Basic Information

Gene Symbol
grh
Assembly
GCA_015586225.1
Location
NW:846836-985276[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4e-63 2.9e-59 199.7 0.2 24 221 794 986 780 988 0.94

Sequence Information

Coding Sequence
ATGTCATCATCGCCTGCTACAACAAGTGTAATAACTGCTAACGAACTTGCTTTGACGGCTGCCCAAGCCAATATGCATCATCGTGGTGGACACATGAATGAGGCACCTCTTTCGCCGGCTCGTGCTAATTCCGTATCGGTGGCTGGTGCAACTGGCACAACGACAGGAAATATAGTGACAACAAGTATGGCCAATTCGGGTGCTGGAACGGGCAATGGCTTGCCGTTGATATCACCGAATGCAATGCATCGTTCACCCGACAGTCCTCAGCCGGAATTGGCTACCATGACGAATGTAAATGTTTTAGACTTGCACACAGATTCATCCAAACTTTACGATAAGGATGCTGTTTTTATCTATGAAAGTCCAAAGGTGGTGATGACCGGTGGCAGTCAACAAGACGATCATGTCATTGATGCTCGCATGGTGGCTCAGTTAAATCAGCAACAGTCTGCTGTACAAACAGCTCACGAGAACCAACCTCTGGCCAAGATTGAGTTCGATGAGAATCAAATAATACGCGTGGTGGGTCCAAATGGAGAACAACAACAGATTATTTCGCGAGAAATCATAAATGGAGAACATCACATATTATCGCGCAACGAGGCTGGCGAACACATTCTCACTCGTATTGTTAGTGATCCATCAAAGTTGATGCCGAACGATAATGCTGTAGCTGCAGCCATGTTTAATCAGGCCCAGAAGTTGGCCAATGATCACAACGTCTACCAGACCTCGCCATTGGATGCTTCTGTTCTTCAACACTATGACTCCGAGGCAGTGGTTAAAACTGAAGTTGACATTTATGACGAACAAAAGAAACACAATGCAGGCCAAATTATCTACACTACATCTGATCAAGATGGCGGCGGCGGTGGTGGAGGTGGCAACACAAAACAATTGTCTCACTTGCCCATGGGTGCCAAACTGGACCCCGATATGTATCCGTCAGATAAACATATCGATTTGATCTACAATGATGGCAACAAAACAGTCATCTACACTACAACATCGGATCAGAAGGGCTTAGAAATTTATTCTGGCAGCGATTTAAGTGGTTTAGTGGCCGATGGCCAAGTCGTTGTACAAGGTGGTCTACAATATGCCGGTCCCGGCGGTGCTGGTGGTCAGCCCGTTTACATTGTATCAGATGGTGCCTTACCACCTGGAGTGGAAGGTCATATTCAAAGTGCTCCCAGTGCAAAGCTAAACGGTCAAACCACACCTCTTGATGTGTCGAGCCTATCGCAAAACGAGATACAAGGCTTATTGCTTGGCTCACACCCATCAGCAACTACGGCTGCTGTGGCGGCTGCTGCCGCAAATGTCACCACAACAACAACTCtagcacaacaacaacagcagcaacaacaacaacaacagcagcagcaatcaACCATAGTTAGTGCAGCTGGTGGGGGTACGGGTACAGTGGTCATAACAGCTGATCAACATCGTCAACAGGCCACCACAACCACGATAAACATTAAAAGGGAACCGGAAGATTTGCGTAAAGATCCTAAAAATGGTACCGCTAGTAATGGCTCAACAGCCAGTAGCGGACAAAAGGTTATTGTATTACAACAATCACCATCGCCCACACAAATACATATCAAAGAACCGCCACTTAGTCCTGGAAGCCCAACAAATCATACAGAAGCCATGTACGCTGCCGGCGGCGGCACTCAAATTTATCTGCAGGGTCCTCATCAAAACTCAGCAGCTGGACCGGGCAGCAATGTAAACACACAAACACCCAGCcctggaccttatataggagccgATGGCTATGGCATGTATACAACTAGTCGCTTGACAACAGCTCCAACCACCACATTCATCTCGGAACCCTACTATCGTGAATATTTCCCAACAGATGGTCAAGGTTATGCACCTACCCGCACTATATACGGCGACAGTGAAGGTCCCCATCCGGGCACCACTTATGAAGGACGTTTCACTACCACAACCACCAACAGTGGTGGTATACCACCTCCCCATCCATCGGCGAATGTAACGAAAAACAATGGCGGCACCCCCATCTATGCAAAGACAGTAACAGCTGCTGGTCTTACAGTCGACTTACCCAGTCCGGATTCGGGCATAGGAGCAGACGCCATAACACCGCGAGATCAAAACAATATACAACAGTCCTTCGATTATACGGAACTTTGTCAGCCCGGTTCATTGCTGGATAACAATGGCGGCATACCTGTTTCGGTTAATAGCATACAACGTGGTGCTGTTAGTGTCCATGGCGGCCAGAATAGTCCCACAACCTCATTAGGTGGCACCAGTGCTAATGGTAGTGCTACTCGTTCTAGGCCATGGCACGATTTTGGTCGACAAAATGATGCTGATAAAATACAAATACcaaaaatATTCACAAATGTTGGTTTCAGATATCATCTAGAGTCGCCAATAAGTTCATCCCAAAGACGAGAAGATGATCGAATAACCTACATCAACAAGGGACAATTCTATGGCATCACCTTGGAATATATACCCGATCCCGATAAGCCCATCAAAAATACAACAGTTAAGAGTGTGATTATGTTAATGTTCCGTGAAGAGAAATCGCCTGAAGATGAAATTAAAGCCTGGCAATTTTGGCACAGTCGACAACATTCTGTGAAACAAAGAATCTTAGATGCAGATACCAAGAACTCAGTGGGTCTAGTTGGCTGTATTGAGGAAGTCTCCCACAATGCCATAGCAGTCTATTGGAATCCTTTAGAAAGTTCTGCCAAgATAAATATCGCCGTGCAATGTTTAAGTACAGATTTTAGCAGTCAAAAGGGTGTGAAGGGTTTACCACTACATGTACAAATCGATACATTTGAAGATCCTCGTGATGCCCAAGTCTTTCATCGAGGCTATTgtcaaattaaagttttctgcGATAAGGGTGCCGAACGTAAAACTCGTGATGAGGAACGTCGTGCTGCTAAGCGTAAAATGACCGCTACGGGACGTAAAAAATTAGACGAACTTTATCATCCGGTTACAGATCGTTCAGAGTTTTATACAATGCAGGATCTTACCAAGCCGCCGGTATTATTTTCACCAGCCGACGATTTGGATAAGGGCTTCTATGGCCATGAGTCTGATGGAGCGCCAGATTTAAAAGGTGCCTCACCATTCCTCTTGCATGGACAAAAGGTAGCCACACCAACATTGAAATTTCACAATCACTTTCCGCCCGACATGCAGACTGACAAAAAAGACCATATTTTGGATCAAGGTTTAGCCATGGGTGAATTTGGACCTCCTTTGAAGCGTGGCCGCATGACACCGCCCACCAGCGAACGGGTTATGTTGTATGTGAGACAAGAAAATGAAGATGTTTACACCCCCCTACATGTTGTGCCACCCACCACCATCGGCCTCTTAAATGCGattgaaaataaatataaaatatccaCAACgagtataaataatatttatcgaACAAATAAAAAGGGgATTACGGCGAAAATTGATGATGACATGATTTCGTATTATTGCAACGAAGACATTTTCTTATTGGAGGTGCAACAACTGGAGGAGGAATTGTATGATATAACGTTAACAGAATTGCCAAACCACTGA
Protein Sequence
MSSSPATTSVITANELALTAAQANMHHRGGHMNEAPLSPARANSVSVAGATGTTTGNIVTTSMANSGAGTGNGLPLISPNAMHRSPDSPQPELATMTNVNVLDLHTDSSKLYDKDAVFIYESPKVVMTGGSQQDDHVIDARMVAQLNQQQSAVQTAHENQPLAKIEFDENQIIRVVGPNGEQQQIISREIINGEHHILSRNEAGEHILTRIVSDPSKLMPNDNAVAAAMFNQAQKLANDHNVYQTSPLDASVLQHYDSEAVVKTEVDIYDEQKKHNAGQIIYTTSDQDGGGGGGGGNTKQLSHLPMGAKLDPDMYPSDKHIDLIYNDGNKTVIYTTTSDQKGLEIYSGSDLSGLVADGQVVVQGGLQYAGPGGAGGQPVYIVSDGALPPGVEGHIQSAPSAKLNGQTTPLDVSSLSQNEIQGLLLGSHPSATTAAVAAAAANVTTTTTLAQQQQQQQQQQQQQQSTIVSAAGGGTGTVVITADQHRQQATTTTINIKREPEDLRKDPKNGTASNGSTASSGQKVIVLQQSPSPTQIHIKEPPLSPGSPTNHTEAMYAAGGGTQIYLQGPHQNSAAGPGSNVNTQTPSPGPYIGADGYGMYTTSRLTTAPTTTFISEPYYREYFPTDGQGYAPTRTIYGDSEGPHPGTTYEGRFTTTTTNSGGIPPPHPSANVTKNNGGTPIYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNIQQSFDYTELCQPGSLLDNNGGIPVSVNSIQRGAVSVHGGQNSPTTSLGGTSANGSATRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYIPDPDKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDAQVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYTMQDLTKPPVLFSPADDLDKGFYGHESDGAPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQGLAMGEFGPPLKRGRMTPPTSERVMLYVRQENEDVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISYYCNEDIFLLEVQQLEEELYDITLTELPNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01019201;
90% Identity
iTF_00921210;
80% Identity
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