Mdei003752.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Morpho deidamia
Gene Symbol
-
Assembly
GCA_029101505.1
Location
JAPJRL010000005.1:225700-237421[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.83 67 4.9 1.1 1 23 232 254 232 254 0.93
2 25 0.062 5 8.4 5.4 1 23 263 285 263 285 0.98
3 25 0.00014 0.011 16.8 5.6 1 23 291 313 291 313 0.98
4 25 0.00041 0.033 15.3 2.2 1 23 319 341 319 341 0.98
5 25 0.022 1.8 9.9 4.6 1 23 347 369 347 369 0.97
6 25 0.0018 0.14 13.3 2.1 1 23 375 397 375 397 0.97
7 25 0.022 1.8 9.9 3.5 1 23 403 425 403 425 0.98
8 25 0.00017 0.014 16.5 3.5 1 23 431 453 431 453 0.98
9 25 0.069 5.6 8.3 1.8 1 23 459 481 459 481 0.98
10 25 0.0017 0.13 13.4 4.0 1 23 487 509 487 509 0.98
11 25 8.5 6.8e+02 1.7 2.3 1 13 515 527 515 530 0.88
12 25 0.14 11 7.4 0.3 2 23 604 625 603 625 0.97
13 25 0.0029 0.24 12.6 2.6 1 23 680 702 680 702 0.98
14 25 0.00014 0.012 16.7 1.8 1 23 708 730 708 730 0.98
15 25 8.3e-05 0.0067 17.5 1.0 1 23 736 758 736 758 0.98
16 25 0.0055 0.45 11.8 1.1 1 23 763 785 763 785 0.97
17 25 0.0013 0.11 13.7 2.4 2 23 792 813 791 813 0.97
18 25 0.038 3.1 9.1 3.5 1 23 819 841 819 841 0.98
19 25 0.00041 0.033 15.3 1.8 1 23 847 869 847 869 0.98
20 25 0.0019 0.16 13.2 6.5 1 23 875 897 875 897 0.97
21 25 0.00021 0.017 16.2 0.7 1 23 903 925 903 925 0.95
22 25 0.00014 0.011 16.8 7.2 1 23 931 953 931 953 0.98
23 25 6.9e-05 0.0056 17.7 1.6 1 23 959 981 959 981 0.98
24 25 0.016 1.3 10.3 3.7 1 23 987 1009 987 1009 0.98
25 25 0.00018 0.015 16.4 1.2 1 23 1015 1037 1015 1037 0.98

Sequence Information

Coding Sequence
ATGGCTCAGAACATCCTCAGTAGTGTGGGAGGTAAACAAATGCACTATAATGACCCTGTGATAGAAAAATCAgatctcaataatgcaatatcaAGAGAGGAGACTGAAAATGCAAACCAGGAAGATGCAACAAACGTGTCAGACACAAGTTTTATAACAGTAAAATTAGAACCTATGGAATGTGTTGAAGATATATCGGACATTGCCCAGCCGATCACAGATATCATTGTCAAACAAGAATTCACTGAAGTACAAGTGAAAGTAGACATGCAAGATATGGGAAATCTAGACCATGAAATTAAAACTGAGCATTTTGAATACCCAGAGATGAGTTCACAGGGAGTTGAAAAGCTTGAATCTTGTGCTGAGGTATCAAGAAAAGAACATTCTGCTTTGACGGTTACCGAAAACAGTGTCGTAAAGCACACAAAACCCAAAATAACGAATCGTAAACCAAAACAAACGATTAAAAAAGAATTCGTTAAAAAATCGCACTCACAACCCAAAAGTAAATCTAAAGTcagtaataaaacattaaacgAAACTACGTTAAATTCTCCCGATCCACAAACGTTTGTCTCTAAAAGAATTCAAATTCCCCTGCGTTCGACGGATCCTGATGATCCGAAAACGGACGTGATCGAACTCGTGATCAAAAAAGAAATAGACCACGCTTCGAGTGACCTCGAGAAGTTCGCTTGCGACTTTTGCAGCTACGTCACTAACAGGCAAAAGTTTCTCGACACCCACTCCCTCTTGCACACCAAAGACGATATCAAAAGTATATTCCCATGTCCCCATTGCGACTACCTGACCAAGAACGAGAGCCATCTGCTCTGCCACATCAAAACTCACACTGGGGAGAAACCTTTCTCCTGCGAACTCTGTCAGTACAAGTGCGTGACCAGGAGTCATCTCGTCAATCATATGAGGACACACACTGGAGAGAAACCGTACTCCTGCTCGTACTGCCCATACAAATCTATCACAAAGGGCCATCTGGACAGGCACATAACCACTCACACTGGTGACAAACCCTTCGCCTGTAGCCATTGCGATTACAAATGCTCCCAGCGGTACATCTTGAACTCTCATATCAAGATCCATACTGGGACCAAGCCGTTCGCGTGCAGCATCTGCGATTATAGGGGTTTGAGGAAGGTGCATCTGACTCGGCACATGAAAACGCATACCGGCGAGAAACCTTTTACGTGCGACATCTGCCTGTACAGGTGTTCTACCAAGACGCGTTTGGGGAGACACATAACCACTCACATAGGGAAGAAGAGCTTCTCCTGCAGCCTTTGCGATTACAAGTGCGTCAGCAGGAGCTACCTGGCCAGTCACCAACGTACTCACACTAAAGAGAGGCAGTACACGTGCAAGTTTTGCGAGTTCAAGTGCGACCAGGAGGGCTCGTTGGCCGATCACGTTAAGTTGCACGCTGGCGAGAAACGTTTCTCGTGTGATCTCTGCGAGTACAGATGCACGCTGCGCCGCAGCCTCCGGGACCATATGCGCACTCACACCGGGGAGAAACCGTTCGAGTGCGACATCTGTTACACTAAATTTAGATTTAGGAAAACTAAAACCGAGCTATCGATGAACAACATAGAAGACCCAGCTTTATGCGTCGAAGTCAACATCACGCGTATGGAGTTACCACAAATTAAATATGAAGATATTaatgtatcaaatcaaaatgaagAGTATTCTCATGTAAACAGATATAACTTACAACAAAACGCACCTGCGGACACACTGAACGATGATAAACTCGATGTCCCAGAGTTATGGGATACCAACCTCGTGTGCAACCTTTGCCAATACGAAACTAAGATAAAGGATTTGATGAAAGACCATTTATTGACTCATATGGGCAAAGTTCATagcaaagaattattttgctcgTATAAAGTAAATCCTCCCAGAGCCTTCGACGTTAAAGCGATCGACACTGGTAGACTTCTCAAAAGAAAGAAGAAGCGTGATAATACTGCCGTTTTGGACGCTTTCATGAGAATCGAATCAGAGTTTTTTGTATGCAAAATTTGCTCGTTCGGTTGCAGGTCGAAGGATCGTTTAGCGACTCACTTAAGATCGCACGCCAAGAAGAAACCGTACTGCTGCGACATTTGCAACAGCAGATTCTCCGGTAGGACCGACCTGATCAGGCATTTGAGGATCCACACCGGAGAGAAACCGTTTTCCTGCACCCGGTGTCCCTATAAATCCTCTGTGAAGAGCAATCTGGTGACACACATGAGAGTTCACGGGGAGAAACTGTTCGCTTGCAGCTATTGCTCGGACAAGTTCACGAAAAAGAATCTACTGGTCACGCACATAATGAGTCACACCGGCGAGAGACCGCTATCGTGCGACCTCTGCCCGTACACGTGCGTGAAGAAGATCGATCTGAAGAGGCATACCAAAACTCACACTGCAGAGAAGCCGTTCTCGTGCCCTTTTTGCGAGTTTAAATGTCAGAAGAAGGGCAACTTGGACAATCATGTCAAGACCCATTCCGTCGACAAGCCTTACTCTTGTACCGTTTGCGACTACAGGTGCGTGAGCAAAAGTTATCTCTCCGGCCATATGAGCGTCCACGTCGCCGTGAAACCTTTCTGCTGCGCTCACTGCAACTACAAATCGGCGAAGAAGAGTTACTTAGTGAAACATATGAGAACGCATACTGGGGATAAGCCATTTTTGTGCAGTATTTGTCCTTATAAATCTGCGAACAAGCGTACTCTGACCAGTCATATGAGGATTCATACCGAAAACAGCCTGTACTCTTGCAATATATGCCATTACAACTGCACCAGGAAGGTGTATCTGACCAGGCACATGAAGAGTCACAGCGGGGACAAACCTTTCAGTTGCGTCATTTGCTCCGTCAGCTTTGCGAGAAAGAATACAATGTTCAGGCATATGAAGACTCATTCTAACGACAAACCGTTCTCGTGTAACCTCTGCCAATATAAATGCATACTCAAGGACCGTTTGATCACCCATATGAAGACCCATACCGGGGAAAGAGCCTACTCTTGCAATCTTTGCGACTACACGTCCAGCCACAAGTACGGGCTGGTTACTCATATGATCGTCCACGCGGACGGCAAAACCTATTCTACAAGTGGCAACATTATTAACATGCAAAAGAGAACTGTTTAG
Protein Sequence
MAQNILSSVGGKQMHYNDPVIEKSDLNNAISREETENANQEDATNVSDTSFITVKLEPMECVEDISDIAQPITDIIVKQEFTEVQVKVDMQDMGNLDHEIKTEHFEYPEMSSQGVEKLESCAEVSRKEHSALTVTENSVVKHTKPKITNRKPKQTIKKEFVKKSHSQPKSKSKVSNKTLNETTLNSPDPQTFVSKRIQIPLRSTDPDDPKTDVIELVIKKEIDHASSDLEKFACDFCSYVTNRQKFLDTHSLLHTKDDIKSIFPCPHCDYLTKNESHLLCHIKTHTGEKPFSCELCQYKCVTRSHLVNHMRTHTGEKPYSCSYCPYKSITKGHLDRHITTHTGDKPFACSHCDYKCSQRYILNSHIKIHTGTKPFACSICDYRGLRKVHLTRHMKTHTGEKPFTCDICLYRCSTKTRLGRHITTHIGKKSFSCSLCDYKCVSRSYLASHQRTHTKERQYTCKFCEFKCDQEGSLADHVKLHAGEKRFSCDLCEYRCTLRRSLRDHMRTHTGEKPFECDICYTKFRFRKTKTELSMNNIEDPALCVEVNITRMELPQIKYEDINVSNQNEEYSHVNRYNLQQNAPADTLNDDKLDVPELWDTNLVCNLCQYETKIKDLMKDHLLTHMGKVHSKELFCSYKVNPPRAFDVKAIDTGRLLKRKKKRDNTAVLDAFMRIESEFFVCKICSFGCRSKDRLATHLRSHAKKKPYCCDICNSRFSGRTDLIRHLRIHTGEKPFSCTRCPYKSSVKSNLVTHMRVHGEKLFACSYCSDKFTKKNLLVTHIMSHTGERPLSCDLCPYTCVKKIDLKRHTKTHTAEKPFSCPFCEFKCQKKGNLDNHVKTHSVDKPYSCTVCDYRCVSKSYLSGHMSVHVAVKPFCCAHCNYKSAKKSYLVKHMRTHTGDKPFLCSICPYKSANKRTLTSHMRIHTENSLYSCNICHYNCTRKVYLTRHMKSHSGDKPFSCVICSVSFARKNTMFRHMKTHSNDKPFSCNLCQYKCILKDRLITHMKTHTGERAYSCNLCDYTSSHKYGLVTHMIVHADGKTYSTSGNIINMQKRTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01017905;
90% Identity
-
80% Identity
-