Mtes006103.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Myopa tessellatipennis
Gene Symbol
PAXBP1
Assembly
GCA_943737955.2
Location
OX031314.1:44160217-44165204[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-32 2.8e-28 100.4 1.0 4 272 641 848 638 850 0.94

Sequence Information

Coding Sequence
ATGTCATTGTTTCGTAAAccgaaaaaaattcaaagacGCGTGTTCTCCAGTACTTTGGACGATGATGAAGACACAAATGGGATTAAAGATGAGGGTGGCTGCATGCTGGACGAAGACTTGGTGCCGCCACCGCCGCCAGCGATTAGTTTCAGCAAAAGGTCGGTAAGGAAAGATAAAGCAAAGGACAACAAACAGAAATCGAACAAGATTTTCGATGCTGGCGCAGAGGGCAAAAGTACAAATTCAAAGGCACTCTTAAGTTTTGCTGATGATGAGGAGGACTCTGAGGTATTTCAAGTGCGCAAATCTTCGCAAAGCAAGAAAATGATGCGTATGCTGGATAAAGAGCGCCGCAAAAAGAAGCGTTCAGAACGCGATGATGGTAATATGGAAGTGGAGGCAGACGATAATTGGCGCAGTAGCGATGCAACTTATTTAGGTTCAACTTCAAGCGAAAGAAGCAGCACAACAGCGGGTagtaaatgtaataaaaacacaacaacgtcgtcgtcgtcttcatctaAAACGACTTCTTCTGGTTCAGTTTCAATTGAttgtaataaaagtaaaaaatcaGATAGTATCCAAACAGAAATTCGCACAGACGACTTTGTGCTTGTGGTAAAGAAATCGGAATCCGATCTCATTCTAAATGGACGTGATGCTGTCTGTGCTGGTCGCGATGATTTGTCTGATGAAGAATTCGAATATAAAACATCCAGTGATATCGATGAACATGATCGGCGACATCGTTTCTCTAAGCCAGAGCACTTGAAAAAAATGCTGGAGAGCGGTTCCATTCCAGACGCAGCAATGATACATGCAGCGCGCAAACGCAGACAAAAAGCGCGAGAACAAAGTGATTTCATACCCGTGGAGGAACCCAAAGAGGTACCCAAACGGGGTAGTCGATTGGCGCGTGAAGATGTCGAAGGTGAAAACAGTGACGATGAGGAACGTGTTGATATGAACGCCATCAGTGGAGTGAAGGAGCTCGAAGAAAGACGCGAACAATTTTATTCCGTTGAGCATGATTCATCTGATGAAGATTCTGATCTTGAGACTAACGATTGGGAAGCTCAACAAATACGCAAGGGCGTTACGGGAGCGCAGTTGGTGACAGCGCAGCAGGAGTCGGTGCTGTCGCGCTTCATTATCAAGTCTGTAGCAGGTGGTGCCGTTGATTATGGCAAAACACCACAGTCAACATTCACGTTGCTCGAACAAGCGTACGCGAAGAGTTCTCTAGAAAAGCCACAACAGCTGTTGGCGACCACAAAGCCCAAAAAAGACAAAGCTAAAATGCAAACGTTAAGATCACCGCCGGAAATTAAGCATGCGATCAGCATGAGaTTGACTAAATTGAAGGAGCTGAATTCTCAACATATAGCTGATATTGAACGCATCACGAATGAGCTGAAATTGTTGCAATTGGAGCAAATGGATTGTACACAAAATGCACCAACAGCAGCGGCTAAATATCGTTTCTATCAGGAAGTCAAGTGCTATGTAGCCGACTTGATAGATTGTCTCAATGAAAAGacCGCTACAATTAATGACTTGGAAAAACTTACAATGCAAACTATATCGAAACATCAGATATCTTTAATTGAACGCAGACGACAAGATATGCGAGATCAGGCGAAAGAAATGGCCGAAGCGTTAAAACCTTCGTCGTCGCGTCGTATAGCTGATAATGAGGAACACGTGCGTCGTGCGGAACGTGAAGGCAGGCGAACGCGACGGCGCTGTGAACGTGAAAAGAATGATATGTTGGCTGCCCATTTGGATGGTATGTCAAGTGATGATGAGATCTCTGATCATTACTTGGAACAATATAAATCGACGCTAGAACAACTAATGAGAGATGCTAATGAAATATTCGCTGACGTAAATGATGAGTTCTGTAAGGTTGAGTTAATTCTTATGAAATTCTATGCATGGCGTAAAACAGATATGGAATCTTATAAGGATGCTTTTGTTAGTCTATGTTTGCCAAAGTGTCTCGGGCCACTAATACGCTTGGAAATGCTCACCTGGTCACCCCTTCATGAAGACTACAAAGATATTGAGAAAATGAATTGGTATGCGGCGTGCATGTTGTACGCGTGGGGCGAAGAAGAAACTGAAGAGTCATTAAAACTAGATCCAGATGTTAATTTAGTGCCCacaataattgaaaaaattatattaccAAAACTAACTGAAATCGTTAACTTATGCTGGGATCCTCTATCGACAACTCAAACTTTACGCCTAATCGGCTGCATAAGTCGTTTAGGGCGTGATTTCCCCTTAAAAGAAACCACAAAATCaatgcaaaatttattcagTACAATTTTAGATAAAATGAAAGCAGCTTTGGAAAATGATGTCTTCATACCGATTTTTCCCAAACAAGTACAAGAAGCCAAGACATCGTTCTTTCAGCGCCAATTTTCCAGCGGActtaaattatttcgaaatataCTCAGTTGGCAGGGAATAGTAGCGGATAAGCCTTTGAGAGAGTTGGCAATAGCGTCATTATTGAATCGTTATTTGCTAATGGCAATGAGGGTTTGCACTGCTAATGATGCTTTAAGCAAAGCTTATGTTGTGGTTAATACTTTGCCGACAGCCTGGCTGCAGCCCGAATCCGAAACACTTCAGAATTTGAAGttatttataatgtttataaaGCAAACCCTAGAAACTTGTGATACAAAGAATCCACTGAATATGCAATCATTGGAGAGAGCCAAACAAATTCTTCAAAGACTTCATAGCTATAATAATTAG
Protein Sequence
MSLFRKPKKIQRRVFSSTLDDDEDTNGIKDEGGCMLDEDLVPPPPPAISFSKRSVRKDKAKDNKQKSNKIFDAGAEGKSTNSKALLSFADDEEDSEVFQVRKSSQSKKMMRMLDKERRKKKRSERDDGNMEVEADDNWRSSDATYLGSTSSERSSTTAGSKCNKNTTTSSSSSSKTTSSGSVSIDCNKSKKSDSIQTEIRTDDFVLVVKKSESDLILNGRDAVCAGRDDLSDEEFEYKTSSDIDEHDRRHRFSKPEHLKKMLESGSIPDAAMIHAARKRRQKAREQSDFIPVEEPKEVPKRGSRLAREDVEGENSDDEERVDMNAISGVKELEERREQFYSVEHDSSDEDSDLETNDWEAQQIRKGVTGAQLVTAQQESVLSRFIIKSVAGGAVDYGKTPQSTFTLLEQAYAKSSLEKPQQLLATTKPKKDKAKMQTLRSPPEIKHAISMRLTKLKELNSQHIADIERITNELKLLQLEQMDCTQNAPTAAAKYRFYQEVKCYVADLIDCLNEKTATINDLEKLTMQTISKHQISLIERRRQDMRDQAKEMAEALKPSSSRRIADNEEHVRRAEREGRRTRRRCEREKNDMLAAHLDGMSSDDEISDHYLEQYKSTLEQLMRDANEIFADVNDEFCKVELILMKFYAWRKTDMESYKDAFVSLCLPKCLGPLIRLEMLTWSPLHEDYKDIEKMNWYAACMLYAWGEEETEESLKLDPDVNLVPTIIEKIILPKLTEIVNLCWDPLSTTQTLRLIGCISRLGRDFPLKETTKSMQNLFSTILDKMKAALENDVFIPIFPKQVQEAKTSFFQRQFSSGLKLFRNILSWQGIVADKPLRELAIASLLNRYLLMAMRVCTANDALSKAYVVVNTLPTAWLQPESETLQNLKLFIMFIKQTLETCDTKNPLNMQSLERAKQILQRLHSYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01426681; iTF_01181152; iTF_00366501;
90% Identity
-
80% Identity
-