 519 0.99

11 12 4e-06 0.00052 21.4 0.7 1 23 525 547 525 547 0.99

12 12 1.9e-05 0.0024 19.3 0.6 1 23 553 575 553 575 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.2e-05	0.0015	19.9	1.1	2	23	234	255	233	255	0.93
2	12	3.1e-05	0.004	18.6	1.4	1	23	261	283	261	283	0.98
3	12	7.4e-05	0.0096	17.4	1.4	1	23	298	320	298	320	0.99
4	12	3.8e-06	0.0005	21.5	2.8	1	23	329	351	329	351	0.99
5	12	3.2e-06	0.00041	21.7	3.2	1	23	357	379	357	379	0.99
6	12	0.00016	0.021	16.4	1.8	1	23	385	407	385	407	0.96
7	12	8.3e-07	0.00011	23.6	1.5	1	23	413	435	413	435	0.95
8	12	0.0027	0.35	12.5	1.3	1	23	441	463	441	463	0.99
9	12	3.9e-05	0.005	18.3	2.4	1	23	469	491	469	491	0.95
10	12	4.3e-06	0.00055	21.3	3.2	1	23	497	519	497	519	0.99
11	12	4e-06	0.00052	21.4	0.7	1	23	525	547	525	547	0.99
12	12	1.9e-05	0.0024	19.3	0.6	1	23	553	575	553	575	0.98

Sequence Information

Coding Sequence: atggATACTTCATCACTAGCTTCCGTTAAACGTATGTGTCGCACCTGTATGATCCAGGATCAGAAATTTCACTCCATCTTCGACTACGCTGATAAACCTTTGAAGATCTTTGAAATGCTGTCTACCACAACTCCTCAGCTGCTTATATTGAACAGCGATGAGCTGCCCAAGCAAATTTGTGTGGCATGCCTCAACAAGTTGATGATTGCGTATGGATTCCAACAAATGTGTATCAATTCCGAGAAACATTTTCGACGGATGCTAGCCGCTAAGCTTGTCACAGTTACTTTGCCTTGCGATGCAAAGGAGACTGCTTGCTTGGAAGAGGATCCACTGCTTGCTGAGGAGCATATGAAGATAGAAGAGAGTACTGAAAATAAGGAACCTGATGAAGTGCAGCAAGGCTCTTATATTGAAAACTTGATTAGTTCACCAGAGATAAGTCCACCCGATAAGGAAGTCAGTCGGGAAGAAGATAGCCAGCAGGGAGAAGATAACCAACAGCTCAGATATGATTCGAAAACGGTGTGGAATGACAGCGCAAGtGCTAAGGATCAAGCAACTACTCCAAAGCGTACGCGCAGTCAAACAGCAAGAGCTAAAATGGAAAAGCAGACATGCACCTCCAGTATGCACAACGAAACAGGCGTGGATGATATTGAAAAGCCCAACCAACGCAACCGCCGGAAAGGAAATCTAAGCTGTCCGCACTGCAACAAGTCATTCGACCGGCCCTATCGTTTGAGGCGCCATGCTGGCGTCCACGCTCAATCGCGGGCATTTCAATGTGATATCTGCAAATATCGTTTCTCCACAGTTAATCAGTTGGCCCGCCACAAACTTTCACACGACGAAAATGCTCAAGCGCGGCGAATACCGCCACCTGAAGGATACAAATGTGCAGAGTGTCCACGTCGTTTTGAAAAATGCGAATCACTTTACGCGCACATACAGAGCCATCGAAAAGCCGATCCCAGTCAAGCATTCAAATGCGATATTTGCTCCAAGGAATTTCGCACATTCACTTCACTCACTAAACATACTCGTATACATCCCGAGAATCAGAACTTCAAGTGTACACAATGTGAGAAATCGTTCACCTTGAAGGCGCACCTCATCGAGCACATGAATAAACATAACGGTTTAAAACCATTTGTGTGCATCTACTGCAACAAAGCATTTCATCAGAACGGCACACTAAAGGAACATCAACGCATTCACACCGGCGAGAAGCCGTTCTTATGTTCACAATGTGGGAAGTCCTTTAAAAATGCCAGCAACATGCGTCAGCATCTGCTGCGTCACTCCGGCGAAAGACGCTATCAGTGTCCTGAGTGTCCCAGCAAATTCGCCTGTCAGTCGGATCAAATCAAACACATGTCCACGCACCGTACCGTCAAGCCGCACATCTGCGACATCTGCGGCTCGAGCTTTACACGTTCCTACACGCTAACCAAACACAAATACATTCACACCGGTGAGCGACCATACAAGTGCGAGGAGTGCAACATGACGTTTGTTTTCATCGATCATATGCGACGCCACATGAGAACGCATACAGGCGAAAAACCGTACAAATGTAAATTCTGCGATCGTGCTTATGCCGAGAGCGGCGACTTAAACAAACACCTGCGATCGCATGTGGGCGTGAAAACCTACATATGCGATCAGTGTCCAGAATCATTCAAATACCAGCTAGAGCTACGTGAACACCAGCGACAGCACTTCAAGGAAAAACAGGCTGCTCTAGAGCTGATTGAACCAAAAgcagaaatttaa
Protein Sequence: MDTSSLASVKRMCRTCMIQDQKFHSIFDYADKPLKIFEMLSTTTPQLLILNSDELPKQICVACLNKLMIAYGFQQMCINSEKHFRRMLAAKLVTVTLPCDAKETACLEEDPLLAEEHMKIEESTENKEPDEVQQGSYIENLISSPEISPPDKEVSREEDSQQGEDNQQLRYDSKTVWNDSASAKDQATTPKRTRSQTARAKMEKQTCTSSMHNETGVDDIEKPNQRNRRKGNLSCPHCNKSFDRPYRLRRHAGVHAQSRAFQCDICKYRFSTVNQLARHKLSHDENAQARRIPPPEGYKCAECPRRFEKCESLYAHIQSHRKADPSQAFKCDICSKEFRTFTSLTKHTRIHPENQNFKCTQCEKSFTLKAHLIEHMNKHNGLKPFVCIYCNKAFHQNGTLKEHQRIHTGEKPFLCSQCGKSFKNASNMRQHLLRHSGERRYQCPECPSKFACQSDQIKHMSTHRTVKPHICDICGSSFTRSYTLTKHKYIHTGERPYKCEECNMTFVFIDHMRRHMRTHTGEKPYKCKFCDRAYAESGDLNKHLRSHVGVKTYICDQCPESFKYQLELREHQRQHFKEKQAALELIEPKAEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01023226;
90% Identity: iTF_01023226;
80% Identity: -