Basic Information

Insect: Mycalesis mineus
Gene Symbol: -
Assembly: GCA_034621355.1
Location: JAXAVZ010000166.1:694758-709124[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.056 3.9 8.8 2.6 1 23 22 45 22 45 0.97

2 14 0.61 42 5.6 2.8 1 12 52 63 52 74 0.85

3 14 8.1e-06 0.00056 20.9 0.5 2 23 79 101 78 101 0.93

4 14 4e-05 0.0028 18.7 1.2 1 23 107 129 107 129 0.97

5 14 4e-05 0.0028 18.7 1.2 1 23 135 157 135 157 0.97

6 14 4e-05 0.0028 18.7 1.2 1 23 163 185 163 185 0.97

7 14 4e-05 0.0028 18.7 1.2 1 23 191 213 191 213 0.97

8 14 0.0066 0.46 11.8 0.6 5 23 221 239 220 239 0.95

9 14 0.0066 0.46 11.8 0.6 5 23 249 267 248 267 0.95

10 14 0.014 0.94 10.8 1.5 3 21 283 301 282 306 0.93

11 14 0.0003 0.021 16.0 1.4 1 23 314 337 314 337 0.94

12 14 3.9e-05 0.0027 18.8 1.9 1 23 342 365 342 365 0.98

13 14 2.7e-06 0.00019 22.4 2.4 3 23 374 394 373 394 0.98

14 14 2.4e-06 0.00016 22.6 2.4 1 23 400 423 400 423 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.056	3.9	8.8	2.6	1	23	22	45	22	45	0.97
2	14	0.61	42	5.6	2.8	1	12	52	63	52	74	0.85
3	14	8.1e-06	0.00056	20.9	0.5	2	23	79	101	78	101	0.93
4	14	4e-05	0.0028	18.7	1.2	1	23	107	129	107	129	0.97
5	14	4e-05	0.0028	18.7	1.2	1	23	135	157	135	157	0.97
6	14	4e-05	0.0028	18.7	1.2	1	23	163	185	163	185	0.97
7	14	4e-05	0.0028	18.7	1.2	1	23	191	213	191	213	0.97
8	14	0.0066	0.46	11.8	0.6	5	23	221	239	220	239	0.95
9	14	0.0066	0.46	11.8	0.6	5	23	249	267	248	267	0.95
10	14	0.014	0.94	10.8	1.5	3	21	283	301	282	306	0.93
11	14	0.0003	0.021	16.0	1.4	1	23	314	337	314	337	0.94
12	14	3.9e-05	0.0027	18.8	1.9	1	23	342	365	342	365	0.98
13	14	2.7e-06	0.00019	22.4	2.4	3	23	374	394	373	394	0.98
14	14	2.4e-06	0.00016	22.6	2.4	1	23	400	423	400	423	0.96

Sequence Information

Coding Sequence: ATGCCGTACCATAGTGTCTTCCGTCGAAGCGTTTACCGCACGTACGGGAGGCATATGAAAagATACGAATGTGCGATCTGCCACAAGCGGGCCACTGACATCAAATCCATCCAGCAGCATCTACATACAAGACACCAGATATCGCTCAGGAAGTACAAGTGCAAGTGGTGTGGGAAGGTGTCCAAGTCCGTAGACACACATCGCTATCACTGCGACATGCACAAATCGCGCGTCCAATGCCCGCAGTGTGACAAGACCTTTAGCCACCGGGCCGGTCTCATGAATCACAGGCTAGCAGTTCACGAGGCTCAGAACCAGTTCCCTTGCACTCTCTGCGACAAAGTGTTCAGGTGGAAGACCAGTCTCAAGCGGCATTTGGAAAAACACAAGACTGAGAACCAGTTCCCTTGCACTCTCTGCGACAAAGTGTTCAGGTGGAAGACCAGTCTCAAGCGGCATTTGGAAAAACACAAGACTGAGAACCAGTTCCCTTGCACTCTCTGCGACAAAGTGTTCAGGTGGAAGACCAGTCTCAAGCGGCATTTGGAAAAACACAAGACTGAGAACCAGTTCCCTTGCACTCTCTGCGACAAAGTGTTCAGGTGGAAGACCAGTCTCAAGCGGCATTTGGAAAAACACAAGACTGAGAACCAGTTCACGCTCTGTGACAAAGTGTTCAGGTGGAAGACCAGTCTCAAGCGGCATTTGGAAAAACACAAGACTGAGAACCAGTTCCCTTTCACGCTCTGCGACAAAGTGTTCAGGTGGAAGACCAGTCTCAAGCGGCATTTGGAGAAACACAACACTGAGCAGGAAAGCAGCACGGTGCCCACAAACAAAGCGTACTGCGAGTCGTGTGACATCGGTTTTTCATCCGTCTGTTCGCTGCAGCGCCATCTCAGAAACAGCCTCAAACACGTCACCTACGACCAGCTCAAATTCATCTGCGATCACTGCGATCAGAGATACGTGGACAAGACCAAACTGCGAGACCATATAGAAGAGAAACATTTGTACAGAACCTTCGAGTGTCACATCTGCCATAAGcCGTCCAAGAACCGCGTAGGTCTGGAGCAGCACGTCCGCACGGTCCACATCGGGCGACCCAACACTAGGATATGCCACCATTGCGGGAAGGGATTTCCGaCCAATTTGCAGCTCGAGTCtcacatacgcacacacacagGTGAAAGACCGTTTATGTGTGAGTACTGTCCCGCTACGTTCTCGCAGCAGTCCAATCTATACAAGCACCATAGACAAGTACATTTAAACATGAAATCCAAGCGTTATCCATTATGTAAGAAAACGAAAGCTGACGGGAATCAAACCGCCGACCCTCAGCCACCATTCCCCATAGCGATAATGCAGTATATACCCGATAACGGATTTAGCTTTTAA
Protein Sequence: MPYHSVFRRSVYRTYGRHMKRYECAICHKRATDIKSIQQHLHTRHQISLRKYKCKWCGKVSKSVDTHRYHCDMHKSRVQCPQCDKTFSHRAGLMNHRLAVHEAQNQFPCTLCDKVFRWKTSLKRHLEKHKTENQFPCTLCDKVFRWKTSLKRHLEKHKTENQFPCTLCDKVFRWKTSLKRHLEKHKTENQFPCTLCDKVFRWKTSLKRHLEKHKTENQFTLCDKVFRWKTSLKRHLEKHKTENQFPFTLCDKVFRWKTSLKRHLEKHNTEQESSTVPTNKAYCESCDIGFSSVCSLQRHLRNSLKHVTYDQLKFICDHCDQRYVDKTKLRDHIEEKHLYRTFECHICHKPSKNRVGLEQHVRTVHIGRPNTRICHHCGKGFPTNLQLESHIRTHTGERPFMCEYCPATFSQQSNLYKHHRQVHLNMKSKRYPLCKKTKADGNQTADPQPPFPIAIMQYIPDNGFSF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01021887;
90% Identity: iTF_01021887;
80% Identity: iTF_01021887;