Mach027941.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Morpho achilles
Gene Symbol
-
Assembly
GCA_947086495.1
Location
CAMTZB010000027.1:3577374-3587701[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.87 78 4.9 1.1 1 23 232 254 232 254 0.93
2 25 0.065 5.9 8.4 5.4 1 23 263 285 263 285 0.98
3 25 0.00014 0.013 16.8 5.6 1 23 291 313 291 313 0.98
4 25 0.00044 0.039 15.3 2.2 1 23 319 341 319 341 0.98
5 25 0.013 1.2 10.6 5.3 1 23 347 369 347 369 0.97
6 25 0.0036 0.33 12.4 2.4 1 23 375 397 375 397 0.97
7 25 0.004 0.36 12.3 3.9 1 23 403 425 403 425 0.98
8 25 9.8e-05 0.0088 17.3 2.8 1 23 431 453 431 453 0.98
9 25 0.082 7.4 8.1 0.8 1 23 459 481 459 481 0.98
10 25 0.0021 0.19 13.1 4.7 1 23 487 509 487 509 0.98
11 25 5.2e-05 0.0047 18.2 2.2 1 23 515 537 515 537 0.98
12 25 0.13 12 7.5 0.4 2 23 616 637 615 637 0.96
13 25 0.00063 0.057 14.8 2.2 1 23 689 711 689 711 0.98
14 25 9.1e-06 0.00083 20.6 1.4 1 23 717 739 717 739 0.98
15 25 8.7e-05 0.0079 17.5 1.0 1 23 745 767 745 767 0.98
16 25 0.0092 0.83 11.1 2.7 1 23 772 794 772 794 0.97
17 25 0.0013 0.12 13.8 2.4 2 23 801 822 800 822 0.97
18 25 0.012 1.1 10.7 3.5 1 23 828 850 828 850 0.98
19 25 0.00033 0.03 15.6 0.9 1 23 856 878 856 878 0.97
20 25 0.002 0.18 13.2 6.5 1 23 884 906 884 906 0.97
21 25 0.0022 0.2 13.0 1.5 1 23 912 934 912 934 0.95
22 25 0.00044 0.04 15.3 9.5 1 23 940 962 940 962 0.98
23 25 8.5e-05 0.0077 17.5 1.6 1 23 968 990 968 990 0.99
24 25 0.017 1.5 10.3 3.7 1 23 997 1019 997 1019 0.98
25 25 0.00064 0.058 14.8 0.4 1 23 1025 1047 1025 1047 0.97

Sequence Information

Coding Sequence
ATGGCTCAAAACATCTCTAGTGGTGTGGGAGGTAAACAAATGCATTATAATGTGTCCGTGATAGAGAAATCAGACGTCAATGATGTGATATCAAGAGAGGAAGATGCAATGAATGTGGTTGACTCAAGGATTATAACAGTAAAATTGGAACCAATGGACAGTGGTGAAGCACAGAATGATGATGTAACAGATGTACAACCTATAACAAATGTTGTTGTTAAGCAAGAATTCACTGAAGTACAAATAAAAGTAGACATGCAGGATGATGGGAATACGGATGATGAAATCAAAACTGAGCATTACGATGGCCAAGAGATAACTTCACAAGATGTTAAAAAGCACGAATCTTGTGCCGAGATATCAAGAATTGGAAACAAAAAAGGAAATTCGGCTTTGACGATTACCGAATACGACAGTGACGTAACACACACGAAAGCCCAAAAAACGCCCGCCAAAACTAATCTTAAACCCAAACAAACGATTAACAAATCCGTTCAACACTTGCacaaaattaaaactgaagTCAATCAAATATCAAACGAAACTCCTCCGTCAAATTTTCCCGATCCACAAAGTTTTGTCTCTAAAAGAATCCAAATTCCTTTGCGATCGGCCGATCCGAAGGAAACTAAAACCGACGTCATAGAACTCgtgattaaaaaagaaatagacgCTTCGAACGACCTCGAGAAATTCGCCTGCGACTTTTGCAGCTACGTCACTAACAGGCAGAAGTTTCTGGACACTCATTCCCTCTTGCACACGAAAGACGATATCAAAATCATATTCCCTTGTCCTCATTGCGACTATCTGACCAAGAACGAGAGCCACCTGCTTTGCCACATCAAAACTCATACTGGAGAGAAACCCTTCTCCTGCGAGCTCTGCCAGTACAAGTGCGTGACCAGGAGTCACTTAGTCAACCATATGAGGACGCATACAGGCGAAAAGCCTTACTCCTGCTCGTACTGTCCGTACAAATCTATAACAAAAGGGCATCTGGACAGGCACATAACAACTCACACGGGCGATAAACCTTTCGCCTGTACCCATTGCGATTACAAATGCTCCCAGCGTTACATTTTAAACTCTCACATGAAGATCCACACTGGAACCAAACCGTTTCCGTGCAGTTTATGCGATTATAGGGGCTTGAGGAAGGTGCATTTGACGAGGCACATGAAAACTCATACTGGCGAGAAACCGTTCACCTGCGATATATGCCAGTACAGATGCTCCACTAAGACTCGTTTGGGGAGACACATAACCACTCACGTAGGGAAAAAGAGCTTTGTCTGCAGCCTCTGCGATTACAAGTGCGTTAGCAGGAGCTACCTGGCCAGTCACCAACGCACTCACACTAAAGAGAGGCTGTACATTTGCAAGTTTTGCGAGTTCAAGTGCGACCAGGAGGGCTTGTTGGCAGAACATGTCAAAATACACGCTGGGGAGAAGCGTTTCTCGTGTAATCTCTGCGAGTACAAATGCACGCTGCGCCGCAGTCTCCGGGATCATATGCGCACGCATACTGGAGAGAAGCCGTTCGAGTGCGACATCTGTTACACTAAATTTAGATTTAGGAGTAATTTGTTCGCGCACAGGAAAATTCATACTGaaACAATATACGATGTATCGACGGACATTCAAGATCCAGCTTTATGCGTCGAAGTTAACATAACACGTATGGATATACCACAAGTTAAATCTGAAgatttatcaaatcaaaatgaatATATGGATACACATTTGTCTAATATAAACGAATATGATGCACATTTAAACACAGTTACAAACCCACTAACTGACATGAAACCTGATGTCTCAGAGTTATGGAATACTAACCTCGTATGCAACCTTTGCAAATACGAAACTAAAGTGAAAGAATTAATGAAAGACCATTTACTGTCTCATATGGGCAAAGTTCATAGCAAACATCTATTTTGCTCCTATAAAGTAAATCCTAATGCTTTAGATGTTAAAAGGATTGATACAGGACTTAAAAGAAAGCAGAAACGCGATAAGAGTACTGCGTTAGACGCTTTCATGAGAATCGAGTCAGAGTTTTTCGTATGCAACATTTGCCAGTTCGGTTGCACGTCGAAGGATCGCTTGGCGACGCATTTAAGGACTCATGCGAAGAAGAAACCATTTTCCTGCAACACTTGCAACAGAAAATTCTCCGGTAGGACTGATTTAATCAGGCATTTGCGGATCCATACAGGAGAGAAGCCGTTTTCTTGCACTCGGTGTCCTTATAAATCTTCAGTGAAGAGCAATTTGGTGACTCATATGCGAGTGCACGGGGAGAAACTGTTTGCGTGCAGCTACTGTTCGGACAAGTTCACGAAAAAGCATCTATTAGTCACGCACATAATGAGTCATACGGGAGAGAGGCCGCTGTCTTGCGAACTCTGCCCGTACACGTGCGTTAAGAAGATAGATTTGAAGAGGCACACTAAAACTCATACTGAGGAGAAGCCGTTTTCTTGTCCGTTTTGCGAGTTCAAATGTCAGAAAAAGGGCAACTTGGACAACCATATCAAAACGCATTCAGTCGAGAAACCTTACGCTTGCGATATATGCGACTACAAATGTGTGAGCAAGAGTTACCTATCCGGTCACATGAGCGTCCATATCGCTGTCAAACCTTTCTGCTGCGCTCACTGCAACTACAAATCTGCTAAGAAGAGTTACTTAGTGAAGCATATGCGAACGCATACTGGAGATAAACCGTTTTTGTGCAGCCTTTGCTCTTATAAATCTGCGAATAAGAGAACTCTGACCAGCCATATGAGAATCCATACGGAAAACAGTCTGTATTCGTGTCATATCTGCCACTATAATTGCACAAGAAAGGTTTATTTGACAAGGCACATGAAGAGCCATAGCGGGGTTAAACCTTTCACATGCGTCATTTGCTCTGTGAGCTTCGCGAGGAAGAATACCATGTACAGACACATGAAGACCCATCAGCCCGATGACAAACCCTTCTCCTGTAATCTCTGCCAGTATAAATGTATACTCAAGGACCGGTTGATCACCCACATGAAAACCCATACGGGTGAGAGAGCGTACGCTTGCAATCTGTGCGATTACACCGCCAGCCACAAGTATGGCTTAGTTACTCACATGATCGTCCACGCGGATGGCAAAAATTATTCAACCAGtggcaatataataaatatgcaaaAGAGAACTGTTTAA
Protein Sequence
MAQNISSGVGGKQMHYNVSVIEKSDVNDVISREEDAMNVVDSRIITVKLEPMDSGEAQNDDVTDVQPITNVVVKQEFTEVQIKVDMQDDGNTDDEIKTEHYDGQEITSQDVKKHESCAEISRIGNKKGNSALTITEYDSDVTHTKAQKTPAKTNLKPKQTINKSVQHLHKIKTEVNQISNETPPSNFPDPQSFVSKRIQIPLRSADPKETKTDVIELVIKKEIDASNDLEKFACDFCSYVTNRQKFLDTHSLLHTKDDIKIIFPCPHCDYLTKNESHLLCHIKTHTGEKPFSCELCQYKCVTRSHLVNHMRTHTGEKPYSCSYCPYKSITKGHLDRHITTHTGDKPFACTHCDYKCSQRYILNSHMKIHTGTKPFPCSLCDYRGLRKVHLTRHMKTHTGEKPFTCDICQYRCSTKTRLGRHITTHVGKKSFVCSLCDYKCVSRSYLASHQRTHTKERLYICKFCEFKCDQEGLLAEHVKIHAGEKRFSCNLCEYKCTLRRSLRDHMRTHTGEKPFECDICYTKFRFRSNLFAHRKIHTETIYDVSTDIQDPALCVEVNITRMDIPQVKSEDLSNQNEYMDTHLSNINEYDAHLNTVTNPLTDMKPDVSELWNTNLVCNLCKYETKVKELMKDHLLSHMGKVHSKHLFCSYKVNPNALDVKRIDTGLKRKQKRDKSTALDAFMRIESEFFVCNICQFGCTSKDRLATHLRTHAKKKPFSCNTCNRKFSGRTDLIRHLRIHTGEKPFSCTRCPYKSSVKSNLVTHMRVHGEKLFACSYCSDKFTKKHLLVTHIMSHTGERPLSCELCPYTCVKKIDLKRHTKTHTEEKPFSCPFCEFKCQKKGNLDNHIKTHSVEKPYACDICDYKCVSKSYLSGHMSVHIAVKPFCCAHCNYKSAKKSYLVKHMRTHTGDKPFLCSLCSYKSANKRTLTSHMRIHTENSLYSCHICHYNCTRKVYLTRHMKSHSGVKPFTCVICSVSFARKNTMYRHMKTHQPDDKPFSCNLCQYKCILKDRLITHMKTHTGERAYACNLCDYTASHKYGLVTHMIVHADGKNYSTSGNIINMQKRTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01018757;
90% Identity
-
80% Identity
-