Basic Information

Gene Symbol
-
Assembly
GCA_034621355.1
Location
CM067884.1:3361072-3371175[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.11 4.2e+02 1.4 0.0 9 29 282 301 280 304 0.72
2 18 0.76 2.8e+03 -1.3 0.1 19 29 337 347 334 349 0.71
3 18 0.76 2.8e+03 -1.3 0.1 19 29 383 393 380 395 0.71
4 18 0.012 44 4.5 0.1 3 29 406 431 405 434 0.86
5 18 0.012 44 4.5 0.1 3 29 444 469 443 472 0.86
6 18 0.012 44 4.5 0.1 3 29 482 507 481 510 0.86
7 18 0.76 2.8e+03 -1.3 0.1 19 29 543 553 540 555 0.71
8 18 0.76 2.8e+03 -1.3 0.1 19 29 589 599 586 601 0.71
9 18 0.76 2.8e+03 -1.3 0.1 19 29 635 645 632 647 0.71
10 18 0.012 44 4.5 0.1 3 29 658 683 657 686 0.86
11 18 0.012 44 4.5 0.1 3 29 696 721 695 724 0.86
12 18 0.012 44 4.5 0.1 3 29 734 759 733 762 0.86
13 18 0.012 44 4.5 0.1 3 29 772 797 771 800 0.86
14 18 0.012 44 4.5 0.1 3 29 810 835 809 838 0.86
15 18 0.012 44 4.5 0.1 3 29 848 873 847 876 0.86
16 18 0.012 44 4.5 0.1 3 29 886 911 885 914 0.86
17 18 0.012 44 4.5 0.1 3 29 924 949 923 952 0.86
18 18 0.092 3.4e+02 1.6 0.2 1 11 993 1003 993 1005 0.91

Sequence Information

Coding Sequence
atgGATGAAGATGAGTTTAATTCAAATGACGCAGGAACTGAGGTGACCATTTTAGAATGCCGGACTTGTTTGCATGTAATGAGTCCAGACGCTATTTTATTCAACATTTTCGAAAAGTGGTCCCCACCTTGGGACGGGATGGCGGACACTATCGCTGAAGATATAGAGAAGCTTGCTAATATAAAGGTTCAGGAGTCAGATAGACATTCAAAAGTAATATGCAGGACTTGTTATGAGCTACTACACTCTGCTTGCACATTCACAACAGcagtgaaaataaataatgacatactACAACAcagATACCCTCCTGAGCCAGATATACCAGACATAGATGCAGCTTGGCCTAGACCAATACAAATAAGCAAATCTgttaatagtttaataaatgaaaactcTATGAACTTTGATATTAAACAAGAAGTTTTATCAGATGATGGATACACTGTTGAAAATGGTATATATGAGAATGGGGATAATATATCTGAGATGGACATCAAGGTTGAGCCTGAGGAAATGATTCATGATGATTTGAAGCAACCATCGGAGCAGATTATGaatgGGTCAATATCTTCTGACACATTTGAGATTGACATGACACAACATTTAACAAATGGAAGCAGTGCAGatcatttaataacaaaaataaaggaGGAACTGTTAAGTGAAGAGGAGACTGAACTGATGCAAAACGATCTACCGCTGGAATGTCTACTGTGTACTAAACACTTTAAAAGTGTCACTGGACTGAAGGCTCATGTAATAGCTCATCATTCATACAAATCTGTTAAGAGAAAGAATGACTGTTTGTCTCCTGAACGAAATAaagGTTTCCCAACGCCCACAGACCTGATGTTGCGCAGTGACGACAGTAAGAACGTGTGCTACGCGTGCAACGAGGCGTTCGACACGTTCGCTCTGCTGACCAAACACAGTCGCAAGTGTAAAGCGATCACCAGGCAACAGCACAAGAGACCGAAAACTCTGAACGATGTTATTAGTGACGACAGTAAGAACGTGTGCTACGCGTGCAACGAGGCGTTCGACACGTTCGCTCTGCTGACCAAACACAGTCGCAAGTGTAAAGCGATCACCAGGCAACAGCACAAGAGACCGAAAACTCTGAACGATGTTATTAGTGACGACAGTAAGAACGTGTGCTACGCGTGCAACGAGGCGTTCGACACGTTCGCTCTGCTGACCAAACACAGTCGCAAGTGTTTCCCAACGCCCACAGACCTGATGTTGCGCAGTGACGACAGTAAGAACGTGTGCTACGCGTGCAACGAGGCGTTCGACACGTTCGCTCTGCTGACCAAACACAGTCGCAAGTGTTTCCCAACGCCCACAGACCTGATGTTGCGCAGTGACGACAGTAAGAACGTGTGCTACGCGTGCAACGAGGCGTTCGACACGTTCGCTCTGCTGACCAAACACAGTCGCAAGTGTTTCCCAACGCCCACAGACCTGATGTTGCGCAGTGACGACAGTAAGAACGTGTGCTACGCGTGCAACGAGGCGTTCGACACGTTCGCTCTGCTGACCAAACACAGTCGCAAGTGTAAAGCGATCACCAGGCAACAGCACAAGAGACCGAAAACTCTGAACGATGTTATTAGTGACGACAGTAAGAACGTGTGCTACGCGTGCAACGAGGCGTTCGACACGTTCGCTCTGCTGACCAAACACAGTCGCAAGTGTAAAGCGATCACCAGGCAACAGCACAAGAGACCGAAAACTCTGAACGATGTTATTAGTGACGACAGTAAGAACGTGTGCTACGCGTGCAACGAGGCGTTCGACACGTTCGCTCTGCTGACCAAACACAGTCGCAAGTGTAAAGCGATCACCAGGCAACAGCACAAGAGACCGAAAACTCTGAACGATGTTATTAGTGACGACAGTAAGAACGTGTGCTACGCGTGCAACGAGGCGTTCGACACGTTCGCTCTGCTGACCAAACACAGTCGCAAGTGTTTCCCAACGCCCACAGACCTGATGTTGCGCAGTGACGACAGTAAGAACGTGTGCTACGCGTGCAACGAGGCGTTCGACACGTTCGCTCTGCTGACCAAACACAGTCGCAAGTGTTTCCCAACGCCCACAGACCTGATGTTGCGCAGTGACGACAGTAAGAACGTGTGCTACGCGTGCAACGAGGCGTTCGACACGTTCGCTCTGCTGACCAAACACAGTCGCAAGTGTTTCCCAACGCCCACAGACCTGATGTTGCGCAGTGACGACAGTAAGAACGTGTGCTACGCGTGCAACGAGGCGTTCGACACGTTCGCTCTGCTGACCAAACACAGTCGCAAGTGTTTCCCAACGCCCACAGACCTGATGTTGCGCAGTGACGACAGTAAGAACGTGTGCTACGCGTGCAACGAGGCGTTCGACACGTTCGCTCTGCTGACCAAACACAGTCGCAAGTGTTTCCCAACGCCCACAGACCTGATGTTGCGCAGTGACGACAGTAAGAACGTGTGCTACGCGTGCAACGAGGCGTTCGACACGTTCGCTCTGCTGACCAAACACAGTCGCAAGTGTTTCCCAACGCCCACAGACCTGATGTTGCGCAGTGACGACAGTAAGAACGTGTGCTACGCGTGCAACGAGGCGTTCGACACGTTCGCTCTGCTGACCAAACACAGTCGCAAGTGTTTCCCAACGCCCACAGACCTGATGTTGCGCAGTGACGACAGTAAGAACGTGTGCTACGCGTGCAACGAGGCGTTCGACACGTTCGCTCTGCTGACCAAACACAGTCGCAAGTGTTTCCCAACGCCCACAGACCTGATGTTGCGCAGTGACGACAGTAAGAACGTGTGCTACGCGTGCAACGAGGCGTTCGACACGTTCGCTCTGCTGACCAAACACAGTCGCAAGTGTAAGGCGATCACCAGGCAACAGCACAAGAGACCGAAAACTCTGAACGATGTTATTAGACCGCCACCACAAGACGAGCCGAAATTAAAATGCACCCAATGCGATGAAACTTTCACAGACATGTACTACGTGACCATACATCAAGAGATACACCATCCGACATCGACCGCTGAGAAAACAGACTTGCAACAGGACAAGGAAATGGAAACTGAAACACTGGAGAATATATTCAGTGAAAGTGGTGACTTATAg
Protein Sequence
MDEDEFNSNDAGTEVTILECRTCLHVMSPDAILFNIFEKWSPPWDGMADTIAEDIEKLANIKVQESDRHSKVICRTCYELLHSACTFTTAVKINNDILQHRYPPEPDIPDIDAAWPRPIQISKSVNSLINENSMNFDIKQEVLSDDGYTVENGIYENGDNISEMDIKVEPEEMIHDDLKQPSEQIMNGSISSDTFEIDMTQHLTNGSSADHLITKIKEELLSEEETELMQNDLPLECLLCTKHFKSVTGLKAHVIAHHSYKSVKRKNDCLSPERNKGFPTPTDLMLRSDDSKNVCYACNEAFDTFALLTKHSRKCKAITRQQHKRPKTLNDVISDDSKNVCYACNEAFDTFALLTKHSRKCKAITRQQHKRPKTLNDVISDDSKNVCYACNEAFDTFALLTKHSRKCFPTPTDLMLRSDDSKNVCYACNEAFDTFALLTKHSRKCFPTPTDLMLRSDDSKNVCYACNEAFDTFALLTKHSRKCFPTPTDLMLRSDDSKNVCYACNEAFDTFALLTKHSRKCKAITRQQHKRPKTLNDVISDDSKNVCYACNEAFDTFALLTKHSRKCKAITRQQHKRPKTLNDVISDDSKNVCYACNEAFDTFALLTKHSRKCKAITRQQHKRPKTLNDVISDDSKNVCYACNEAFDTFALLTKHSRKCFPTPTDLMLRSDDSKNVCYACNEAFDTFALLTKHSRKCFPTPTDLMLRSDDSKNVCYACNEAFDTFALLTKHSRKCFPTPTDLMLRSDDSKNVCYACNEAFDTFALLTKHSRKCFPTPTDLMLRSDDSKNVCYACNEAFDTFALLTKHSRKCFPTPTDLMLRSDDSKNVCYACNEAFDTFALLTKHSRKCFPTPTDLMLRSDDSKNVCYACNEAFDTFALLTKHSRKCFPTPTDLMLRSDDSKNVCYACNEAFDTFALLTKHSRKCFPTPTDLMLRSDDSKNVCYACNEAFDTFALLTKHSRKCKAITRQQHKRPKTLNDVIRPPPQDEPKLKCTQCDETFTDMYYVTIHQEIHHPTSTAEKTDLQQDKEMETETLENIFSESGDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01021663;
90% Identity
iTF_01021663;
80% Identity
iTF_01021663;