Mnit025890.1
Basic Information
- Insect
- Musotima nitidalis
- Gene Symbol
- -
- Assembly
- GCA_949126915.1
- Location
- OX421440.1:864607-866088[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.039 33 5.4 0.7 12 43 54 82 39 83 0.81 2 14 0.078 66 4.5 0.8 15 43 87 112 84 113 0.89 3 14 0.045 38 5.3 2.3 15 29 116 130 113 141 0.79 4 14 0.00013 0.11 13.4 0.8 8 43 139 171 135 172 0.84 5 14 0.025 21 6.1 0.3 16 29 178 191 175 203 0.80 6 14 1.7 1.4e+03 0.2 1.9 15 43 207 232 198 233 0.77 7 14 1.1 9.6e+02 0.8 4.8 16 43 236 260 224 261 0.85 8 14 1.9 1.6e+03 0.0 0.1 15 27 273 285 267 291 0.79 9 14 4e-05 0.034 15.0 1.8 4 44 292 329 289 329 0.90 10 14 0.064 54 4.8 0.3 16 40 332 353 330 357 0.75 11 14 0.74 6.2e+02 1.4 4.5 17 28 363 374 355 387 0.71 12 14 0.00078 0.66 10.9 2.0 11 40 386 412 380 418 0.76 13 14 0.0053 4.5 8.2 3.4 13 43 416 443 409 444 0.86 14 14 2.6 2.2e+03 -0.4 0.0 15 23 455 463 449 467 0.86
Sequence Information
- Coding Sequence
- ATGGATGACGCAATAGAAAAAGTTTTCATCAAAGAAGAACCGAATAATGCTCATACCTCTACAGAAATTGTGAAATTGGAATCAATTAGCTCTGAAGATGACGAGAAACCCGAAAAAAACCATATGGACAAAGTTCAAAGTGAAGTTAAATTCGTAAACGGCAAGAGAAATCGGTTACCGTGTACTATTTGCGATGGCACATTCAAAAACAGAGCTATATTGAAGCATCACTTGCAATCAGTGCACGCATCAGCCGAAGATTCGGTGGACTGCAAACAATGTTTTCGGACGTTCAAATCCATAAGCCATCTACGTTCTCATGTCTCCTCAGTCCATGCTGCAATCAAAATAGTTCAATGTAAACATTGCAACCGCGAATTCGAAACTAGAAAAAAGCTTAATAACCACGTATTCTACACACACCCGGCACCTGAAGAAAGTGTAACTTGCAATGTATGCTCAAAGGTATTCAAAGCGAAATATCGTTTGAAAATCCATATGCGTATGGTGCATACCAAAGGTGTTTCAGAAAAGCAAACTTGCCCTCATTGCAATAAGGAGTTCAAATCCGATGTTCTGCTCAAAAGACACGAGAAATGGGCTCATCCCCCAGATGGAATGTCCTATCGATGTCAGCTATGCAGTAGGATACTTCCTTCGCTACCTTGCTACAAGAAACACATGAAAAACGTTCATGGCATGACTCACTTTACATGCAACGTATGCAGTAAACTTTTCCAGTCAGAATACACTCTTGGAAGACATATGAAGACCGTACATGAAGGTGTTAAACTTGAAAGAAAAGAGTACAAAGCAGGAACTATACCTTGCACAGTTTGCGGCAAAATGTTCGCGACTAACACAGCGTTGTCTTGGCATTATGAGCGTTTGCATTCCGAAAATAAAATCGACACAACTTGCCATTTATGTCCGAGAGAATTCAACGACACGAGCGCTTTGAAACGACACATGGAATCTGTGCATTCTATGAGGAAAGCCAAGTGTGATTTGTGTCCTAAGACTTTCAAATCCTACATCAGCTTACAAAGACATATGACAGTTACCCACGCTCCTCCGGAAGCGGCGAAAACTTGTGAAATATGTCATAAAACGTTTAAATGTGCTATGCATCTAAACATTCATATCTACTCGGTACACCCGAAAGAGGGAAGAGTTACTTGCGAGATTTGCAAAAAAGACTTTtcgtcaaaaaagtatttagtcaAGCATATCAAATCTCACAATAACAGCAAGGATGTTCCTTGTGGCATTTGCGGGAATTACTACAAAAGCTTCCACGATATGAAGAGACATATAAGGAGAATACACTTTAAACAAATAGCAAAGAAAGGCTCGGGTAGTTTTATGAACACGTGTTTAAAATGTGGATTAAGTTTTGAGGTTATTGAGGAGTTCCATTCGCATATAATGAGTTGTGAAGTTAACGTCGGAGTTACGGTTAAAGTTGAAATTATGGAATAG
- Protein Sequence
- MDDAIEKVFIKEEPNNAHTSTEIVKLESISSEDDEKPEKNHMDKVQSEVKFVNGKRNRLPCTICDGTFKNRAILKHHLQSVHASAEDSVDCKQCFRTFKSISHLRSHVSSVHAAIKIVQCKHCNREFETRKKLNNHVFYTHPAPEESVTCNVCSKVFKAKYRLKIHMRMVHTKGVSEKQTCPHCNKEFKSDVLLKRHEKWAHPPDGMSYRCQLCSRILPSLPCYKKHMKNVHGMTHFTCNVCSKLFQSEYTLGRHMKTVHEGVKLERKEYKAGTIPCTVCGKMFATNTALSWHYERLHSENKIDTTCHLCPREFNDTSALKRHMESVHSMRKAKCDLCPKTFKSYISLQRHMTVTHAPPEAAKTCEICHKTFKCAMHLNIHIYSVHPKEGRVTCEICKKDFSSKKYLVKHIKSHNNSKDVPCGICGNYYKSFHDMKRHIRRIHFKQIAKKGSGSFMNTCLKCGLSFEVIEEFHSHIMSCEVNVGVTVKVEIME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01020535;
- 90% Identity
- iTF_01020535;
- 80% Identity
- iTF_01020535;