Basic Information

Gene Symbol
Trerf1
Assembly
GCA_037464815.1
Location
JAZBGW010002177.1:4640-12273[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.6e-13 6.6e-10 38.9 0.2 2 46 950 994 949 994 0.96

Sequence Information

Coding Sequence
ATGTGGGTGAAATTCGTCGTCAGTAATCCTAGTAATAACgGCGATAATGGCGGCAATAATGATGGTCTCACTAAGCAACAATTAGATTTAATCCATCACATAATGGAACAAACTCAACGACAATCTCAATCGGTTAATAAAGCAACAACAAAACCCACTTCGAAGCCAGTCAATAAAACACCTGTGAAAGTTCAAAGAATATGGACGTCAACGACGCAACAGACTTCATCAAACAAAACAAGTGGAAGCGCTACGAGTCCGCAGGCGAAAGTTACAACAACCACCCCATCAACATCCCCGGCTGCTACCTCATCATCCGCTGGCAGCACCGCCAacgccgccgccaccaccgcCACTAATATTACAAATAACAAAGCCGAACCGAAACCGGTTGAATGCAATTTATGccatagaaaatttaaaaatatcccAGCCCTAAATGGTCATATGAGGCTGCATGGGGGCTATTTCAAAAAGGATTCTGAAAATAAAAAGTGTGAGAAAAAGGATGTTAACGGACCACCTTTGCAAACAGCTTCAGTGAGTGTTCGAGCTTTGATTGAAGAGAAAATCATCAATAAGCGGATTACAAATCCACAGTCAACGAACAACATCGGCGACACTGACAATACGAAACCATCAGCGCCACCATTGTTTCCATTAACAGTGCATTCCTCAGTAAATTCAAATGATTTAGATACAAAAATTACGTCGTTTGTTGTTCCGgcagcaccaccaccaccaccaccaccatcatccaCACAACAAACAACAGAAAAAGCTAGAAGACATTCCGATGCAGAAGCTTTCAATAATACGTCTCGATCAGTAACagtgacaacaacaacatcaacaacaccaGCTACCAATCAACCAAGTACTCAGCAAAAAGCTGAAGCTCTAGCTGATCTTATATTGAAACGAGATAAAATGGCTGTTAAACGTACTACCTCTGATCCTGGACAATCCACATCGCAAATCATTCAATTCCAATCGAATGATTCGTTCACGTTAACTGGTGTTGCTTATCAATCAGAAGATGGAGAATATCTATCACCAAGTCTACAGGATGAGGTGTTTACACAAGTACAAGATACAATGCTTTTACAAGGAGTTGATCCTCATCAACTTGCATCGATTCAATTTCAAACAGAAGGCCTACTCCAAGACCaaaatgaacaacaacaattacaggATATCACTTTAGAAGATTATACAAATTTACAGGAAGCTGTAGTACAATCAAACCATTCGGTCAATCAAGAATTACAAGCAGTTCTTGATTCACCTCTACCTGAAAGTCTAGCTGAATTCAGTACGTTCCattcaacaacaaatctaGATATGCCATCACCATCCTATCAAACTCAATCACCTGCTCAATATACAGAATCACCGCACACATCTCTAACAGCTCAATCACCTCTACAAAGTCCTTTAATACGACACGATTCACCTGGTTTTGCCTATCCGACACCTCCTGCCAGCCATGAAGGTCATAGTCCATGTTTTGGTCAAAATACGCTCTTACCAATGGTCTCGCCGAAACAAGAATTCGGCCAAGTAATGGAACGGGGTGTTGATGAACCACCACAGGCTTCTTCACCATTATCGGCAGCATTCTTCACATCAACCATGTCTAGTTCTGCTGCTGTTGAAGAAGCACTAGAAGAAGTCCTACCTGGTGAAAGTATCCCCAATGATATTTATCCATTAACTAATTCACCAACACCACAATCTCCCTTATCAGTTGGTCTAACTCCAGTCCCGTCTCCATTGTCAAATATTGTCAGTACATCAGTACCATCACCACATCCCTCAACAACATTCACATCATCCCCAAATAATGTGTCATTTCCAATGTCACCACATTATACACTCCAATCACAAATGATGCCAAATTCAGACGATCCTTTATTGTCGAGTAGTCCTAAAGATTTTGTAACAAGAAAGAAATTCGAGTTCAATGGTGTTCCATTGAAAGTAATCAGCAATAATGGAATACTAGATTTGAACAGTGCGAATTTTGCCGGCATTCTTGTCGATACAAAtggtgaaattaaatttattcaaactGGCGGCAGTACGTTGCAAGCAAAGAACGTTCTCTTAACGAACACATCATTAGtacaaacaacaaatcaagACGAGAAAGACCAGAGATTCCATAAAGTTTTAAAGACTGTTACAATACCAACGAAACAAGTTATAACAAGGCCTAAAATAAACGACCAAAAGAAAGATGATAACAACGATGTATTTCTCAGTCCGACAACGATTCCAGCGAGTCCAGTTAAAGTTTCTAGAAAACGGCCTAGAACTGAACCGTTACAACTACCAGTTTTCCACCAATCGAAATTAAGAGCTACAAGAAGTAAACCACAAGGATTCGCCCGTTATACACCACAGCCAATATTAAATCCACAACGGCCTAGTACTGGATTATATGCAAATTTAAAACCGAAATCAGATGAAGATTCCAGTAATTGGAACAGTGATCCAATTCCAGAAAGTGATTCCACACCACATATAAACGTGGGACCACAATTCCAATGTAATATTCCTTCTTTTACATCATCTCCTAATCGACATAATCCTGAACCGACTTATGAGGATCTTCTATGGGATCCTGgtattatcaacaattgcaCTGATAATGAAgTTGACATGTACTTGGATTTCGCGTGCTGTGCCGCAGTTCCCGGTGGTGGACGGAATAAAGAATATGCCATGCATTTGTTGCATCTTTGTAGTGGAAATATACAcGAAGCAATGTTGAAATTGATGCAACCCTCGCCAGTTCTACCCTCCGAACATCCACTTTTAGGATATTCGTATAATGAAAGTGATAAATGGACATTAACAGAAACTGAAATTTTCCACAAAGCTCTAATGAAATACGAAAAAGACTTCAATAGCATTGCCAAAgaaattggaaccaaaacaataaaacaatgtgTACAGTTTTATTATGTTTGGAAGAAAGTCTGTATTGATGAATATCGCAAATTGAAACATCTCCGGGAACGGAGGAATAATCATTTGAAAGTAATGGAGAACGATATGGACGATAAACCTTATCCAGATGCCAAATTATTAGGGATTGTTGAAAGTGGTTCACCAATGCCAATCCAAGAAACAAGACATTTTTCGTGTGAATTTCCCGACTGTTCAGCTagtttcaattcacGTGCAGCTTTAAATGGCCATATACGCATACATGGGGGTACAGCCCGTAATTCACCAACCCCATCGAATTTAAATACGGATAAACGTGCCCCTATAGTAAGTTCATCTGTTTGCCATCCTGATTCAACTGAAGATTATCCTTGTAAGATATGCGGGAAGGTGtttacaaaaatcaaaagtcGTAGTGCCCATATGAAATCACATCGTCCACCGGATGCAGAACCGTTAAAACGACGTGAAAAAGAACAACCAACGTCATGTACAAGTTTGGAACTTTCCGTGCCAAGCCCATTTAGTAACACCTAG
Protein Sequence
MWVKFVVSNPSNNGDNGGNNDGLTKQQLDLIHHIMEQTQRQSQSVNKATTKPTSKPVNKTPVKVQRIWTSTTQQTSSNKTSGSATSPQAKVTTTTPSTSPAATSSSAGSTANAAATTATNITNNKAEPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSENKKCEKKDVNGPPLQTASVSVRALIEEKIINKRITNPQSTNNIGDTDNTKPSAPPLFPLTVHSSVNSNDLDTKITSFVVPAAPPPPPPPSSTQQTTEKARRHSDAEAFNNTSRSVTVTTTTSTTPATNQPSTQQKAEALADLILKRDKMAVKRTTSDPGQSTSQIIQFQSNDSFTLTGVAYQSEDGEYLSPSLQDEVFTQVQDTMLLQGVDPHQLASIQFQTEGLLQDQNEQQQLQDITLEDYTNLQEAVVQSNHSVNQELQAVLDSPLPESLAEFSTFHSTTNLDMPSPSYQTQSPAQYTESPHTSLTAQSPLQSPLIRHDSPGFAYPTPPASHEGHSPCFGQNTLLPMVSPKQEFGQVMERGVDEPPQASSPLSAAFFTSTMSSSAAVEEALEEVLPGESIPNDIYPLTNSPTPQSPLSVGLTPVPSPLSNIVSTSVPSPHPSTTFTSSPNNVSFPMSPHYTLQSQMMPNSDDPLLSSSPKDFVTRKKFEFNGVPLKVISNNGILDLNSANFAGILVDTNGEIKFIQTGGSTLQAKNVLLTNTSLVQTTNQDEKDQRFHKVLKTVTIPTKQVITRPKINDQKKDDNNDVFLSPTTIPASPVKVSRKRPRTEPLQLPVFHQSKLRATRSKPQGFARYTPQPILNPQRPSTGLYANLKPKSDEDSSNWNSDPIPESDSTPHINVGPQFQCNIPSFTSSPNRHNPEPTYEDLLWDPGIINNCTDNEVDMYLDFACCAAVPGGGRNKEYAMHLLHLCSGNIHEAMLKLMQPSPVLPSEHPLLGYSYNESDKWTLTETEIFHKALMKYEKDFNSIAKEIGTKTIKQCVQFYYVWKKVCIDEYRKLKHLRERRNNHLKVMENDMDDKPYPDAKLLGIVESGSPMPIQETRHFSCEFPDCSASFNSRAALNGHIRIHGGTARNSPTPSNLNTDKRAPIVSSSVCHPDSTEDYPCKICGKVFTKIKSRSAHMKSHRPPDAEPLKRREKEQPTSCTSLELSVPSPFSNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2