Mtes018562.1
Basic Information
- Insect
- Myopa tessellatipennis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_943737955.2
- Location
- OX031315.1:54860086-54862917[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-91 8.4e-87 292.4 36.0 1 299 180 463 180 464 0.91 2 2 0.19 3.9e+03 -2.0 2.7 136 159 492 515 465 537 0.43
Sequence Information
- Coding Sequence
- ATGTCTGAAGTGGTAGTTGATCAAAAGCCTCATGAATCTCCAGaggaaaaatacaataataacaacaacagcaaagaagCAACAATACACCAGACGGTATACAATTCAAATGAATATGATGAAATCGGCGAAGAATTCAACTTCAATGAGAGCGATTTGGAAGAGGAATTCGAAGACTGCAATAGTGTTGCCAATTCAAATCATTCTGATAACGACCGGTTcacagttacaacaacaaaatcaccTGGAGTTttaccaacaacaataccgCCAACTACCACTACAGCTACAAACTCGATTACCAAATCAGCAGCCACTGAAATTGGTACCTCGCTCGATGACGTAATTGTGAAAAAcgttaacaaaacaaaatatcaaaataatgACGAACCGAATCGAAATGTTGCCTTGAATCCAACAGTAGTGAGTTCGGAAAATGAACATTTGGTTGgaaatgatgacgatgacgacgactaTTACAGCGATGACCCCGAGGATGAGTTGATTGTGCAATTTTTGGGAGAGGCAAATCTAATTGCTGAAGCGCGCCTCTCGGCTCGCAGACAAGCTCGCTCAGAAGCGCGTCAGATACGAACGCTTGAACTGGAGAGACAACAGAAGGCTCAAGAGCATAATGCAGATCGAGTCTTTGACATGCATACCACGCCTGCTTTGGAACCATTATCGAGAACACGCCTGGCAAATGGCAGGAGAGCCAGCACAATGTCGTCACATCGCAGCAGTGAGGATTCATTGGAGGAAGAAGGACGCCACTTCGCCGATCCGAAGGAAGAACTAAAGGATGCTGAGGAACGTTTTCGCAAAGCAATGATTGCTAACGCTCAGCTGGACAACGAGCGTGCATCGCAGAGCTATCAAATTCAGCACTTGAAGGATCAGTTGGAGGAAATCGGAGAAGCGAACATGCAGCTGCAACGCGAACTTAAAGAGAAAACTCGCGATTGCAATAGAAAGCAACGAAATCTGGATAAACTAAGTGACGAATTGAAGCTGGTGCAAGGCCAGCTGAGCGAACGTGACGCCTTAATCGCGGAACAAGGTTTGGTCATAGTGGCTGTGGAAAACGACGATGCAACGGATGCCAAGCGAACTCTCATCTCTGCAGAGAATGTGCAACTTTTGAGTTCAGTGCAAGGTTCTTTAGATGTGCGACTTAAACGATTCAATGACGAGAAACAAACTCTCAGTGAGGAGATATATCGTTTGAAGTCAGACTTAGAAGAGAAAAAATCCAGAGACACTGAAGCACTTCACAAAAAAGATCTTGTGCAATCGTCAGAAGAATGCGAAGAATCCGAAGTCCAGAAAGCCAATAAAATCATTTCGGGTTACAAATTTCGATTACAAAAGGCCGAGCAGGACATTTGCCATCTGGAAGCAAATCTAGCACAATCTGAGACGCAGTTGTTGCAATATAAAAGCGCTGTAGAAGCTGCAGAAAATGCGGAAGCCGAGTTAAAAGGCGAGCGGAGAAAATTACAGCGAGAGAATGTAGAGGTCACCGAACGCTTCGAAGAACTAGAAACATCCTACAATCATCTACTAAAAAGACtagaacaattaaaaaacgCTGAAGGTGCGCTACTCAAAGATCTGTAA
- Protein Sequence
- MSEVVVDQKPHESPEEKYNNNNNSKEATIHQTVYNSNEYDEIGEEFNFNESDLEEEFEDCNSVANSNHSDNDRFTVTTTKSPGVLPTTIPPTTTTATNSITKSAATEIGTSLDDVIVKNVNKTKYQNNDEPNRNVALNPTVVSSENEHLVGNDDDDDDYYSDDPEDELIVQFLGEANLIAEARLSARRQARSEARQIRTLELERQQKAQEHNADRVFDMHTTPALEPLSRTRLANGRRASTMSSHRSSEDSLEEEGRHFADPKEELKDAEERFRKAMIANAQLDNERASQSYQIQHLKDQLEEIGEANMQLQRELKEKTRDCNRKQRNLDKLSDELKLVQGQLSERDALIAEQGLVIVAVENDDATDAKRTLISAENVQLLSSVQGSLDVRLKRFNDEKQTLSEEIYRLKSDLEEKKSRDTEALHKKDLVQSSEECEESEVQKANKIISGYKFRLQKAEQDICHLEANLAQSETQLLQYKSAVEAAENAEAELKGERRKLQRENVEVTERFEELETSYNHLLKRLEQLKNAEGALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -