Basic Information

Insect: Bicyclus anynana
Gene Symbol: -
Assembly: GCA_947172395.1
Location: OX359222.1:10411885-10417215[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0011 0.058 14.1 0.5 3 23 215 235 214 235 0.97

2 13 0.00033 0.018 15.7 2.6 1 23 245 267 245 267 0.99

3 13 2.8e-05 0.0015 19.0 0.7 2 23 293 314 292 314 0.96

4 13 0.00017 0.0093 16.6 2.0 1 23 337 359 337 359 0.99

5 13 0.0013 0.072 13.7 2.4 1 23 367 390 367 390 0.90

6 13 1.2e-05 0.00066 20.2 1.6 1 23 396 418 396 418 0.97

7 13 5.3e-05 0.0029 18.2 2.6 1 23 424 446 424 446 0.97

8 13 3e-07 1.7e-05 25.2 1.1 1 23 452 474 452 474 0.96

9 13 1.1e-05 0.00059 20.3 0.2 1 23 480 502 480 502 0.99

10 13 1.3e-07 7.3e-06 26.3 0.6 1 23 508 530 508 530 0.98

11 13 0.00018 0.01 16.5 0.6 1 23 536 558 536 558 0.98

12 13 7e-05 0.0038 17.8 4.1 1 21 564 584 564 586 0.96

13 13 9.4e-05 0.0051 17.4 0.7 1 23 592 614 592 614 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0011	0.058	14.1	0.5	3	23	215	235	214	235	0.97
2	13	0.00033	0.018	15.7	2.6	1	23	245	267	245	267	0.99
3	13	2.8e-05	0.0015	19.0	0.7	2	23	293	314	292	314	0.96
4	13	0.00017	0.0093	16.6	2.0	1	23	337	359	337	359	0.99
5	13	0.0013	0.072	13.7	2.4	1	23	367	390	367	390	0.90
6	13	1.2e-05	0.00066	20.2	1.6	1	23	396	418	396	418	0.97
7	13	5.3e-05	0.0029	18.2	2.6	1	23	424	446	424	446	0.97
8	13	3e-07	1.7e-05	25.2	1.1	1	23	452	474	452	474	0.96
9	13	1.1e-05	0.00059	20.3	0.2	1	23	480	502	480	502	0.99
10	13	1.3e-07	7.3e-06	26.3	0.6	1	23	508	530	508	530	0.98
11	13	0.00018	0.01	16.5	0.6	1	23	536	558	536	558	0.98
12	13	7e-05	0.0038	17.8	4.1	1	21	564	584	564	586	0.96
13	13	9.4e-05	0.0051	17.4	0.7	1	23	592	614	592	614	0.96

Sequence Information

Coding Sequence: ATGGATAGTATGCTGGGAAAGATCATATGCAGAACCTGTCTTACCGAGGCTTCCGGTTACAAGTCTTTACTAACAAAAATGGACGGAGAAGACCGAACCTTGCGGGAAGTTTTGTCTAATTTCACGAATATGGATATTTTGTTAAGCGATAAGTATCCCAAACAGGTTTGTTTCGAGTGCTATACGATGATATTCAAGGCTGATGAGTTCAAAAAGCGATGTTTACAGTCGGAAACCATATTAAAAAATGGTTTCCTATCCCACACTTTCGAAGAACTTATTAAACGCGAAATGGTTCATACTGATCACCCTACTGTCGGCAATACCCAAATGAACAACAGTTACGAAGTTTGCGTAACAAATAATCTCCCAGCCTCTGGTGAGATAGACATAACTGTTATGGAAAATTACTATAACACAACAGATAATCTTAAAAACGACATACAATTTGTTAAAGAGGAACAAGATGATTTTTTACACGACAGTATTGATGATTTACACGAGGATATGATTCCTGAGAGTGAGTCTGTCCAAAACATAGGCATAGTTATCAATAACACAGGTCTAAAAACCGATAAAAAAAAATTAAAAGGCATCGAAAAATCAGAATTTGGTCCAAACACTTACGATATCATATCAGCGTGTACATTATGTGAAGAAGAATTTCACGATTTCTCGCTTCTACAAGCTCACATGCTGTCACATAAAGAAAAAAACATTGACAATGTCGACTATCAATGTACAGTCTGCAAAAGCAACTTCACAAACAAACTATCATACAAAATTCACATAAAAACTCACAAAGAGAAAGTAAGAATGAAACACAAGAAAACAAAAAGTAACATTGAAAATAAAAATGGTTTGAATTTAATGTTAATTTGTCCAAAATGTGGGGAGAAGTTTACCAAAATGGATTTGTTTCAGTCACATTTGAAAACTCATAAAGAGGAGGACAAAATTGATGAAGTTGTTAATAATATTATAAAGTTACAGAATGAAGTACAGAGGTACCAATGTTCTCTGTGCATGCGCAAGTTTGCACGCAGGTCATCATTAGTTACTCATTTAAAACGACATGACGATAGGGCGCAGATTAAATTTCCATGTAAAACTTGCAAGAGAGAGTTCCAGCACAAGGCTCACCTGGAGAACCATGTGGTGCTGGTGCACTCCAAAGAGAAGGGCTTCACCTGCAACATCTGCAACAGGAGCTTCTCCACACAGGAGAGCCTGGACAGCCATAAGGATCGACACAAAGCAGATAGGAAACATGAATGCAAGGTCTGCAGTAAAAGCTTCACAATGCTGTCAACCCTGACGGAGCACACCAAGATCCACACCGGCGAGAAGCCGTACCTGTGCTCGGTGTGCGGCCGCGGGTTCAGCCAGAAGAACAACCTGAGCCAGCACATGCGCCGTCACCAGGGGCTCAAACCCTTCAAATGTGACACTTGCGAGAGGGGGTTCGTGTCTAAGGGTGAGCTAGAGGCGCACGCTCGCAAGCACAGCGGCGCGCATCCCTTCGTGTGCGACGACTGTGGGGGCAGCTTCACCACATCCAGTTCCTTGACCAAGCACAGGAGAATACACACAGGGGAGCGTCCATACGCCTGTGACCTGTGCCCCATGAGGTTCACCGCACTCAACACACTGAAGAACCACAGACGTACACACACTGGTGAGAAACCTTACCAGTGCTCCCACTGTGAGAAGGCCTTCACTCAGAGGAACGATTTAGTGTCACATATACGATGTCACACCGGTGAGAGACCCTATATATGCACGTGCTGTGGCCAGGCCTTCAGGAAAGCCTCCGCTTTGAAGGTGCATATAAAAGTGCATAGCAAAGATGGTATGGTTATGTAG
Protein Sequence: MDSMLGKIICRTCLTEASGYKSLLTKMDGEDRTLREVLSNFTNMDILLSDKYPKQVCFECYTMIFKADEFKKRCLQSETILKNGFLSHTFEELIKREMVHTDHPTVGNTQMNNSYEVCVTNNLPASGEIDITVMENYYNTTDNLKNDIQFVKEEQDDFLHDSIDDLHEDMIPESESVQNIGIVINNTGLKTDKKKLKGIEKSEFGPNTYDIISACTLCEEEFHDFSLLQAHMLSHKEKNIDNVDYQCTVCKSNFTNKLSYKIHIKTHKEKVRMKHKKTKSNIENKNGLNLMLICPKCGEKFTKMDLFQSHLKTHKEEDKIDEVVNNIIKLQNEVQRYQCSLCMRKFARRSSLVTHLKRHDDRAQIKFPCKTCKREFQHKAHLENHVVLVHSKEKGFTCNICNRSFSTQESLDSHKDRHKADRKHECKVCSKSFTMLSTLTEHTKIHTGEKPYLCSVCGRGFSQKNNLSQHMRRHQGLKPFKCDTCERGFVSKGELEAHARKHSGAHPFVCDDCGGSFTTSSSLTKHRRIHTGERPYACDLCPMRFTALNTLKNHRRTHTGEKPYQCSHCEKAFTQRNDLVSHIRCHTGERPYICTCCGQAFRKASALKVHIKVHSKDGMVM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01021511;
90% Identity: -
80% Identity: -