Mtes033942.1
Basic Information
- Insect
- Myopa tessellatipennis
- Gene Symbol
- -
- Assembly
- GCA_943737955.2
- Location
- OX031317.1:26873608-26875092[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.8e-16 9.3e-13 48.8 0.0 2 44 301 343 300 344 0.96 2 3 0.0067 22 6.0 0.0 27 37 373 383 352 389 0.85 3 3 3.8e-18 1.3e-14 54.7 0.0 3 41 411 449 409 451 0.93
Sequence Information
- Coding Sequence
- atgaATCACTTGAAATGGATGGGGCACCAATCAACAATATATGACATACAGAAAAGCCTACGCAGTGATACAAATAGCTGTGAAGTGACATTGGTCGGTCGAGGCAATTCAGTGCGGGCACATCGGTTTATACTGTCTTCTTGTAGCGATCTGCTACGTAGCTTGCTGGTAGATGTGCCCATGGGGCACGAGTGCACCATTATGCTGCCGGACATCAAGGGCGGGCTGCTGGATAGCGTGCTcgctttcatttatttgggCGAGACATGCCTTCATTCTTCCAACTTGTCCGAGTTCCTCGAAGTCATCAATCATTTGGGAATTAAGTCTGCCATCAGTTTCGAGTGCAACACAGGTCTGATGCCAGCCGGTGGGCATTCTCCTCCCAAAGCGGTTAGTGTTATGCACATGCAACAAGACGAAATCATTGAGGAGGAACAAGTCATCGGATCACCGAAGTCAGAGgACCAAACAGTTCTTGATGGAAATGATCAACAAACTACGCGTGACCTGGAATTCCTAGATGTCTATAATGAGCCAGAACAGAAAATTACCTATTCCATAGAGCATATGGCGGCTACCACAGCTAATGAATTCATTTTAACAGAAAATTCTGGCACTTTTACACTCACACAGAATACAAAGATCGAGGATGCGGGTACTGCGGATAAAGTCGAAGAGCCcgaagatgatgatgttgatgacaCTGGGCACATGATGGAAGATTACAATAGTACAACCGGTGCAGTTCCATCTGATCCCATAATGGAAATTGACCACTCCAGCGAAGTAATGGCTCAGTCCGATCAACCCATTCACACCAAATTCATCAAGCCAATTAAAgttgaaaaacaacaacataatacCGGTATAAACGTTCTAAACGACAGTCAGATGCGTGATGAGAGCCTGGAGCTGGCAGTTCAAGGCGTCCTTAATGAGGGTATGAGTTTGCAAAAAGCAGCACAAAAATATCACATCTCTAAGACTGTGCTTTGGCGACGCGTTCGCAAACATCCAATGTATATGAAAACAACACGCGAAAATCCTATGTTGGAGGCGGCCTGCAATCGTCTTCGTAGTGGCGAATCCCTAAAAGTAATTAGCCAGGCTCTGGACATACCAATGTCTACACTGCATCGTCACAAAGTACGCCTCGCACAGCAAGGTCGCTTGCCCGACTACATTTCATTTAAGAAGCGTGGCTCCATTTCCAAAGAACAACTCAAGGAAAAGCTGGCGAAGGCTGTACAAGCGTGCCTCCATGAAGGAATGTCCCAAAACCACGCAGCCAATATGTACGACATACCTAAGAGCACACTGTGGCGACATCTACAGAAGCGTATGAATGATGCGCAAATGCAGGGATTGCTGGATGAAGAGGATGTCATCAAAGAGGAAATTATTTTGTCATGA
- Protein Sequence
- MNHLKWMGHQSTIYDIQKSLRSDTNSCEVTLVGRGNSVRAHRFILSSCSDLLRSLLVDVPMGHECTIMLPDIKGGLLDSVLAFIYLGETCLHSSNLSEFLEVINHLGIKSAISFECNTGLMPAGGHSPPKAVSVMHMQQDEIIEEEQVIGSPKSEDQTVLDGNDQQTTRDLEFLDVYNEPEQKITYSIEHMAATTANEFILTENSGTFTLTQNTKIEDAGTADKVEEPEDDDVDDTGHMMEDYNSTTGAVPSDPIMEIDHSSEVMAQSDQPIHTKFIKPIKVEKQQHNTGINVLNDSQMRDESLELAVQGVLNEGMSLQKAAQKYHISKTVLWRRVRKHPMYMKTTRENPMLEAACNRLRSGESLKVISQALDIPMSTLHRHKVRLAQQGRLPDYISFKKRGSISKEQLKEKLAKAVQACLHEGMSQNHAANMYDIPKSTLWRHLQKRMNDAQMQGLLDEEDVIKEEIILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01023182; iTF_01414881; iTF_01181289; iTF_01181071; iTF_01415158;
- 90% Identity
- iTF_01023182;
- 80% Identity
- iTF_01023182;