Mtes011017.1
Basic Information
- Insect
- Myopa tessellatipennis
- Gene Symbol
- -
- Assembly
- GCA_943737955.2
- Location
- OX031315.1:7748867-7756574[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.5e-11 1.5e-07 32.1 0.0 1 38 512 550 512 555 0.89 2 4 1.4e-13 4.7e-10 40.1 0.1 2 39 567 604 566 607 0.94 3 4 1.6e-17 5.5e-14 52.7 0.0 1 45 621 666 621 666 0.98 4 4 8.3e-20 2.8e-16 60.1 0.0 1 43 673 716 673 718 0.96
Sequence Information
- Coding Sequence
- ATGCagGGTCTCCTTCGTACTGCCGAACAGTTAAAAATCAAAGGTCTCTGTGAAACCGCCGAGAGCACCGACGACATCGCCGACGCTGCAACAGCCACAATCACGGTGTCCGAAAACATACAGCAGGCCGTCGTTGGCAACATTGTCAATGCTACGGTAGCCCAAGGCCAACCCTCGCCCACCACCGCAGGACACcaccaccagcaacagcatcaaaTCGCTGGGAATGCTGCCGTTTTGACCCACACACTTGCCAACGTCACTGGAGCAGGCACGCACACGCAGCAACTGGTAACAACCGGTGGGACGATTGCTAACGTTGTTGCCGCCACAGCTGTCAACactcagcagcagcaacaacagcaacttgTACGCAAGTCACGCATACGCAAGCGCTCTAAGTCACCCGATCTgcaacaccaccaacaacagcagcagcaccaacagGCGATTCTTatacaaaatcaaaatcaaggCTCCATCGTGAGCTTGCAGCAGACTTCGAGTGGTAACTATATACCGATTACCAGCGGTGGTCAAGCTTTGACAACAGCCGCGGCCGCCgctcatcaacagcaacaacaattggaCGATTCCGATAAACCGTCCTTGCAGAAAATCTGTAAAACCGAAGGGTCAGCAGCATCGTCGCCGGGTTCGTCCACGAATAATGCCGGCAGCGTAACAGTCTCAGCACCAGGAACAGCAATCGTCACACAAATAGTTGTAGCACGCGACGGCAAGGATAAGAATATGACAAGCTTAGGAATGGGCATGAATGGCGGCTTACTTGGAGTGCCGATGGGATTTTTAGATTTTGCTCCCGAACCACCAGCACCTTCAGCTACACCAGTTACCGTAACCGAACACGTTGATTTATCCTGCAACCCCAGCACCGACACCAGAGATTTATCAAATCCCACCGAACCGCTCGATATCGACAATCATCTTGCACAGCATATGATACAAAGGCTTGATCAATCACCAATGCATACCATACATCATCAGACTGGAGATGAGAGCAACTCAAATCTGGTGCAACACATTAAAAGCGAGGTGATTGAGGttaagcagcagcagcagcaacaacaacagcaacaacaacaacaacagcagcaccatcagACACATCAACTGCATACACAGCAACAAATATCACAGGGACAATCGCcgcatcagcagcaacaacagcagcagcaactgcatcaacaacagcaacaacatcaacaacatcaacaacaacaacaacaacaacaacagcaacaacaacacacgcATCAAGAAATAACCGGCGCTACTGTTATGGAGATCGATCCAAGTCAAATAAAACACGAACCTGGAATGATTATAACACCAGAAATTGTTAATATGATGACCACTGGACATATGGatATGTACAACTCCGACACCAGTGAGGATTCAATGATGATCGCCAACGGTTCACCCAACGACAATAACGAGCCTCATTACACCAATTTGGACCAACAACATGGTGGCGATAACAAAGGTCAGTTTAATGGTCCCAAAACTTGGACTCAAGATGATATGAATTCAGCTTTAGATGCTCTGAAGAATCAAAACATGAGTTTGACGAAAGCATCTGTAACTTATGGCATCCCATCGACCACGCTTTGGCAGCGAGCTCACCGCATGGGCATCGAAACGCCAAAGAAGGAAGGAGGCACGAAATCCTGGAATGAGGACTCGTTAAATAGCGCATTGGAAGCGCTTCGAACGGGACAGATTTCCGCGAATAAAGCATCCAAAGCGTATGGAATTCCGTCCTCAACACTGTATAAAATCGCTCGTCGCGAGGGTATCCGTTTGGCAGCACCATTCAATGCGGCGCCAACAACATGGACGCCGGAGGATTTGGAACGCGCCCTCGAGGCCATTCGAGCCGGTCACACGTCCGTCCAGAAGGCGAGCGCCGAATTTGGCATACCAACAGGAACTCTTTACGGACGCTGCAAACGCGAAGGCATCGAATTGTCACGCTCGAATCCGACGCCGTGGTCAGAAGATGCCATGAACGAGGCATTGAATTCTGTACGCGTTGGCCAGATGTCAATCAACCAGGCGGCGATTCATTACAATCTACCCTACAGTTCACTCTACGGACGCTTTAAGCGCGGTAAATACGATGTGACCAACACCAGCGGCACCTCGATTAATAACACCTCCGGCAACACATCTGGTAGCATTGAGATTATCGAGCACAGTCAAGAGAATTCGTTGCACATGTTTCAACAGCAGTTCCAGTATAGTCCTTCGCcacaccagcaacagcagccgcaacagcaacacacacCAACCCAGCAGCAACACATACAACACGTGGTGCATattcaacagcagcaacacacACCaacccagcagcaacatcaccaacagcaacaacatatcCAACACCAGCAGGATGTGGTGACATCAAGCAGTCAAGTGCAGCAACACGCGTCCCCGTCCGGACAGCAAATCCAGCAAATCTACCATCATCACAGTACACCGGAGAGGAGTTGA
- Protein Sequence
- MQGLLRTAEQLKIKGLCETAESTDDIADAATATITVSENIQQAVVGNIVNATVAQGQPSPTTAGHHHQQQHQIAGNAAVLTHTLANVTGAGTHTQQLVTTGGTIANVVAATAVNTQQQQQQQLVRKSRIRKRSKSPDLQHHQQQQQHQQAILIQNQNQGSIVSLQQTSSGNYIPITSGGQALTTAAAAAHQQQQQLDDSDKPSLQKICKTEGSAASSPGSSTNNAGSVTVSAPGTAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQHMIQRLDQSPMHTIHHQTGDESNSNLVQHIKSEVIEVKQQQQQQQQQQQQQQQHHQTHQLHTQQQISQGQSPHQQQQQQQQLHQQQQQHQQHQQQQQQQQQQQQHTHQEITGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSEDSMMIANGSPNDNNEPHYTNLDQQHGGDNKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVTNTSGTSINNTSGNTSGSIEIIEHSQENSLHMFQQQFQYSPSPHQQQQPQQQHTPTQQQHIQHVVHIQQQQHTPTQQQHHQQQQHIQHQQDVVTSSSQVQQHASPSGQQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01200830;
- 90% Identity
- -
- 80% Identity
- -