Mmin019338.2
Basic Information
- Insect
- Mycalesis mineus
- Gene Symbol
- clz9
- Assembly
- GCA_034621355.1
- Location
- CM067901.1:1215908-1218049[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.5e-09 5.6e-06 26.7 0.1 2 38 17 54 16 59 0.89
Sequence Information
- Coding Sequence
- atggtcagaaattacaagaaaaaggGAACTAGGAGTGGAGAAGTTGACGAACAGGCAATGTTAAAAGCTATCGATGAAATTTTGGAAAACAAACTCTCTTTAAGGAAATCAGCAGCCAGATATGGAGTTAATGCACAAACACTAAATAGCCGTAtcaaaaaattacgaaaatctcaAGATCTTGATACCGATCGAAATCATGTATTCGAATCCAAATATTCTTCACagcaaatttttacaaaaactgaAGAAGatcatttgaataaatatatcttaaCGTGTTCCAAAATGAACTTTGGCCTTACATGTATCCAAGTTCGAAAACTTGCATATGAATTCGCAAaggctaataatataaaatatcatgcAAGTTGGAATAATAATGAGATGGCCGGAGCAGACTGGTTAGCAAGTTTCCGAAAACgtcataaaaatttaagtttacgtAAACCTGAAAATACTAGCGCTGCTAGATCATTCGGGTTCAACAAAACGGCAGTGAATGATTTCTTCCAGAACCTGGAAAGTATATACcgtaaacataattttactgcCGATCGTATTTTTAACTACGACGAGTCTGGTATTTCAACTGTTTTGAATACACCAAAAATATTTGCTGACAAGACTCAAAAACAGGTAGGTCAAATAGTTTCTGCCGAAAGAGGAGAACTGGTCACATTTGGTGGGATTGTTTCAGCCAGTGGAAATACTATACCGCCCTTATTCATCTTCCCTCGAGTGCACTATAAAGACCACTTCTTAGAAGGTGCTCCAGAAGGCTCCTTAGGTGTAGCTACGAGAAGTGGTTggataaattctaatattttcgTTGAAGTTCTAAAGCACATCTCGAAACACACGTTATGTTCGAAAGAAAATCCAATATTACTTTTATGTGACAATCATGAAAGTCACATTTCTATAGATGCAATCAATTACTGCCGTGACAACGGGATTGTGTGCCTTTCCTTTCCTCCTCACACGACTCATCGCCTACAACCGCTAGATGTTGGAGTATTTGGtccattaaaatcaaaattaaaaatagcattTAATGACTGGCACGTTTCCAACCCAGGAAAAACacttagtatttataatatccCAAAACTCACAAagataccttatttagagtcgtTCAATGGTAGAAATATCACCAGTGCTTATGAGAAAACCGGAATATGGCCTTTTAATAAGTTGATTTTCAATGATGATGACTTTGCGTCGGTTCAAGTGTATCATTCAAATCCTATAACAACTACCAATGAAATCACTGATGGTGAGGAGCTAGCAATAGCAGAAGATGAGCTTGCTACAGTTAGTGCTGAACTTGGTGATCTTCATACTCGAACACCATCGACTTTGTCAAGAGATGTTTCGCCTTCCTTACTTTCACAACATTTTACATCAACAGTGATAGATTTTGATAACCCTGCACCATCTACTTCCAAAGTGTTGAAGACGCCAGAAATGATAAGACCTTTTCCGAAAGTTCAAAAAcgcatacaaacaaaaaaaagtcgACCACTTGGAAAATCAAGAATTTATACAGACACGCCTGAGAAGACTAGAATCGAagatttggaaaaaattaaagagatgAAGAGATTAGAAAAAGAACGGAAAAGTAAAGCAAGAGAAATAAAGAGAGCGttgagtttattaaataaagattgTGAGAAATCAAATAAACCAAAAAGAATGAAAACCAAAGAAATTGAAACAATCAGTAGCGATAGTGAAACAGATGTTTCACTATCGCTACTAAGAGAAAGTTCTACTTCACCTTGCGACTTTCATGACGAAAACGAAGAAGAAGACGAATATGAAGAGCCTGTTAACCCTGAAAATGTCAAAGACAATGCCTATGTGCtcgtaaaatttgaaaaaaaaatgtctgttaTTTACTATGTCGGACAAATCATCAAACATTACAGTTCGACAGAAGTGATGGTGTCATTTTTGAGAAAGAAACCGGGATCGTCTATGAAATTTGTATTTCCAGATGTGAAAGATGAAGCATCAGTAGATCTATCGGATATAGTTTCGATATTGCCGGATCCTCAATCAGCCAAGACAGCTAGAACTGCtagtattttaagttttaacaaaGATCTCTCTTTTTATAACGTTCGTTAA
- Protein Sequence
- MVRNYKKKGTRSGEVDEQAMLKAIDEILENKLSLRKSAARYGVNAQTLNSRIKKLRKSQDLDTDRNHVFESKYSSQQIFTKTEEDHLNKYILTCSKMNFGLTCIQVRKLAYEFAKANNIKYHASWNNNEMAGADWLASFRKRHKNLSLRKPENTSAARSFGFNKTAVNDFFQNLESIYRKHNFTADRIFNYDESGISTVLNTPKIFADKTQKQVGQIVSAERGELVTFGGIVSASGNTIPPLFIFPRVHYKDHFLEGAPEGSLGVATRSGWINSNIFVEVLKHISKHTLCSKENPILLLCDNHESHISIDAINYCRDNGIVCLSFPPHTTHRLQPLDVGVFGPLKSKLKIAFNDWHVSNPGKTLSIYNIPKLTKIPYLESFNGRNITSAYEKTGIWPFNKLIFNDDDFASVQVYHSNPITTTNEITDGEELAIAEDELATVSAELGDLHTRTPSTLSRDVSPSLLSQHFTSTVIDFDNPAPSTSKVLKTPEMIRPFPKVQKRIQTKKSRPLGKSRIYTDTPEKTRIEDLEKIKEMKRLEKERKSKAREIKRALSLLNKDCEKSNKPKRMKTKEIETISSDSETDVSLSLLRESSTSPCDFHDENEEEDEYEEPVNPENVKDNAYVLVKFEKKMSVIYYVGQIIKHYSSTEVMVSFLRKKPGSSMKFVFPDVKDEASVDLSDIVSILPDPQSAKTARTASILSFNKDLSFYNVR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00357390;
- 90% Identity
- iTF_01021125;
- 80% Identity
- -