Basic Information

Insect: Mycalesis mineus
Gene Symbol: -
Assembly: GCA_034621355.1
Location: CM067898.1:12209015-12213664[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00082 0.057 14.6 0.1 3 23 217 237 216 237 0.97

2 13 0.00014 0.0095 17.0 3.7 1 23 247 269 247 269 0.99

3 13 9.2e-05 0.0064 17.6 0.1 2 23 295 316 294 316 0.96

4 13 0.00012 0.0082 17.2 1.9 1 23 338 360 338 360 0.99

5 13 0.0011 0.074 14.2 3.2 1 23 368 391 368 391 0.91

6 13 4.9e-06 0.00034 21.6 1.9 1 23 397 419 397 419 0.97

7 13 2.4e-05 0.0017 19.4 4.2 1 23 425 447 425 447 0.97

8 13 3.5e-07 2.4e-05 25.2 1.1 1 23 453 475 453 475 0.96

9 13 4e-05 0.0027 18.7 0.2 1 23 481 503 481 503 0.99

10 13 1.6e-07 1.1e-05 26.3 0.6 1 23 509 531 509 531 0.98

11 13 0.00021 0.015 16.5 0.6 1 23 537 559 537 559 0.98

12 13 8.1e-05 0.0056 17.8 4.1 1 21 565 585 565 587 0.96

13 13 0.00011 0.0075 17.4 0.7 1 23 593 615 593 615 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00082	0.057	14.6	0.1	3	23	217	237	216	237	0.97
2	13	0.00014	0.0095	17.0	3.7	1	23	247	269	247	269	0.99
3	13	9.2e-05	0.0064	17.6	0.1	2	23	295	316	294	316	0.96
4	13	0.00012	0.0082	17.2	1.9	1	23	338	360	338	360	0.99
5	13	0.0011	0.074	14.2	3.2	1	23	368	391	368	391	0.91
6	13	4.9e-06	0.00034	21.6	1.9	1	23	397	419	397	419	0.97
7	13	2.4e-05	0.0017	19.4	4.2	1	23	425	447	425	447	0.97
8	13	3.5e-07	2.4e-05	25.2	1.1	1	23	453	475	453	475	0.96
9	13	4e-05	0.0027	18.7	0.2	1	23	481	503	481	503	0.99
10	13	1.6e-07	1.1e-05	26.3	0.6	1	23	509	531	509	531	0.98
11	13	0.00021	0.015	16.5	0.6	1	23	537	559	537	559	0.98
12	13	8.1e-05	0.0056	17.8	4.1	1	21	565	585	565	587	0.96
13	13	0.00011	0.0075	17.4	0.7	1	23	593	615	593	615	0.96

Sequence Information

Coding Sequence: ATGGATAATACGCCAGGAAAAATTATATGCAGAACCTGTCTTACCGAGACTTCTGGTTATAGGTCTCTACTAGCCAAAGTGGATGGAGAAGAACGGACATTGCGTGAAGTTTTGTCTAATTTCACGAATATGGATATTTTGTTAAGTGATAAGTATCCCAAACAGGTTTGTTTCGAGTGCTATACGATGATATTCAAGGCTAATGAGTTTAAAAAGCGATGTTTACAGTCggaaacaatattaaaaaatggatTCCTATCCCATACTTTCGAAGAACTTATCAAACGGGAAATGGTCGGTACAGACCCaacaaatatatacaatacccaTATGAACAATAGTTTCGATAATTGCTCGAAAAATAATCTCCCAGCCACTGGCGAGATTGACATAACTGTGATGGAAAATTACTATAATACAACAGATAATGTAAAGGACAACCAATTTGTTAAAGAGGAACAAGATGATTTCTTACAGGATAGTATTGATGATTTGCAAGTAGATATAGTTCCTGACACTAGTTCTATTCAGAACATATTAAATGCAGGCATTGGTATTGATAACACAAAATTAAAAGGCAATaagagaaaattaaaaagcattGAAAAATCGGAATTTGATTCAGACACATATAAAATCATATCAGCGTGTGGGCTATGTGAAGAAGAATTCCCAGATTTCTCGCTCCTTCAAATTCATATGATGAAACATAAAGAAGAAAATTGTGATAATGTTAACTATCAATGTACAGTTTGCAAAAGAAACTACACAAACAAATTATCATACAAAACTCACATCAAAACACACAAAGAGAAAGTTAGAGTAAAACATAAGAAAACTAAaagtaatattgaaaataaaaatggtttGAATTTATTGCTAATATGCCCAAAATGTGGGGAAAATTTTGATACCATGGACTTATTTCAGTCACATATAAAAATTCACAAGGAAGAGGACAAAATGaatgatgttgataatattataaagttacagAATGAAGTAGAGAGGTACCAATGCTCCCTCTGCATGCGCAAGTTTGTGCGCAGGTCATCACTAGTTACTCATATAAAACGCCATGAAGACAAggcACAGATAAAATATACATGTAAAACTTGCAAGCGAGAGTTCCAGCACAAGGCTCATCTTGAGAACCATGTGGTGCTGGTGCACTCCAAGGAGAAAGGGTTTACTTGCGACACTTGTAACAAGAGCTTCTCCACCCAGGAGAGCCTTGAAAGCCATAAGGATCGCCACAAAGTGGACAGGAAACATGAATGCAAGGTTTGCGGTAAATGCTTTACAATGTTGTCGACCCTGACGGAGCACACCAAAATCCACACTGGGGAGAAACCGTATCTGTGCTCCGTGTGCGGGCGCGGGTTCAGCCAGAAGAACAACCTGAGCCAGCACATGCGCCGCCACCAGGGGCTCAAGCCCTTCAAATGTGACAGTTGTGAGAGAGGGTTCGTGTCCAAGGGTGAACTAGAGGCGCACGCTCGCAAGCACAGCGGCGCGCACCCCTTCGTGTGCGACGACTGCGGGGGAAGCTTCACCACCTCCAGCTCCTTGACTAAACACAGGAGGATACACACAGGGGAGCGCCCCTACGCCTGCGACCTATGCCCCATGAGATTCACAGCACTCAATACATTGAAGAACCACAGACGAACACACACCGGTGAGAAACCGTACCAATGCTCCCATTGTGAGAAGGCCTTTACACAGAGGAACGATCTAGTGTCGCACATACGGTGTCACACTGGCGAGAGACCGTATATATGCACTTGTTGTGGCCAGGCCTTTAGAAAGGCTTCGGCCTTGAAGGTGCATATCAAAGTGCATAGCAAAGACGGTATGGTCATGTAG
Protein Sequence: MDNTPGKIICRTCLTETSGYRSLLAKVDGEERTLREVLSNFTNMDILLSDKYPKQVCFECYTMIFKANEFKKRCLQSETILKNGFLSHTFEELIKREMVGTDPTNIYNTHMNNSFDNCSKNNLPATGEIDITVMENYYNTTDNVKDNQFVKEEQDDFLQDSIDDLQVDIVPDTSSIQNILNAGIGIDNTKLKGNKRKLKSIEKSEFDSDTYKIISACGLCEEEFPDFSLLQIHMMKHKEENCDNVNYQCTVCKRNYTNKLSYKTHIKTHKEKVRVKHKKTKSNIENKNGLNLLLICPKCGENFDTMDLFQSHIKIHKEEDKMNDVDNIIKLQNEVERYQCSLCMRKFVRRSSLVTHIKRHEDKAQIKYTCKTCKREFQHKAHLENHVVLVHSKEKGFTCDTCNKSFSTQESLESHKDRHKVDRKHECKVCGKCFTMLSTLTEHTKIHTGEKPYLCSVCGRGFSQKNNLSQHMRRHQGLKPFKCDSCERGFVSKGELEAHARKHSGAHPFVCDDCGGSFTTSSSLTKHRRIHTGERPYACDLCPMRFTALNTLKNHRRTHTGEKPYQCSHCEKAFTQRNDLVSHIRCHTGERPYICTCCGQAFRKASALKVHIKVHSKDGMVM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00205373;
90% Identity: -
80% Identity: -