Mdei001846.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Morpho deidamia
Gene Symbol
ZFX
Assembly
GCA_029101505.1
Location
JAPJRL010000003.1:559786-568134[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 3.1 2.5e+02 3.1 1.5 1 23 250 275 250 275 0.88
2 16 0.24 20 6.6 1.2 1 23 319 341 319 341 0.97
3 16 0.79 64 5.0 0.1 6 23 353 370 353 370 0.95
4 16 0.11 9.2 7.6 1.8 1 23 379 402 379 402 0.96
5 16 7.2e-06 0.00058 20.8 2.5 2 23 424 445 423 445 0.96
6 16 2.8e-05 0.0023 19.0 1.5 1 23 452 475 452 475 0.96
7 16 0.00075 0.061 14.5 0.9 1 23 481 503 481 503 0.98
8 16 0.00023 0.019 16.1 0.4 1 23 509 531 509 531 0.97
9 16 0.11 8.6 7.7 0.2 1 20 537 556 537 557 0.95
10 16 0.55 44 5.5 3.3 1 23 675 697 675 697 0.93
11 16 0.00028 0.023 15.8 2.6 2 23 704 726 703 726 0.94
12 16 0.0042 0.34 12.1 2.6 1 23 732 754 732 754 0.93
13 16 1.4e-06 0.00011 23.1 3.3 1 23 760 782 760 782 0.99
14 16 0.0046 0.37 12.0 1.8 1 23 788 810 788 810 0.96
15 16 4.3e-05 0.0035 18.4 3.8 1 23 816 838 816 838 0.96
16 16 0.12 10 7.5 5.4 1 23 844 867 844 867 0.91

Sequence Information

Coding Sequence
ATGTCTTACAAGTTATGTTGTGTCCCCGGTTGCACTGTAACTGAAGGCGACGgaATACCTCTACATTGTTTTCCAAACCCTGTCAATGAGTATGACAGATTCAGAGAATGGATTGACAAATGTGCTTTGAAGATTGAAGGAAAAGatgatttatacatatttagcaATAGACGAGTTTGCCACGGACATTTtacatcaaattattattatccaaAAAATAGACTGTGTAATCTAGCAATTCCAATGCTTAATTTGCCAGgCATGGCTCAAGACAATATTAAAGCTATTCCCAATACCTTAAGCCACAAGAGCACAATCTCCATTGTCTATGAAGGAGTGGAAAACTATTGCCGTGTTTGTGCTACCACAGCTGAAAAGGGTTTCCCAATATTTGATGGTCGAGGTGAACAAGATGAACTTGTGTTGAAAATCAACAAGTATTTACCAATAAAGATATCAAAAGTAGATGGACTGCCTCAAACAATATGTCACCACTGCTGGGCCACGATTATGGCGTGGGATAAATTTGTCAAATGCTCCCTCGAGGCCGAGCTGAGGCTGCAACAGAAGCTACCTGTAACGGAATTCTTGGACCCTGAAAGCAAACAAAAACAAGAGGAGATATCTGAAAGTGCTGAAACGACTTCGCAGACTGAGGTAAAGAGTTCGTTGATAAATAGCGTAGTCAGAGAAATATTGACGGATTACTTTCACGAATTTAATATAGAGAATAATTCTGATCTGGAATATGTCTGCCATTCGTGCACCGAACGGCCCGTGTGCAAATCCATAGAGAATTTAATAAACcatttaaaatcaatacataGTCCCCAACTAGGAAACGCGCAAACGATCAAAACGTTCATTAAAGATAATGTCACCTTTGACGAAGTACTCGATAAAGACGATATCGATAGCGAATCGATTAACGACGCAAAGGAAAAGCTCCAGAACTATTACTGTCCGTTTTGCGAGAGCGTATTCTCAGCACCGAGTCGTCTTATCTGTCACCTCAATAAACATATTGAAATATGCATCACCGACGGCGTCATCTGTTGCGAAGAGCTGTTCGTCGACAAGTTCGCTTTCGTGAAACATCTTCAAACGCACGTCACTAGGCCTATGGACGAAAACCACAGCTGCAAGAGCTGCGGATTTAGGGCGCCCGATACGGACGAGTTGCacgtacatataaataaaactcatCCCGAAGTCGAGCGACGAAAAAAGATTTCCTACAACCCGAATTGCCAGAAGTACATTCGAGTGAAATGCGCGGAATGCAAAAAAACATTCTCCAACAAGCACAACCTTCGCGTCCATTTGGAAAACCATAAAGGGAACTCCGGTCAGTTCGCATGCGACAAATGCGGGAAGACATACAAGAATCGCGGAAGCCTGACGTATCACAACCGAGTCTTCCACCAGGGGATCCTCAGATTCTACTGCTCCCACTGCGGCGAAGCTTTCCCAACGCGCATGACCAGAAACGTACACGCGCGTATACACACCGGGTCGAAACCGTTCGCGTGCGTCCAGTGCGGGAAGTCTTACCGCGCGAAAAACACTCTGGACCGTCACATGGATATGCATTTAGATGTAAGGAAATATGCATGCCACACGTGCCCGAAGAGATGGACGCGACCCGTCAGCTTCGAATCCCATCTCGTGGACCGCGACAGTGATGCCGATCTTAAATACGTCACGGACGATAGCACTCGAGCGTCCGACGAGGACGACGAACCTCTCGCCTCTCTAGCGACGAAACCGACGGATCTGTACCAGAAATTTCATACGGCTCTCGTGAATTTCCGAAATCACTTTGTTACCGAACACGACAGCCAGGAATGCTCGGACTTCTCGGACTCTACCGACTCGGAGAACGCGCACGAGTTGGATTCACGCGTAGATCTGAACAGTTTCGATGATCTGACGGACTCCAATATGAGAAAGGATAAAATGGACGAGCAGACCCGCGCGGAACTCGGTCGGGCGCAAACGAAGATTAACGGGAAAGTGTATTACGCGTGCGAAATCTGCGGGAAACACTTGAGCTCGACGCACACGTACGTTTTCCACAAGCGCATCCACACCGGCGAACGGCCGTGCGTCTGTCACATTTGCGGCAAACAGTTCCGCGCGCCGAACGGGCTGCAGCGGCACGTCACGAAGACCCACGAGAAGCAGCGCTGGCACACTTGCATCGTGTGTTTCAATAAATTCGCGAACTCGCAGAACCTCAAGCAGCACATGCGAGTCCATACGGGCGAGCGGCCCTACGTCTGCGCCCACTGCGGGAAGAGGTTCACGCAGAGCGGGTCGCTGCACGTGCATCTCAAGACCCACAGCGAGCATTACCCTCATCACTGCGCCGAATGCGGCGCCAAGTTCAGGCTGCGAGCCGGTCTGGCGcggcacaggctcaaacacacCGGAGAGAGGCCGCACGCGTGCGTGCACTGCGGGAAAGGATTCAGACAGAAGCACGAGCTGAACGGCCACATCCTGACGCACACGGACTCGAAGCCCCACACGTGCACCGCGTGCGGCGCGGCCTTCCGGCAGCGGAGAGCCCTCCGTCATCACTGCAAGCGACTGCACCAGAACGAGGCGAAGGACGTCGCCCACGCGGTCTACGACCACCTCGGATAG
Protein Sequence
MSYKLCCVPGCTVTEGDGIPLHCFPNPVNEYDRFREWIDKCALKIEGKDDLYIFSNRRVCHGHFTSNYYYPKNRLCNLAIPMLNLPGMAQDNIKAIPNTLSHKSTISIVYEGVENYCRVCATTAEKGFPIFDGRGEQDELVLKINKYLPIKISKVDGLPQTICHHCWATIMAWDKFVKCSLEAELRLQQKLPVTEFLDPESKQKQEEISESAETTSQTEVKSSLINSVVREILTDYFHEFNIENNSDLEYVCHSCTERPVCKSIENLINHLKSIHSPQLGNAQTIKTFIKDNVTFDEVLDKDDIDSESINDAKEKLQNYYCPFCESVFSAPSRLICHLNKHIEICITDGVICCEELFVDKFAFVKHLQTHVTRPMDENHSCKSCGFRAPDTDELHVHINKTHPEVERRKKISYNPNCQKYIRVKCAECKKTFSNKHNLRVHLENHKGNSGQFACDKCGKTYKNRGSLTYHNRVFHQGILRFYCSHCGEAFPTRMTRNVHARIHTGSKPFACVQCGKSYRAKNTLDRHMDMHLDVRKYACHTCPKRWTRPVSFESHLVDRDSDADLKYVTDDSTRASDEDDEPLASLATKPTDLYQKFHTALVNFRNHFVTEHDSQECSDFSDSTDSENAHELDSRVDLNSFDDLTDSNMRKDKMDEQTRAELGRAQTKINGKVYYACEICGKHLSSTHTYVFHKRIHTGERPCVCHICGKQFRAPNGLQRHVTKTHEKQRWHTCIVCFNKFANSQNLKQHMRVHTGERPYVCAHCGKRFTQSGSLHVHLKTHSEHYPHHCAECGAKFRLRAGLARHRLKHTGERPHACVHCGKGFRQKHELNGHILTHTDSKPHTCTACGAAFRQRRALRHHCKRLHQNEAKDVAHAVYDHLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01017927;
90% Identity
-
80% Identity
-