Ltri002337.1
Basic Information
- Insect
- Lydus trimaculatus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_037414755.1
- Location
- JAZBGY010000231.1:869-3413[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-18 6.7e-15 54.2 0.0 1 44 11 55 11 56 0.94 2 2 7.9e-19 1e-15 56.8 0.0 1 43 392 435 392 437 0.95
Sequence Information
- Coding Sequence
- ATGTCAGCAGTGGCCAGTCGACGTACTTATACAGAAGATGAATTACAAGCAGCCTTAAGAGATATTCAATCTGGCAAATTGGGTACAAGAAGGGCAGCTGTTATATATGGTATACCTAGATCAACATTACGGAATAAAGTTTATAAGCTTGCATTAGAAAGGGAACGTGAATCACATTTAAATAGTTCCATAACAGCACcattaaaaatagaagaagaagaagtaatGGATGATGATAAGGAATTATCAGGTgctgaagaagaaaaagaagttGAGAAAGCATTGCAAGCACCATTATGTGATATATTACGTTTATCAAATATGGAAATACCGGTAGATGTTATAAAGAATGCTATGCAGAAAAGTAAAGATGGTGGCCAAGAGAATTGGGCTATTGAACATAGTGAATTAGGACcatatatacaaaatttattattagcttCACAGAAtctaataacaaatcaaaaagcTTTAGACAGTACTGTTTTAAGTAATGTTGTGCCGGAATTTTTAAAACGTATCATAACAGACGaccaattgaaaattcaacaacaaaacaatggTGAAACTGAGAAATTGATGAGACCAAGTCCATCAAATTCTGTAACAAGTAATAAACCAGATCGTGTACGATCTGAATCTGATATGGAGACAGATGAATCACCATCAAATGTGATATTAAAAATTCCGTCCTTCAAGCCGACATCAAGTAAGAATGGatgtgatttatttaatagaaatcaaaTGGAAACAAATAATATCGTATCACCACCGATTATAACAAATGAATCAAATTCACCACCAATTCTATCAGCAAAAATGACGATAAAAGATGTTAAAGATGTTATAGCTCAAAGTATTAGCCAGAAATTTCAACAGAATTTAGAGCCGGCTCGAAGGCCACCACCACCTCCGCAACCATCACTTATGGAAATGGATTATAAAAGAGGTACATATACACCACCATTAGGTGGTGGAATTTCTGTTATAAAAACTCAAGATTTAACACGTCCACCATATcagcaacaacaccaacaacaccagcagcagcagcaccaacatcatcaacaaaataaatctcAACCGAATACGTCAaatagtggtggtagtaattTGGCATCACAAGCAGGTGGTAAAGGGACACGTCCGAAACGTGGTAAATATCGTAATTATGATAGAGACAGTCTCGTCGAAGCTGTTCGGGCTGTGCAACGCGGTGAAATGTCTGTACATCGGGCGGGTAGTTATTACGGTGTACCCCATTCAACATTAGAGTATAAAGTGAAAGAACGACATTTAATGAGACCGAGAAAGCGCGATCCAAAGCCAAATCCTGTTGATGAAAAAATTGCCAGTTTAAAACAGAACGATATACGTAATTCACaagagaaattaaaaacaacaaataatagtgGTAATAATAGTAGTGGAGGGGGTCCAATGAAACCACCACAAAAATTCCCACCCACATCACCAAATGGTATGAAATTACCAATATTTGGTGAACCAGGAATGGCACCATTGGCTGGTTATAATGCTGCACCGTTTCCATTTTGGCCACATCCAGGTTATCACATTCCTATTGATTTTGCTAGGAAtccaacaacaccaccattCCCACCAAATCCTGAATTTTTCGCATCACAAATGATGCAGAAACTACAAGAGGATTCATCAAGAACACCACCAactacaacaaccaccaccacaacaacaacagcaatagcacctgcagcaacaacaacatcatcattaaccgtaaatcaaaatacaacatCACCGATTAATACAGCAACACCAGCATTAGCTAAAAGTGCCCGACAAATAGCTGAATCTTTATTAGATGGTGTAGCATCGAATGGTTCTTTCTTAGATGGAATTATTCGATCCAGTTTAGAACAAGGTGTACCAACACCTGAAGAAAAATCATCGAAAGAAGACAAAAATGTTGCACCTGAGAATATGTCGAATAAAGCTCTATTGGAACAGTTGTGTAGAAATAGTCGACTGACACCATTAACAAAACCAACATTAACAGAACCGAATAGTTCGGGGGATGAATCTTATAGAAAAGGTAGTAGTAGTCCCCTTAATTTCTCAGGAgcatCCAGAGAACAAGATAGTTCTCCTCTATTACATTACGAGCGTTCCGATTCGCTAACAAATCCAATTGGTTCTTCAAATGAACTACCGACAATTGAATTATCGAATGATTCAAATGAAGAGGATTCATCTGATAAGAAATCGTTAAAAGATAATGATGAACGATTAATGATGATAAGTcctctacaacaacaacaacaacaaccaccaccacgtATATATCTGAAGAAAGATCTGGCTAATCCAGATAATTTGCAACCTGAAATGCTGATGCGTTTTCGGGAATTATTACCGGATACAGAACGGAATGGCGTTAGCGATGGTGGTCTAACAGGAAGTGCCTCGGATAACGATGCGCCTCAAGACTGA
- Protein Sequence
- MSAVASRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERESHLNSSITAPLKIEEEEVMDDDKELSGAEEEKEVEKALQAPLCDILRLSNMEIPVDVIKNAMQKSKDGGQENWAIEHSELGPYIQNLLLASQNLITNQKALDSTVLSNVVPEFLKRIITDDQLKIQQQNNGETEKLMRPSPSNSVTSNKPDRVRSESDMETDESPSNVILKIPSFKPTSSKNGCDLFNRNQMETNNIVSPPIITNESNSPPILSAKMTIKDVKDVIAQSISQKFQQNLEPARRPPPPPQPSLMEMDYKRGTYTPPLGGGISVIKTQDLTRPPYQQQHQQHQQQQHQHHQQNKSQPNTSNSGGSNLASQAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDIRNSQEKLKTTNNSGNNSSGGGPMKPPQKFPPTSPNGMKLPIFGEPGMAPLAGYNAAPFPFWPHPGYHIPIDFARNPTTPPFPPNPEFFASQMMQKLQEDSSRTPPTTTTTTTTTTAIAPAATTTSSLTVNQNTTSPINTATPALAKSARQIAESLLDGVASNGSFLDGIIRSSLEQGVPTPEEKSSKEDKNVAPENMSNKALLEQLCRNSRLTPLTKPTLTEPNSSGDESYRKGSSSPLNFSGASREQDSSPLLHYERSDSLTNPIGSSNELPTIELSNDSNEEDSSDKKSLKDNDERLMMISPLQQQQQQPPPRIYLKKDLANPDNLQPEMLMRFRELLPDTERNGVSDGGLTGSASDNDAPQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01022128;
- 90% Identity
- -
- 80% Identity
- -