Basic Information

Insect: Mylabris variabilis
Gene Symbol: -
Assembly: GCA_037464815.1
Location: JAZBGW010000130.1:11585-17841[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.9e-05 0.0023 18.2 1.7 1 23 436 458 436 458 0.97

2 18 3.1e-05 0.0018 18.6 1.8 1 20 464 483 464 486 0.94

3 18 1.7e-05 0.001 19.3 0.8 1 23 492 514 492 514 0.98

4 18 5.4e-05 0.0032 17.8 4.4 1 21 520 540 520 542 0.95

5 18 3e-05 0.0018 18.6 4.6 1 23 548 570 548 570 0.99

6 18 2.9e-05 0.0017 18.6 5.3 1 23 576 598 576 598 0.97

7 18 4.9e-06 0.00029 21.1 7.2 1 23 604 626 604 626 0.97

8 18 1.1e-07 6.7e-06 26.2 2.7 1 23 632 654 632 654 0.98

9 18 8.3e-05 0.005 17.2 6.7 1 23 660 682 660 682 0.97

10 18 4.8e-05 0.0029 17.9 5.8 1 23 688 710 688 710 0.97

11 18 6.8e-07 4.1e-05 23.7 2.9 1 23 716 738 716 738 0.98

12 18 2.2e-06 0.00013 22.2 7.6 1 23 744 766 744 766 0.98

13 18 3.2e-05 0.0019 18.5 9.1 1 23 772 794 772 794 0.98

14 18 1.9e-05 0.0012 19.2 7.7 1 23 800 822 800 822 0.98

15 18 1.3e-05 0.00075 19.8 7.1 1 23 828 850 828 850 0.97

16 18 7.2e-05 0.0043 17.4 0.4 1 23 856 878 856 878 0.97

17 18 0.029 1.8 9.2 5.1 1 23 888 910 888 910 0.98

18 18 5.2e-06 0.00031 21.0 1.3 1 23 916 938 916 938 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.9e-05	0.0023	18.2	1.7	1	23	436	458	436	458	0.97
2	18	3.1e-05	0.0018	18.6	1.8	1	20	464	483	464	486	0.94
3	18	1.7e-05	0.001	19.3	0.8	1	23	492	514	492	514	0.98
4	18	5.4e-05	0.0032	17.8	4.4	1	21	520	540	520	542	0.95
5	18	3e-05	0.0018	18.6	4.6	1	23	548	570	548	570	0.99
6	18	2.9e-05	0.0017	18.6	5.3	1	23	576	598	576	598	0.97
7	18	4.9e-06	0.00029	21.1	7.2	1	23	604	626	604	626	0.97
8	18	1.1e-07	6.7e-06	26.2	2.7	1	23	632	654	632	654	0.98
9	18	8.3e-05	0.005	17.2	6.7	1	23	660	682	660	682	0.97
10	18	4.8e-05	0.0029	17.9	5.8	1	23	688	710	688	710	0.97
11	18	6.8e-07	4.1e-05	23.7	2.9	1	23	716	738	716	738	0.98
12	18	2.2e-06	0.00013	22.2	7.6	1	23	744	766	744	766	0.98
13	18	3.2e-05	0.0019	18.5	9.1	1	23	772	794	772	794	0.98
14	18	1.9e-05	0.0012	19.2	7.7	1	23	800	822	800	822	0.98
15	18	1.3e-05	0.00075	19.8	7.1	1	23	828	850	828	850	0.97
16	18	7.2e-05	0.0043	17.4	0.4	1	23	856	878	856	878	0.97
17	18	0.029	1.8	9.2	5.1	1	23	888	910	888	910	0.98
18	18	5.2e-06	0.00031	21.0	1.3	1	23	916	938	916	938	0.96

Sequence Information

Coding Sequence: ATGAATAATAGTGATCCTAGTGCCCTTACAGGCGGCCACAATGCCGAAACAAACGagGCAACAACCCAACGACCCCCACCTACAACCTCAATCCCAACTGATCTGCGTGTAAATACAACAGCTTTAAATGCAGTTGCATTAAGTAGTGTCGCAAAATATTGggtattaacaaatttattaccTGGACCATTACCGCAAGTATCTGTTTATGGTTTGCCAGGAACAGGACGTGTTGATAATCAAGGCAAAATATCGCAAgAAGTGATGATGGGCCAACATACACCAGGATTATTACCAACTGATCCATTATTGTTACAACAACACTCACAAATACCGGTTAGTATAGCAACAACACAAGGTGTTGCGAATTTATCGATACCAACTAGTGCCAtgcatttagaaaataatcatcaaaatcatTCAACATTAACAAGCCATCAACAGAATGATAATTTATCTGTATCTAATCAGAATCAAATGAATCGAGAGatgaatcatcaacaacaacaacaacaacaaaatcacaaccaacaacaaaatatgGTTCAAGTTCAAGTTCAAGATAATTTAGTATCAGTCATTGAAGATACAAAAGAACAAAAAGATATAATAGCAGCTCAATTAGCACATGCACAGCTACAGTTGAATGATAATCAACATTTAAATCAGCAAGCTTTAACTGTCCAACAATTGCAACATCTTCAAGTCCAACAAGTACTTGATAATGtgGTACGTATGGAAAATACAGTTGATAACAATCAACAAAACCATTCAAATAATGATCAGAATCAATTATctgataatttacaaattgtaaAAGATGAGAAAGCTatacaaaattgtaaattattatcaaatacaGGACAATTTGGTATACAAGACCataaaaatagtttaatgGATATACGTACAGCTGATggtaatattgtaaaaatatcaacaaatttacaaGAACAAGATTTAGCAAAAACTTTAGGTGTTGAAATGGTCCAAAATATGTATAAAGTTaatgttgatgatttaaatcaattattagcTTATCATGAAGTATTTGGTAAATTACAAGgtgaaataacaacaacaacaacaacaaatcaaaataatttattacaaaattcaacATCAACGAAcattaatttacaacaacatcaacaacaaccacaacaacaacaacaacaacagcagcaacaacaacaacaacagactacaacaacaaataatttaggAATTGTAACAAAAGATGAACAAGAAGCATCAACAAGTAATTTGGCAACTGATAATAATCCGACTGTAATCACTGGAACACATGTTTGTGATATATGtggtaaaatatttcaatttcgttatcaattaattgtacACAGACGATATCATACAGAAAGGAAACCATTCACATGTCAGGTGTGTGGTAAAGCATTTACAAATGCACAAGAATTAACAAGACATGGTAAATGTCATTTAGGTGGTAGTATGTTTACATGTGCTGTATGTTTTCATGTATTTGCTAATGCAGCATCATTAGAACGCCATATGAAACGTCATTCAACTGATAAACCATATAATTGTACAATATGTGGTAAATCATTTGCTAGAAAAGAACATTTAGATAATCATACACGTTGTCATACTGGTGAAACACCATATAGATGTCAATATTGTGCAAAAACATTTACAAGAAAAGAACATATGGTGAATCATGTTAGgaaacatacaggtgaaacACCACATCGttgtgaaatttgtaaaaaatcatttaCAAGAAAAGAACATTTTATGAATCATGTTATGTGGCATACTGGTGAAACACCACATCATTGTACAATTTGtggtaaaaaatatacaagaaAAGAACATTTAGCAAATCATATGCGTTCACATACAAATGATACACCGTTTCGTTGTGAAATTTGTGGTAAATCATTTACACGTAAAGAACATTTTACAAATCACATTATGTGGCATACAGGTGAAACACCACATCGTTGTGATTTTTGTTCGAAAACATTTACACGTAAAgaacatttattaaatcatgtaCGACAACATACTGGTGAATCACCGCATCGTTGTGGTTTCTGTTCAAAATCGTTTACACGTAAAgaacatttaataaatcatGTACGTCAACATACTGGTGAAACACCATTTAGATGTCAGTATTGTCCAAAAGCATTTACACGTAAAGATCATCTAGTTAATCATGTTAGACAACATACAGGTGAATCACCACATAAATGTACATATTGTTCAAAATCATTTACAAGAAAAGaacatttaaataatcatATACGTCAACATACTGGCGAATCACCGCATCGTTGTCATTTCTGTTCGAAATCATTTACACGTAAAGAACATTTAACAAATCATGTACGTATCCATACTGGTGAATCACCGCATCGTTGTGAATTCTGTCAAAAAACATTTACACGTAAGGAACATTTAACAAATCATTTACGTCAACATACAGGTGAGACACAACATTGTTGTAATGTATGTTCGAAACCATTTACAAGAAAAgaacatttaataaatcatatGCGTTCACACACTGGTGAACGTCCATTTGCATGTAATGAATGTGGTAAATCATTTCCATTAAaaggtaatttattatttcatcaaCGTTCACATAATAAAGGTGCACAAGCCGATCGTCCATTTCGTTGTGATTTATGTGATAAAGATTTTATGTGTAAAGGACATTTAGTATCACATCGTAGATCACATAGTGGTGAACGGCCGCATGCATGTCCTGATTGTGGTAAAACATTTGTTGAAAAAGGTAATATGTTGAGACATTTCCGTAAACATACAGTTGAAAATGGACAACAACAgggtaataacaacaataataataataacaatagtggtaataatagtggtggtaatactaataataataataataataatgaacaacaaacaaataatccacaacaaattttaacaacaGCATCAACACCAgtatcaacaacaattgtattaaataataataacaataataatagtacgaATTTACAAATACcacaagttggtcaaaatcaacaagcaacaacaacaaatattgttaATCAATCAACACATTTACCAACACATCCAGCTAATAATCATCCAGTTGTTGTACCAACTGCTAATGGTAATGTTTTAACTACGTATTAA
Protein Sequence: MNNSDPSALTGGHNAETNEATTQRPPPTTSIPTDLRVNTTALNAVALSSVAKYWVLTNLLPGPLPQVSVYGLPGTGRVDNQGKISQEVMMGQHTPGLLPTDPLLLQQHSQIPVSIATTQGVANLSIPTSAMHLENNHQNHSTLTSHQQNDNLSVSNQNQMNREMNHQQQQQQQNHNQQQNMVQVQVQDNLVSVIEDTKEQKDIIAAQLAHAQLQLNDNQHLNQQALTVQQLQHLQVQQVLDNVVRMENTVDNNQQNHSNNDQNQLSDNLQIVKDEKAIQNCKLLSNTGQFGIQDHKNSLMDIRTADGNIVKISTNLQEQDLAKTLGVEMVQNMYKVNVDDLNQLLAYHEVFGKLQGEITTTTTTNQNNLLQNSTSTNINLQQHQQQPQQQQQQQQQQQQQQTTTTNNLGIVTKDEQEASTSNLATDNNPTVITGTHVCDICGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFTNAQELTRHGKCHLGGSMFTCAVCFHVFANAASLERHMKRHSTDKPYNCTICGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLINHVRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCTYCSKSFTRKEHLNNHIRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETQHCCNVCSKPFTRKEHLINHMRSHTGERPFACNECGKSFPLKGNLLFHQRSHNKGAQADRPFRCDLCDKDFMCKGHLVSHRRSHSGERPHACPDCGKTFVEKGNMLRHFRKHTVENGQQQGNNNNNNNNNSGNNSGGNTNNNNNNNEQQTNNPQQILTTASTPVSTTIVLNNNNNNNSTNLQIPQVGQNQQATTTNIVNQSTHLPTHPANNHPVVVPTANGNVLTTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00167784;
90% Identity: iTF_00929754;
80% Identity: -