Mvar012225.1
Basic Information
- Insect
- Mylabris variabilis
- Gene Symbol
- tfip11
- Assembly
- GCA_037464815.1
- Location
- JAZBGW010012101.1:1-3465[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4e-34 2.4e-30 106.1 0.5 14 122 2 118 1 122 0.93 2 2 3.3e-17 1.4e-13 51.0 0.1 192 241 145 195 142 195 0.97
Sequence Information
- Coding Sequence
- GCTAATCATTACGAAGAATATGTACGTTATGAATTAGGTGAATTAGCTCCAGGTCTTGTTGGTCCATTATTAACATCAGCATTAGCAAGTTGGTCACCATTAACATCACCAAATCAATATATCGATGTTTTTAAACAATGGAAGGATATTTTGGAGAAaccaaaacaacaattacaacaacaacaatttcaacGTGGGACATTAGAAGGTAATAATATGGGAATACAGCCATATGATAGTCTCTTATGGCATACTTGGATGCCTGTTATGAGAATTTGTGTTAGTTCATGGAATCCACGTGATTGTGATCctttaataacattaattgAAACATGGTCACCATTATTACCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCATCCATCAGATCCATCAGCTAAACCAATGTTGAAACCATGGCAACGTGTCTTACCGGATGGTACATTTTTGGCATTTCTATTAAAACATATTGtaccaaaattacaattgtGTATGCAACAATTTGTTATCAATCCACATCAACAACATCTcg
- Protein Sequence
- ANHYEEYVRYELGELAPGLVGPLLTSALASWSPLTSPNQYIDVFKQWKDILEKPKQQLQQQQFQRGTLEGNNMGIQPYDSLLWHTWMPVMRICVSSWNPRDCDPLITLIETWSPLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXHPSDPSAKPMLKPWQRVLPDGTFLAFLLKHIVPKLQLCMQQFVINPHQQHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -