Mvar009844.1
Basic Information
- Insect
- Mylabris variabilis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_037464815.1
- Location
- JAZBGW010006793.1:1233-3383[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.6e-18 6.9e-15 54.4 0.0 1 44 11 55 11 56 0.94 2 2 1.1e-18 1e-15 57.1 0.0 1 43 399 442 399 444 0.95
Sequence Information
- Coding Sequence
- ATGTCAGCAGTGGCCAGTCGACGTACTTATACAGAAGATGAATTACAAGCAGCCTTAAGAGATATACAATCTGGTAAATTGGGTACAAGAAGGGCGGCTGTTATCTATGGTATACCTAGATCGACATTACGTAATAAAGTTTATAAATTGGCATTGGAAAGGGAACGTGAATCACATCTAAACAGTTCAACAACACCATTGAAATTGGATGAGGAGGAAGCAATGGATGATGATAAGGAATTATCAGGTGCTGAAGAAGAGAAAGAAGTTGAGAAGGCTTTACAGGCACCATTATGTGATATATTACGTTTATCGAATATGGAAATACCGGTGGATGTTATAAAGAATATTGTACAAAAAGGTAAAGATGGCCAAGAGAATTGGGGTGTTGAACATAGTGAATTAGGACCATatatacaaaatttgttattagCCTCACAGAATTTATTAACGAATCAAAAAACGTTAGATAGTACGATTTTAAGTAATGTTATGCCGGAATTTTTGAAACGTATCATTGTTGAAGAACAATCAAAACtatcattattacaacaaacacAATTGAATAATGGTGAAAATGAGAAATTGATGCGACCGAGTCCATCGAATTCGGTAACAAGTAATAAACCAGATCGTTTACGTTCCGAATCTGATATGGAAACAGATGAATCACCATCGAATGTGATATTAAAAATTCCGTCCTTCAAGCCGACATCAAGCAAGAATGGATGTGATCTATTTAATAGAAATCAAATGgaaacaaataatattgtaTCACCACCAATTATAACAAATGAATCAAATTCACCACCAATATTGTCAACGAAATTGACGATAAAAGATGTTAAAGATGTTATAGCCCAAAGTATTAGTCAGAAATTCCAACAGAACTTGGAGCCGGCTCGAAGGCCACcagtaccaccaccaccattaccaccaccaccaccatcattaaTGGAAATGGATTATAAACGGGGTACATATACGCCACCGTTAAGTGGTGGTATTTCTGTTATAAAAACACAAGATTTGACACGACCACCGTACCAACCACAACAAGTGAAACCTCAACCGAATCCGGTGTCAAatagtggtaataataataataataataataataataacaataataataattcgtcGCAAGCAGGTGGTAAAGGGACACGTCCGAAACGTGGTAAATATCGTAATTATGATAGAGACAGTTTAGTTGAAGCTGTTAGGGCTGTGCAACGCGGTGAAATGTCCGTACATAGAGCGGGTAGTTATTACGGTGTACCCCATTCAACATTAGAATATAAAGTGAAAGAGCGACATTTAATGCGACCGAGAAAACGTGACCCAAAACCGAATCCGGTTGATGAGAAAATTGCCAGTTTAAAACAGAACGATATTCGTACAACGcaagataaattaaaattaacaaataataataataataatggtggcagtaataacaataataatactaataataatactaataatagtGGTCCAATGAAACCACCACAGAAATTCCCACCAACATCACCAAATGGTATGAAATTACCAATATTTGGTGAAGCAGGGATAGCACCATTGGCTGGTTATAATCCGGCACCATTTCCATTTTGGCCACATCCAGGTTATCATATTCCTATTGATTTTGCTAggaattcaacaacaacaacaacaactccTCCATTCCCGCCAAATCCGGAATTTTTCGCATCGCAAATGAtgcaaaaattacaagaagaTTCGTCTAgaacaccaccaacaacaatagcaaTTACAACAgtaccatcaacaacaataataacaacaacaacaacaacaacaaatgcaATAATAACAACGCCAGCATTAGCGAAAAGTGCCCGCCAAATTGCTGAATCCTTATTAGATGGTACCGGTTCGAATGGTTCATTTTTAGATGGTATAATTCGATCGAGTTTAGAACAAGGTGTACCAACATTGGAAGAGAAATCAccaaaagaagagaaaaatgtAGCACCGGAGAATATGTCGAATAAAGCTCTATTGGAACAATTATGTAGAAATAGTCGATTAACACCGTTAACAAAACCGATATTAACCGAACCGAATAGTTCTGGTGATGAATCGTATAGGAAAGGTAGTAGTCCTTTAAATTTCTCATCAGGTAACTAA
- Protein Sequence
- MSAVASRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERESHLNSSTTPLKLDEEEAMDDDKELSGAEEEKEVEKALQAPLCDILRLSNMEIPVDVIKNIVQKGKDGQENWGVEHSELGPYIQNLLLASQNLLTNQKTLDSTILSNVMPEFLKRIIVEEQSKLSLLQQTQLNNGENEKLMRPSPSNSVTSNKPDRLRSESDMETDESPSNVILKIPSFKPTSSKNGCDLFNRNQMETNNIVSPPIITNESNSPPILSTKLTIKDVKDVIAQSISQKFQQNLEPARRPPVPPPPLPPPPPSLMEMDYKRGTYTPPLSGGISVIKTQDLTRPPYQPQQVKPQPNPVSNSGNNNNNNNNNNNNNNSSQAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDIRTTQDKLKLTNNNNNNGGSNNNNNTNNNTNNSGPMKPPQKFPPTSPNGMKLPIFGEAGIAPLAGYNPAPFPFWPHPGYHIPIDFARNSTTTTTTPPFPPNPEFFASQMMQKLQEDSSRTPPTTIAITTVPSTTIITTTTTTTNAIITTPALAKSARQIAESLLDGTGSNGSFLDGIIRSSLEQGVPTLEEKSPKEEKNVAPENMSNKALLEQLCRNSRLTPLTKPILTEPNSSGDESYRKGSSPLNFSSGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00929491;
- 90% Identity
- -
- 80% Identity
- -