Basic Information

Gene Symbol
grh
Assembly
GCA_000371365.1
Location
Scaffold0:777112-1105952[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.3e-63 5.9e-59 198.7 0.2 24 221 799 991 785 993 0.94

Sequence Information

Coding Sequence
ATGTCCTCATCATCTCCGGTCACGACCAGTGTCATTACCGCCAACGAACTTGCTTTAACGGCCCAAGCGAATATGCATCACCGGGCTGCCCACATGCATGAAGCCCCCCTCTCGCCAGCACGTGCCAATTCAGTATCAGTGGCTGGAGCCACAGGAACCACAACGGGCAACATTGTCACCACCACCAGTATTTCGAATTCTGGACAAACGGCCAATGGTATACCCATGATATCGCCCGAAGCCATGCACCACTCGTCACCGGATAGTCCACAACCAGAATTGGCCACCATGACCAATGTAAATGTGCTCGATCTGCACACTGACTCCTCCAAGTTATACGACAAAGATGCTGTCTTCATATACGAAAGCCCCAAAGTGGTAATGACAGGGGGTGGTGGAGGTCCCCAGGATGATCATGTCATTGATGCTCGCATGGTGGCCCAACTGAATCAGCAGCAGGCAGCCGTGCAGACGGCCCATGAAAATCAACCCTTGGCCAAAATAGAATTCGatgaaaatcaaataattcGAGTTGTCGGACCCAATGGTGAGCAACAACAAATCATCTCCCGGGAAATCATTAACGGCGAACATCACATTCTGTCACGCAATGAGGCCGGTGAACACATTCTAACACGCATTGTCAGTGACCCCTCGAAACTGATGCCCAACGACAATGCCGTGGCAGCAGCCATGTTTAATCAAGCCCAAAAAATGGCCAATGATCATGCCGTCTATCAAACATCTCCCCTGGACGCCTCCGTTTTGCAGCATTACGACACCGAGGCTGTGGTCAAGACCGAGGTTGATATCTACGATGATCCGAAGAAACAAAATTCCGGACAAATTATATACACCACATCGGGCCCAGATCCGGGAAATCCCAAACATTTATCGCACTTACCGATGGGTGCCAAATTGGATCCGGACATGTATCCCACAGATAAACACATCGATTTAATCTACAACGATGGCAATAAGACGGTGATCTACACAACAACGGATCAAAAGGGTTTGGAAATTTATTCGGGCAGTGATTTGAGTGGCCTTGTGGCTGACGGCCAGGTTGTGGTCCAGGGTGGTTTACAATATGCTGGACATGGTGGACCAGGAGGTCAGCCAGTTTACATTGTGGCCGATGGTGCTCTACCGCCGGGTGTGGAAAGTCATATTCAGAGtGCTCCCAGTTCGGCTGTTAGCAAACTTAACGGTCAAACCACACCTCTCGATGTGTCAAGCCTATCGCAAAACGAGATACAAGGCTTATTGCTTGGCTCACACCCATCGGCCACAAGCGGCGGCGCAAATGTCACCACAGCCTCAAACATTgcccaccaacaacaacagcagcagcaacagcaatcgGCCATTGTGGCAGCCAGTGCAGCTGCTGCCGCCAATGGTGGATCCGGTGGTGCGGGAACTGTCGTCATAACAGCTGATCAGCAACGAGCACAGCAGCAGCAGGCCAATGCAACGGCCACGATTAGCATTAAACGAGAACCCGAAGATTTGCGTAAAGATCCTAAGAACGGTACCGCTAGTAATGGCTCAGCAGCCAGTAGCGGACAAAAGGTCATTGTATTGCAACAATCACCATCgcccacacacatacaaattaaAGAGCCGCCACCCAGTCCTGGAAGTCCCACAAATCAAACAGAAGCCATGTACGCTGCCGGCGGCGGCACTCAAATTTATCTACAGggTCCCCATCAAAATTCAGCCGTTGGTCCCGGTGGCAATGTCAACACACAAACCCCCAGTCCGGGCCCGTATATAGGAGCCGATGGCTATGGCATGTATGCCACCAGCCGTCTGACCACAGCTCCCACCACCACATTTTTGTCGGAACCCTATTACAGGGAATatttcaccaccaccaccacaaccgaTGGCCAAGGTTATGCACCCACACGCACCATTTATGGCGACAGTGAGGGACCCCAGCCGGGCACCACATACGAGGGACGTTTTACCACAACAACCACCACAAATAATGGTATACCGCCACCGCACTCCAcaccaaatgttttgaaaaatggtgGCACACCAATCTATGCCAAGGCGGTAACTGCAGCTGGACTAACAGTGGATTTGCCGAGTCCGGATTCGGGTATTGGAGCGGATGCCATAACGCCGCGCGATCAAAACAATATACAACAGTCCTTCGATTACACAGAACTTTGCCAGCCCGGCTCATTGCTGGACAATAATGGTGGCATACCAGTTTCCGTCAATAGCATACCACGCGGTGCTGTCAGCGTTCATGGCGGCCAAAATAGTCCGACCACATCGCTGGGCGGCACCAGCGCCAATGGCAGTGCCACCCGTTCCCGTCCATGGCATGATTTTGGCCGTCAAAATGATGCTgataaaatacaaataccaaaaatTTTCTCAAATGTTGGCTTCAGATATCACCTGGAATCGCCAATCTCATCATCACAACGACGAGAAGATGATCGCATTACATACATCAATAAAGGACAATTCTATGGCATAACATTGGAATATATACCCGATCCGGATAAGCCATTGAAAAATACAACAGCCAAGAGTGTCATTATGTTAATGTTCCGTGAAGAAAAATCCCCTGAAGATGAAATCAAAGCCTGGCAATTTTGGCACAGTCGACAGCATTCGGTGAAACAGAGAATTTTGGATGCAGATACCAAGAATTCAGTGGGTTTGGCCGGTTGTATTGAAGAAGTCTCCCACAATGCCATAGCAGTCTATTGGAATCCTTTGGAAAGTTCCGCCAAGattaatATAGCCGTGCAATGTTTAAGTACAGATTTTAGCAGTCAGAAAGGTGTTAAGGGTCTACCACTACACATACAAATTGATACCTTTGAAGATCCCCGTGACACACAAGTCTTCCATCGAGGCTATTGTCAAATTAAAGTTTTCTGCGATAAGGGTGCTGAGCGCAAAACCCGTGATGAAGAACGACGTTCGGCCAAGCGTAAAATGACCGCTACGGGACGCAAAAAATTGGATGAACTATATCATCCCGTTACCGATCGTTCAGAGTTTTATTCAATGCAAGATCTTACCAAGCCGCCGGTGTTGTTTTCGCCAGCCGACGATTTGGAGAAGGGCTTCTATGGCCATGAGACTGATGGGGCGGGTGATTTAAAGGGTGCCTCGCCGTTCTTGTTGCATGGACAGAAGGTAGCAACGCCAACATTGAAATTTCACAATCATTTTCCACCAGACATGCAGACTGACAAAAAGGATCACATTTTGGATCAGAGTTTGGCCATGAGCGAATTTGGACCGCCCATGAAACGTGGCCGCATGACCCCACCCACCAGCGAAAGGGTCATGCTGTATGTGAGACAAGAAAACGAAGATGTCTATACCCCCCTGCATGTTGTGCCGCCCACCACCATTGGCCTTTTGAATGCGattgaaaataaatataaaatctcaacaacgagtataaataacatatatcgaacaaataaaaaGGGGATTACGGCGAAAATTGATGATGATATGATTTCATATTATTGCAACGAAGATATTTTCTTATTAGAAGTCCAGCAAATCGAAGAGGAATTGTATGATATCACATTAACTGAATTGCAAAATCATTGA
Protein Sequence
MSSSSPVTTSVITANELALTAQANMHHRAAHMHEAPLSPARANSVSVAGATGTTTGNIVTTTSISNSGQTANGIPMISPEAMHHSSPDSPQPELATMTNVNVLDLHTDSSKLYDKDAVFIYESPKVVMTGGGGGPQDDHVIDARMVAQLNQQQAAVQTAHENQPLAKIEFDENQIIRVVGPNGEQQQIISREIINGEHHILSRNEAGEHILTRIVSDPSKLMPNDNAVAAAMFNQAQKMANDHAVYQTSPLDASVLQHYDTEAVVKTEVDIYDDPKKQNSGQIIYTTSGPDPGNPKHLSHLPMGAKLDPDMYPTDKHIDLIYNDGNKTVIYTTTDQKGLEIYSGSDLSGLVADGQVVVQGGLQYAGHGGPGGQPVYIVADGALPPGVESHIQSAPSSAVSKLNGQTTPLDVSSLSQNEIQGLLLGSHPSATSGGANVTTASNIAHQQQQQQQQQSAIVAASAAAAANGGSGGAGTVVITADQQRAQQQQANATATISIKREPEDLRKDPKNGTASNGSAASSGQKVIVLQQSPSPTHIQIKEPPPSPGSPTNQTEAMYAAGGGTQIYLQGPHQNSAVGPGGNVNTQTPSPGPYIGADGYGMYATSRLTTAPTTTFLSEPYYREYFTTTTTTDGQGYAPTRTIYGDSEGPQPGTTYEGRFTTTTTTNNGIPPPHSTPNVLKNGGTPIYAKAVTAAGLTVDLPSPDSGIGADAITPRDQNNIQQSFDYTELCQPGSLLDNNGGIPVSVNSIPRGAVSVHGGQNSPTTSLGGTSANGSATRSRPWHDFGRQNDADKIQIPKIFSNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYIPDPDKPLKNTTAKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLAGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHIQIDTFEDPRDTQVFHRGYCQIKVFCDKGAERKTRDEERRSAKRKMTATGRKKLDELYHPVTDRSEFYSMQDLTKPPVLFSPADDLEKGFYGHETDGAGDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSLAMSEFGPPMKRGRMTPPTSERVMLYVRQENEDVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISYYCNEDIFLLEVQQIEEELYDITLTELQNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_01374737;
80% Identity
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